Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G8.6 Capsicum annuum HOM05D003926 ORTHO05D010611 8.3e-154 547.0 270 100.0
CAN.G497.55 Capsicum annuum HOM05D003926 ORTHO05D005273 5.4e-52 208.8 230 54.3
Solyc02g089260.4 Solanum lycopersicum HOM05D003926 ORTHO05D005273 2.9e-50 203.0 227 52.9
Sopen02g034050 Solanum pennellii HOM05D003926 ORTHO05D005273 2.9e-50 203.0 227 52.9
Nitab4.5_0009887g0010 Nicotiana tabacum HOM05D003926 ORTHO05D005273 3.3e-33 146.4 175 49.7
Nitab4.5_0001339g0050 Nicotiana tabacum HOM05D003926 ORTHO05D005273 1.6e-32 144.1 207 44.4
Haze_14378 Corylus avellana HOM05D003926 ORTHO05D005273 3.0e-26 123.2 198 39.9
Actinidia18083 Actinidia chinensis HOM05D003926 ORTHO05D005273 3.9e-26 122.9 199 37.7
Cfa007698 Carpinus fangiana HOM05D003926 ORTHO05D005273 1.1e-25 121.3 198 39.4
CAN.G234.11 Capsicum annuum HOM05D000198 ORTHO05D003365 1.9e-25 120.6 80 71.2
Dinv33869 Davidia involucrata HOM05D003926 ORTHO05D005273 1.9e-25 120.6 222 37.8
Rhsim10G0059600 Rhododendron simsii HOM05D003926 ORTHO05D005273 1.9e-25 120.6 195 40.5
GSVIVG01036538001 Vitis vinifera HOM05D003926 ORTHO05D005273 2.5e-25 120.2 219 37.0
CiPaw.03G082600 Carya illinoinensis HOM05D003926 ORTHO05D005273 3.3e-25 119.8 222 36.9
Dinv34905 Davidia involucrata HOM05D003926 ORTHO05D005273 3.3e-25 119.8 223 35.9
ECA232G4780 Erigeron canadensis HOM05D003926 ORTHO05D005273 7.3e-25 118.6 191 39.8
Ah.16g101010 Amaranthus hybridus HOM05D003926 ORTHO05D005273 1.6e-24 117.5 197 40.1
Potri.017G101100 Populus trichocarpa HOM05D003926 ORTHO05D005273 1.6e-24 117.5 223 35.4
Manes.02G059900 Manihot esculenta HOM05D003926 ORTHO05D005273 2.1e-24 117.1 223 33.2
CSS0002647 Camellia sinensis var. sinensis HOM05D003926 ORTHO05D005273 2.8e-24 116.7 197 38.6
CSS0025257 Camellia sinensis var. sinensis HOM05D003926 ORTHO05D005273 2.8e-24 116.7 197 38.6
FvH4_6g46320 Fragaria vesca HOM05D003926 ORTHO05D005273 2.8e-24 116.7 198 36.9
Phvul.008G025700 Phaseolus vulgaris HOM05D003926 ORTHO05D005273 6.2e-24 115.5 200 39.0
HanXRQChr15g0464821 Helianthus annuus HOM05D003926 ORTHO05D005273 8.1e-24 115.2 199 37.7
Lsat_1_v5_gn_4_173381 Lactuca sativa HOM05D003926 ORTHO05D005273 8.1e-24 115.2 185 37.8
arahy.Tifrunner.gnm1.ann1.FDTJ9Q Arachis hypogaea HOM05D003926 ORTHO05D005273 1.1e-23 114.8 200 39.5
AUR62023153 Chenopodium quinoa HOM05D003926 ORTHO05D005273 1.8e-23 114.0 199 39.2
Prupe.3G248400 Prunus persica HOM05D003926 ORTHO05D005273 4.0e-23 112.8 198 37.4
arahy.Tifrunner.gnm1.ann1.DT5ZWB Arachis hypogaea HOM05D003926 ORTHO05D005273 5.2e-23 112.5 200 39.0
arahy.Tifrunner.gnm1.ann1.IQIT5J Arachis hypogaea HOM05D003926 ORTHO05D005273 5.2e-23 112.5 200 39.0
Atru.chr8.620 Acer truncatum HOM05D003926 ORTHO05D005273 6.8e-23 112.1 198 37.9
MD17G1066300 Malus domestica HOM05D003926 ORTHO05D005273 6.8e-23 112.1 198 36.9
RcHm_v2.0_Chr2g0164791 Rosa chinensis HOM05D003926 ORTHO05D005273 6.8e-23 112.1 198 36.4
AUR62009475 Chenopodium quinoa HOM05D003926 ORTHO05D005273 8.9e-23 111.7 199 38.7
vmacro05611 Vaccinium macrocarpon HOM05D003926 ORTHO05D005273 1.2e-22 111.3 193 37.8
