Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G781.11 Capsicum annuum HOM05D003618 ORTHO05D004302 2.0e-186 655.6 328 100.0
Solyc03g114340.3 Solanum lycopersicum HOM05D003618 ORTHO05D004302 7.9e-183 643.7 328 97.9
Sopen03g033440 Solanum pennellii HOM05D003618 ORTHO05D004302 7.9e-183 643.7 328 97.9
Peaxi162Scf00017g02915 Petunia axillaris HOM05D003618 ORTHO05D004302 3.9e-182 641.3 328 97.0
Nitab4.5_0007719g0010 Nicotiana tabacum HOM05D003618 ORTHO05D004302 5.1e-182 641.0 328 96.6
Nitab4.5_0009783g0020 Nicotiana tabacum HOM05D003618 ORTHO05D004302 1.9e-181 639.0 328 96.3
MSTRG.23128 Avicennia marina HOM05D003618 ORTHO05D004302 5.0e-177 624.4 328 92.4
Gorai.006G189200 Gossypium raimondii HOM05D003618 ORTHO05D004302 3.2e-176 621.7 328 93.3
Gohir.A09G171800 Gossypium hirsutum HOM05D003618 ORTHO05D004302 4.2e-176 621.3 328 93.0
Gohir.D09G167500 Gossypium hirsutum HOM05D003618 ORTHO05D004302 7.2e-176 620.5 328 92.7
Oeu035988.1 Olea europaea HOM05D003618 ORTHO05D004302 7.2e-176 620.5 328 93.3
Thecc.03G012400 Theobroma cacao HOM05D003618 ORTHO05D004302 1.2e-175 619.8 324 93.8
Actinidia19319 Actinidia chinensis HOM05D003618 ORTHO05D004302 6.1e-175 617.5 328 92.7
Manes.14G065900 Manihot esculenta HOM05D003618 ORTHO05D004302 6.1e-175 617.5 328 91.8
MSTRG.11450 Avicennia marina HOM05D003618 ORTHO05D004302 7.9e-175 617.1 328 92.1
Eucgr.B00316 Eucalyptus grandis HOM05D003618 ORTHO05D004302 7.9e-175 617.1 328 92.1
CSS0045852 Camellia sinensis var. sinensis HOM05D003618 ORTHO05D004302 1.4e-174 616.3 328 92.1
Oeu040829.1 Olea europaea HOM05D003618 ORTHO05D004302 1.4e-174 616.3 326 92.9
Cfa019131 Carpinus fangiana HOM05D003618 ORTHO05D004302 1.8e-174 615.9 328 92.4
COL.COLO4_30036 Corchorus olitorius HOM05D003618 ORTHO05D004302 1.8e-174 615.9 325 92.9
Nn4g22770 Nelumbo nucifera HOM05D003618 ORTHO05D004302 1.8e-174 615.9 327 92.0
SGA_v2.0_scaffold90G27940 Striga asiatica HOM05D003618 ORTHO05D004302 1.8e-174 615.9 328 91.5
Migut.I00013 Erythranthe guttata HOM05D003618 ORTHO05D004302 2.3e-174 615.5 328 91.8
Duzib205G1198 Durio zibethinus HOM05D003618 ORTHO05D004302 3.0e-174 615.1 328 92.4
MD14G1180500 Malus domestica HOM05D003618 ORTHO05D004302 3.9e-174 614.8 328 91.5
Prupe.5G174000 Prunus persica HOM05D003618 ORTHO05D004302 1.1e-173 613.2 328 91.8
Zm00001eb126690 Zea mays HOM05D003618 ORTHO05D004302 1.1e-173 613.2 323 92.9
RcHm_v2.0_Chr7g0193571 Rosa chinensis HOM05D003618 ORTHO05D004302 1.5e-173 612.8 328 90.9
Haze_07469 Corylus avellana HOM05D003618 ORTHO05D004302 2.0e-173 612.5 328 91.8
FAN04G2056 Fragaria x ananassa HOM05D003618 ORTHO05D004302 2.0e-173 612.5 328 90.9
MD06G1174000 Malus domestica HOM05D003618 ORTHO05D004302 2.0e-173 612.5 328 90.9
FvH4_5g05300 Fragaria vesca HOM05D003618 ORTHO05D004302 2.5e-173 612.1 328 90.9
FAN18G3775 Fragaria x ananassa HOM05D003618 ORTHO05D004302 2.5e-173 612.1 328 90.9
ClCG06G017010 Citrullus lanatus HOM05D003618 ORTHO05D004302 3.3e-173 611.7 324 90.4
Cc04_g14010 Coffea canephora HOM05D003618 ORTHO05D004302 3.3e-173 611.7 328 90.2
Manes.06G104700 Manihot esculenta HOM05D003618 ORTHO05D004302 3.3e-173 611.7 328 91.5
Os01g0106900 Oryza sativa ssp. japonica HOM05D003618 ORTHO05D004302 3.3e-173 611.7 325 92.0
Potri.015G076200 Populus trichocarpa HOM05D003618 ORTHO05D004302 3.3e-173 611.7 328 91.2
Duzib068G0560 Durio zibethinus HOM05D003618 ORTHO05D004302 4.3e-173 611.3 323 92.6
FAN13G0153 Fragaria x ananassa HOM05D003618 ORTHO05D004302 4.3e-173 611.3 328 90.5
PGR083G1520 Punica granatum HOM05D003618 ORTHO05D004302 4.3e-173 611.3 328 90.5
MELO3C026292.2 Cucumis melo HOM05D003618 ORTHO05D004302 7.4e-173 610.5 324 90.4
FAN18G3061 Fragaria x ananassa HOM05D003618 ORTHO05D004302 7.4e-173 610.5 328 90.2
Gohir.A11G001200 Gossypium hirsutum HOM05D003618 ORTHO05D004302 9.7e-173 610.1 325 92.6
FAN08G0480 Fragaria x ananassa HOM05D003618 ORTHO05D004302 1.3e-172 609.8 328 90.5
CsaV3_1G001500 Cucumis sativus L. HOM05D003618 ORTHO05D004302 1.7e-172 609.4 324 90.1
Aqoxy3G02948 Aquilegia oxysepala HOM05D003618 ORTHO05D004302 2.2e-172 609.0 323 92.0
Cpa.g.sc76.64 Carica papaya HOM05D003618 ORTHO05D004302 2.2e-172 609.0 323 92.3
Potri.012G080900 Populus trichocarpa HOM05D003618 ORTHO05D004302 3.7e-172 608.2 328 90.2
TAR622G0131 Trochodendron aralioides HOM05D003618 ORTHO05D004302 3.7e-172 608.2 323 92.3
Sabra15G0101400 Salix brachista HOM05D003618 ORTHO05D004302 4.8e-172 607.8 328 90.5
VMungo1215G2328 Vigna mungo HOM05D003618 ORTHO05D004302 4.8e-172 607.8 328 89.9
HPP92_004862 Vanilla planifolia HOM05D003618 ORTHO05D004302 6.3e-172 607.4 327 90.8
Sp2g25950 Schrenkiella parvula HOM05D003618 ORTHO05D004302 1.1e-171 606.7 324 90.7
TAR629G0089 Trochodendron aralioides HOM05D003618 ORTHO05D004302 1.1e-171 606.7 328 91.2
Thhalv10004122m.g Eutrema salsugineum HOM05D003618 ORTHO05D004302 1.4e-171 606.3 324 90.7
QL10p011706 Quercus lobata HOM05D003618 ORTHO05D004302 1.4e-171 606.3 326 90.5
GSVIVG01007752001 Vitis vinifera HOM05D003618 ORTHO05D004302 1.4e-171 606.3 323 91.3
arahy.Tifrunner.gnm1.ann1.2KV8GB Arachis hypogaea HOM05D003618 ORTHO05D004302 2.4e-171 605.5 324 90.7