Ciclev10010885m.g Citrus clementina HOM05D003926 ORTHO05D005273 1.5e-22 110.9 199 37.2
FAN09G1503 Fragaria x ananassa HOM05D003926 ORTHO05D005273 1.5e-22 110.9 198 36.4
MD09G1075600 Malus domestica HOM05D003926 ORTHO05D005273 2.0e-22 110.5 198 35.9
Sc14g0004890 Simmondsia chinensis HOM05D003926 ORTHO05D005273 2.6e-22 110.2 201 36.8
TAR374G0863 Trochodendron aralioides HOM05D003926 ORTHO05D005273 3.4e-22 109.8 221 35.7
QL02p065183 Quercus lobata HOM05D003926 ORTHO05D005273 5.8e-22 109.0 225 33.3
Glyma.08G252600 Glycine max HOM05D003926 ORTHO05D005273 9.8e-22 108.2 201 36.8
Duzib211G0130 Durio zibethinus HOM05D003926 ORTHO05D005273 1.3e-21 107.8 198 34.8
Thecc.04G107500 Theobroma cacao HOM05D003926 ORTHO05D005273 1.7e-21 107.5 196 37.2
EL10Ac2g04434 Beta vulgaris HOM05D003926 ORTHO05D005273 2.2e-21 107.1 197 36.5
CAN.G388.75 Capsicum annuum HOM05D008574 ORTHO05D010611 2.2e-21 107.1 104 55.8
Cc07_g04520 Coffea canephora HOM05D003926 ORTHO05D005273 2.2e-21 107.1 193 38.3
Gohir.A07G178901 Gossypium hirsutum HOM05D003926 ORTHO05D005273 2.2e-21 107.1 196 34.2
Gorai.001G206500 Gossypium raimondii HOM05D003926 ORTHO05D005273 2.2e-21 107.1 196 35.2
Migut.H00584 Erythranthe guttata HOM05D003926 ORTHO05D005273 2.9e-21 106.7 225 34.2
Glyma.18G275200 Glycine max HOM05D003926 ORTHO05D005273 3.7e-21 106.3 201 35.3
Gohir.A07G179100 Gossypium hirsutum HOM05D003926 ORTHO05D005273 3.7e-21 106.3 196 34.2
Lj4C124T8 Lonicera japonica HOM05D003926 ORTHO05D005273 3.7e-21 106.3 221 34.4
ClCG11G004990 Citrullus lanatus HOM05D003926 ORTHO05D005273 4.9e-21 105.9 196 36.2
Hund16238 Selenicereus undatus HOM05D003926 ORTHO05D005273 4.9e-21 105.9 198 35.4
DCAR_011007 Daucus carota HOM05D003926 ORTHO05D005273 6.4e-21 105.5 197 39.6
Duzib133G0169 Durio zibethinus HOM05D003926 ORTHO05D005273 6.4e-21 105.5 197 38.1
TAR622G1093 Trochodendron aralioides HOM05D003926 ORTHO05D005273 1.1e-20 104.8 220 35.5
MELO3C022053.2 Cucumis melo HOM05D003926 ORTHO05D005273 1.9e-20 104.0 196 35.7
CAN.G79.92 Capsicum annuum HOM05D008574 ORTHO05D010611 3.2e-20 103.2 158 41.1
CsaV3_5G038720 Cucumis sativus L. HOM05D003926 ORTHO05D005273 3.2e-20 103.2 196 35.7
Sabra17G0086900 Salix brachista HOM05D003926 ORTHO05D005273 4.1e-20 102.8 224 33.0
Nn3g17538 Nelumbo nucifera HOM05D003926 ORTHO05D005273 5.4e-20 102.4 199 38.2
TPR.G23405 Trifolium pratense HOM05D003926 ORTHO05D005273 9.2e-20 101.7 201 36.3
PSO782G5674 Papaver somniferum HOM05D003926 ORTHO05D005273 1.2e-19 101.3 202 37.1
Lalb_Chr21g0318281 Lupinus albus HOM05D003926 ORTHO05D005273 1.6e-19 100.9 201 34.8
MBI15_g05000_MAGBIO Magnolia biondii HOM05D003926 ORTHO05D005273 1.6e-19 100.9 222 32.4
Medtr7g017100 Medicago truncatula HOM05D003926 ORTHO05D005273 3.5e-19 99.8 201 33.8
PSO063G5950 Papaver somniferum HOM05D003926 ORTHO05D005273 6.0e-19 99.0 202 36.6
Peaxi162Scf00020g02344 Petunia axillaris HOM05D003926 ORTHO05D005273 6.0e-19 99.0 166 41.6
Sed0020046 Sechium edule HOM05D003926 ORTHO05D005273 7.8e-19 98.6 199 34.2
Lj1g0024205 Lotus japonicus HOM05D003926 ORTHO05D005273 1.0e-18 98.2 201 35.3