arahy.Tifrunner.gnm1.ann1.9FL7A6 Arachis hypogaea HOM05D003618 ORTHO05D004302 2.4e-171 605.5 324 90.7
BraA09t36436Z Brassica rapa HOM05D003618 ORTHO05D004302 2.4e-171 605.5 324 90.4
Sed0011107 Sechium edule HOM05D003618 ORTHO05D004302 2.4e-171 605.5 320 90.9
DCAR_026133 Daucus carota HOM05D003618 ORTHO05D004302 3.1e-171 605.1 328 89.9
vmacro19385 Vaccinium macrocarpon HOM05D003618 ORTHO05D004302 3.1e-171 605.1 343 88.0
Sed0001158 Sechium edule HOM05D003618 ORTHO05D004302 4.1e-171 604.7 329 88.8
unitig_0.g1445 Utricularia gibba HOM05D003618 ORTHO05D004302 4.1e-171 604.7 331 90.3
ECA232G0993 Erigeron canadensis HOM05D003618 ORTHO05D004302 5.3e-171 604.4 325 91.1
Glyma.05G037500 Glycine max HOM05D003618 ORTHO05D004302 5.3e-171 604.4 328 89.6
Phvul.003G200300 Phaseolus vulgaris HOM05D003618 ORTHO05D004302 5.3e-171 604.4 328 89.3
ATR0730G147 Amborella trichopoda HOM05D003618 ORTHO05D004302 6.9e-171 604.0 323 92.0
BcaC04g23393 Brassica carinata HOM05D003618 ORTHO05D004302 6.9e-171 604.0 324 90.1
BcaNung01381 Brassica carinata HOM05D003618 ORTHO05D004302 6.9e-171 604.0 324 90.1
A09p07850 Brassica napus HOM05D003618 ORTHO05D004302 6.9e-171 604.0 324 90.1
C09p08850 Brassica napus HOM05D003618 ORTHO05D004302 6.9e-171 604.0 324 90.1
BolC9t53797H Brassica oleracea HOM05D003618 ORTHO05D004302 6.9e-171 604.0 324 90.1
BcaB02g09693 Brassica carinata HOM05D003618 ORTHO05D004302 9.1e-171 603.6 324 90.1
SalBow5G0347 Salvia bowleyana HOM05D003618 ORTHO05D004302 9.1e-171 603.6 327 91.4
SalBow5G5681 Salvia bowleyana HOM05D003618 ORTHO05D004302 9.1e-171 603.6 327 91.4
Dinv20656 Davidia involucrata HOM05D003618 ORTHO05D004302 1.2e-170 603.2 328 90.9
Medtr4g106870 Medicago truncatula HOM05D003618 ORTHO05D004302 1.2e-170 603.2 328 88.7
Carub.0008s2351 Capsella rubella HOM05D003618 ORTHO05D004302 1.5e-170 602.8 324 89.8
AL8G39750 Arabidopsis lyrata HOM05D003618 ORTHO05D004302 2.0e-170 602.4 324 89.5
BcaC01g02522 Brassica carinata HOM05D003618 ORTHO05D004302 2.0e-170 602.4 324 89.8
A06p29560 Brassica napus HOM05D003618 ORTHO05D004302 2.0e-170 602.4 324 89.8
C03p63940 Brassica napus HOM05D003618 ORTHO05D004302 2.0e-170 602.4 324 89.8
BolC3t18648H Brassica oleracea HOM05D003618 ORTHO05D004302 2.0e-170 602.4 324 89.8
BraA06t25902Z Brassica rapa HOM05D003618 ORTHO05D004302 2.0e-170 602.4 324 89.8
CDE07G0194 Ceratophyllum demersum HOM05D003618 ORTHO05D004302 2.0e-170 602.4 321 91.9
PSO455G0039 Papaver somniferum HOM05D003618 ORTHO05D004302 2.0e-170 602.4 322 90.7
THA.LOC104818235 Tarenaya hassleriana HOM05D003618 ORTHO05D004302 2.6e-170 602.1 324 90.7
CiPaw.11G026400 Carya illinoinensis HOM05D003618 ORTHO05D004302 3.4e-170 601.7 324 90.7
PSO170G5081 Papaver somniferum HOM05D003618 ORTHO05D004302 5.9e-170 600.9 322 91.0
TPR.G37486 Trifolium pratense HOM05D003618 ORTHO05D004302 7.7e-170 600.5 323 89.5
CARHR276570 Cardamine hirsuta HOM05D003618 ORTHO05D004302 1.0e-169 600.1 324 89.5
Gorai.007G001700 Gossypium raimondii HOM05D003618 ORTHO05D004302 1.3e-169 599.7 320 91.9
AT5G62790 Arabidopsis thaliana HOM05D003618 ORTHO05D004302 2.2e-169 599.0 324 89.5
TWI14G0558 Tripterygium wilfordii HOM05D003618 ORTHO05D004302 3.8e-169 598.2 327 89.3
HanXRQChr05g0153451 Helianthus annuus HOM05D003618 ORTHO05D004302 5.0e-169 597.8 320 90.0
Lj5A124T67 Lonicera japonica HOM05D003618 ORTHO05D004302 5.0e-169 597.8 328 89.9
Lj4g0012807 Lotus japonicus HOM05D003618 ORTHO05D004302 1.4e-168 596.3 324 88.6
Hund02742 Selenicereus undatus HOM05D003618 ORTHO05D004302 1.4e-168 596.3 324 90.4
Ca_21917_v3 Cicer arietinum L. HOM05D003618 ORTHO05D004302 2.5e-168 595.5 324 88.6
SEGI_37686 Sequoiadendron giganteum HOM05D003618 ORTHO05D004302 3.2e-168 595.1 327 90.2
Rhsim08G0171900 Rhododendron simsii HOM05D003618 ORTHO05D004302 7.2e-168 594.0 355 84.2
Glyma.17G089600 Glycine max HOM05D003618 ORTHO05D004302 9.4e-168 593.6 328 88.1
HanXRQChr09g0272201 Helianthus annuus HOM05D003618 ORTHO05D004302 9.4e-168 593.6 324 89.2
Lalb_Chr13g0297811 Lupinus albus HOM05D003618 ORTHO05D004302 2.1e-167 592.4 324 88.3
Lsat_1_v5_gn_5_14440 Lactuca sativa HOM05D003618 ORTHO05D004302 3.6e-167 591.7 316 90.8
Psat4g058000 Pisum sativum HOM05D003618 ORTHO05D004302 3.6e-167 591.7 328 87.8
Atru.chr9.2476 Acer truncatum HOM05D003618 ORTHO05D004302 1.0e-166 590.1 324 88.6
Lsat_1_v5_gn_4_75261 Lactuca sativa HOM05D003618 ORTHO05D004302 1.0e-166 590.1 324 88.9
Lj9A449G48 Lonicera japonica HOM05D003618 ORTHO05D004302 1.0e-166 590.1 369 81.8
Ciclev10020004m.g Citrus clementina HOM05D003618 ORTHO05D004302 2.3e-166 589.0 324 88.0
Lalb_Chr07g0182731 Lupinus albus HOM05D003618 ORTHO05D004302 3.0e-166 588.6 324 87.7
Ah.11g051630 Amaranthus hybridus HOM05D003618 ORTHO05D004302 4.4e-165 584.7 328 87.8
CANSAT80G1130 Cannabis sativa HOM05D003618 ORTHO05D004302 4.4e-165 584.7 325 87.1
PGSC0003DMG400024503 Solanum tuberosum HOM05D003618 ORTHO05D004302 4.8e-164 581.3 345 87.8
Aa31LG11G890 Aethionema arabicum HOM05D003618 ORTHO05D004302 1.1e-163 580.1 329 86.6
Aa31sc1732G10 Aethionema arabicum HOM05D003618 ORTHO05D004302 1.1e-163 580.1 329 86.6