Psat3g203080 Pisum sativum HOM05D003926 ORTHO05D005273 1.7e-18 97.4 201 35.3
Aqoxy3G03752 Aquilegia oxysepala HOM05D003926 ORTHO05D005273 2.3e-18 97.1 195 35.4
CANSAT64G0948 Cannabis sativa HOM05D003926 ORTHO05D005273 5.1e-18 95.9 203 33.5
Lalb_Chr06g0174881 Lupinus albus HOM05D003926 ORTHO05D005273 5.1e-18 95.9 203 34.0
TWI32G0285 Tripterygium wilfordii HOM05D003926 ORTHO05D005273 5.1e-18 95.9 196 34.2
CAN.G997.9 Capsicum annuum HOM05D008574 ORTHO05D010611 6.6e-18 95.5 59 74.6
MSTRG.23855 Avicennia marina HOM05D003926 ORTHO05D005273 8.6e-18 95.1 193 34.7
Ca_06914_v3 Cicer arietinum L. HOM05D003926 ORTHO05D005273 1.1e-17 94.7 201 33.8
Ca_06916_v3 Cicer arietinum L. HOM05D003926 ORTHO05D005273 1.1e-17 94.7 201 33.8
Carub.0003s0138 Capsella rubella HOM05D003926 ORTHO05D005273 1.9e-17 94.0 197 33.5
AL3G11530 Arabidopsis lyrata HOM05D003926 ORTHO05D005273 3.3e-17 93.2 224 33.0
CAN.G151.31 Capsicum annuum HOM05D008574 ORTHO05D010611 5.6e-17 92.4 153 39.2
AT3G02260 Arabidopsis thaliana HOM05D003926 ORTHO05D005273 1.2e-16 91.3 224 30.8
Peaxi162Scf00008g00018 Petunia axillaris HOM05D008574 ORTHO05D010611 1.2e-16 91.3 87 51.7
Peaxi162Scf00002g00292 Petunia axillaris HOM05D008574 ORTHO05D010611 2.1e-16 90.5 94 48.9
THA.LOC104802985 Tarenaya hassleriana HOM05D003926 ORTHO05D005273 2.1e-16 90.5 224 31.7
SGA_v2.0_scaffold52G19072 Striga asiatica HOM05D003926 ORTHO05D005273 6.2e-16 89.0 226 30.5
Thhalv10019869m.g Eutrema salsugineum HOM05D003926 ORTHO05D005273 8.1e-16 88.6 197 33.0
Aa31LG5G12790 Aethionema arabicum HOM05D003926 ORTHO05D005273 1.1e-15 88.2 197 31.5
PGR004G0818 Punica granatum HOM05D003926 ORTHO05D005273 1.4e-15 87.8 193 32.6
A05p45150 Brassica napus HOM05D003926 ORTHO05D005273 2.3e-15 87.0 197 31.5
BraA05t23147Z Brassica rapa HOM05D003926 ORTHO05D005273 2.3e-15 87.0 197 31.5
CARHR076230 Cardamine hirsuta HOM05D003926 ORTHO05D005273 2.3e-15 87.0 196 32.7
BolC5t35094H Brassica oleracea HOM05D003926 ORTHO05D005273 3.1e-15 86.7 197 31.5
C09p75640 Brassica napus HOM05D003926 ORTHO05D005273 4.0e-15 86.3 197 31.5
CAN.G410.12 Capsicum annuum HOM05D008574 ORTHO05D010611 4.0e-15 86.3 41 92.7
Sp3g01330 Schrenkiella parvula HOM05D003926 ORTHO05D005273 8.9e-15 85.1 197 31.5
HPP92_020588 Vanilla planifolia HOM05D003926 ORTHO05D005273 2.7e-11 73.6 196 32.1
ATR1101G059 Amborella trichopoda HOM05D003926 ORTHO05D005273 8.6e-10 68.6 201 31.8
CAN.G15.3 Capsicum annuum HOM05D008574 ORTHO05D010611 1.1e-09 68.2 40 72.5
ATR0691G267 Amborella trichopoda HOM05D003926 ORTHO05D005273 5.6e-09 65.9 201 31.3
CAN.G100.6 Capsicum annuum HOM05D008574 ORTHO05D010611 3.6e-08 63.2 55 60.0
Os09g0247700 Oryza sativa ssp. japonica HOM05D003926 ORTHO05D005273 1.1e-07 61.6 197 29.4
SHI25820 Sapria himalayana HOM05D003926 ORTHO05D005273 1.4e-07 61.2 102 37.3
CAN.G348.6 Capsicum annuum HOM05D005504 ORTHO05D010611 2.6e-06 57.0 137 31.4
SEGI_07483 Sequoiadendron giganteum HOM05D003926 ORTHO05D005273 9.9e-06 55.1 104 35.6


User provided reference genes

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