AUR62030965 Chenopodium quinoa HOM05D003618 ORTHO05D004302 1.4e-163 579.7 329 85.4
AUR62008212 Chenopodium quinoa HOM05D003618 ORTHO05D004302 3.1e-163 578.6 329 85.1
HanXRQChr05g0156211 Helianthus annuus HOM05D003618 ORTHO05D004302 7.0e-163 577.4 321 87.2
Lalb_Chr12g0201571 Lupinus albus HOM05D003618 ORTHO05D004302 3.5e-162 575.1 348 81.6
Migut.I00014 Erythranthe guttata HOM05D003618 ORTHO05D004302 5.0e-161 571.2 318 87.7
MBI16_g32207_MAGBIO Magnolia biondii HOM05D003618 ORTHO05D004302 3.2e-160 568.5 319 89.0
CANSAT80G1364 Cannabis sativa HOM05D003618 ORTHO05D004302 5.5e-160 567.8 326 83.7
MBI10_g14554_MAGBIO Magnolia biondii HOM05D003618 ORTHO05D004302 7.2e-160 567.4 321 88.2
Aa31LG11G900 Aethionema arabicum HOM05D003618 ORTHO05D004302 7.5e-157 557.4 324 84.3
Lalb_Chr12g0209981 Lupinus albus HOM05D003618 ORTHO05D004302 7.5e-157 557.4 316 84.5
Ciclev10019836m.g Citrus clementina HOM05D003618 ORTHO05D004302 8.2e-156 553.9 324 81.5
VMungo0331G0859 Vigna mungo HOM05D003618 ORTHO05D004302 1.6e-154 549.7 319 82.4
Glyma.16G089000 Glycine max HOM05D003618 ORTHO05D004302 5.9e-154 547.7 319 81.8
Pp3c24_8730 Physcomitrium patens HOM05D003618 ORTHO05D004302 1.3e-153 546.6 327 80.7
Phvul.010G023000 Phaseolus vulgaris HOM05D003618 ORTHO05D004302 3.8e-153 545.0 322 81.1
Ca_23215_v3 Cicer arietinum L. HOM05D003618 ORTHO05D004302 8.5e-153 543.9 317 82.6
Mapoly0034s0078 Marchantia polymorpha HOM05D003618 ORTHO05D004302 1.1e-152 543.5 322 81.1
TPR.G31563 Trifolium pratense HOM05D003618 ORTHO05D004302 1.9e-152 542.7 317 82.0
arahy.Tifrunner.gnm1.ann1.5ZTX8H Arachis hypogaea HOM05D003618 ORTHO05D004302 2.5e-152 542.3 319 80.6
Pp3c8_12290 Physcomitrium patens HOM05D003618 ORTHO05D004302 3.2e-152 542.0 323 81.4
arahy.Tifrunner.gnm1.ann1.NJJ8BU Arachis hypogaea HOM05D003618 ORTHO05D004302 4.2e-152 541.6 319 80.3
Medtr8g012565 Medicago truncatula HOM05D003618 ORTHO05D004302 2.1e-151 539.3 314 81.8
Hund09436 Selenicereus undatus HOM05D003618 ORTHO05D004302 1.0e-150 537.0 316 79.1
MBI10_g41914_MAGBIO Magnolia biondii HOM05D003618 ORTHO05D004302 1.8e-150 536.2 321 85.4
Lj3g0025861 Lotus japonicus HOM05D003618 ORTHO05D004302 6.8e-150 534.3 317 80.4
Mapoly0064s0074 Marchantia polymorpha HOM05D003618 ORTHO05D004302 6.8e-150 534.3 313 81.8
SGA_v2.0_scaffold25G10843 Striga asiatica HOM05D003618 ORTHO05D004302 1.2e-146 523.5 325 81.2
SMO348G0015 Selaginella moellendorffii HOM05D003618 ORTHO05D004302 1.3e-145 520.0 328 75.3
Cc00_g09910 Coffea canephora HOM05D003618 ORTHO05D004302 8.5e-145 517.3 306 83.3
CBR_g11924 Chara braunii HOM05D003618 ORTHO05D004302 1.7e-140 503.1 325 74.8
HanXRQChr16g0517311 Helianthus annuus HOM05D003618 ORTHO05D004302 1.4e-139 500.0 315 76.8
CDE06G1773 Ceratophyllum demersum HOM05D003618 ORTHO05D004302 2.5e-136 489.2 328 78.4
Cre12.g546050 Chlamydomonas reinhardtii HOM05D003618 ORTHO05D004302 4.0e-134 481.9 311 74.0
PRCOL_00002139 Prasinoderma coloniale HOM05D003618 ORTHO05D004302 7.3e-128 461.1 321 69.2
Aa31sc1732G20 Aethionema arabicum HOM05D003618 ORTHO05D004302 1.6e-127 459.9 256 88.3
MCO15G646 Micromonas commoda HOM05D003618 ORTHO05D004302 1.5e-125 453.4 331 66.2
Dinv02897 Davidia involucrata HOM05D003618 ORTHO05D004302 7.8e-122 441.0 223 96.4
Sabra12G0057700 Salix brachista HOM05D003618 ORTHO05D004302 4.3e-120 435.3 319 72.1
Zm00001eb334380 Zea mays HOM05D003618 ORTHO05D004302 4.6e-98 362.1 192 90.1
Gohir.D11G000766 Gossypium hirsutum HOM05D003618 ORTHO05D004302 2.1e-95 353.2 188 89.4
AagrBONN_evm.TU.Sc2ySwM_228.1199 Anthoceros agrestis HOM05D003618 ORTHO05D004302 2.5e-88 329.7 188 87.8
Sc12g0005330 Simmondsia chinensis HOM05D003618 ORTHO05D004302 5.6e-88 328.6 181 84.5
Sc12g0005340 Simmondsia chinensis HOM05D003618 ORTHO05D004302 5.7e-72 275.4 147 91.8
Cc04_g14070 Coffea canephora HOM05D003618 ORTHO05D004302 1.2e-69 267.7 223 65.0
Psat4g204400 Pisum sativum HOM05D003618 ORTHO05D004302 7.9e-66 255.0 147 83.7
VMungo0647G0692 Vigna mungo HOM05D003618 ORTHO05D004302 2.8e-63 246.5 158 80.4
FvH4_4g01210 Fragaria vesca HOM05D003618 ORTHO05D004302 1.2e-61 241.1 203 65.0
Lsat_1_v5_gn_0_46101 Lactuca sativa HOM05D003618 ORTHO05D004302 6.7e-57 225.3 333 39.9
Actinidia33067 Actinidia chinensis HOM05D003618 ORTHO05D004302 1.0e-52 211.5 110 97.3
Hund09437 Selenicereus undatus HOM05D003618 ORTHO05D004302 7.0e-46 188.7 316 40.2
FvH4_3g27741 Fragaria vesca HOM05D003618 ORTHO05D004302 3.1e-38 163.3 87 94.3
Zm00001eb334370 Zea mays HOM05D003618 ORTHO05D004302 2.0e-37 160.6 82 97.6
Gohir.D11G000832 Gossypium hirsutum HOM05D003618 ORTHO05D004302 4.4e-32 142.9 74 97.3
FvH4_1g09717 Fragaria vesca HOM05D003618 ORTHO05D004302 3.7e-31 139.8 71 93.0
FvH4_1g09716 Fragaria vesca HOM05D003618 ORTHO05D004302 1.4e-30 137.9 87 83.9
DCAR_016639 Daucus carota HOM05D003618 ORTHO05D003669 2.0e-29 134.0 75 88.0
Hma1.2p1_0549F.1_g176800 Hydrangea macrophylla HOM05D003618 ORTHO05D004302 5.4e-14 82.8 49 85.7
SGA_v2.0_scaffold45G17201 Striga asiatica HOM05D003618 ORTHO05D404764 1.7e-12 77.8 168 39.9
Cc00_g21160 Coffea canephora HOM05D003618 ORTHO05D153345 3.9e-12 76.6 47 76.6
Cc00_g09880 Coffea canephora HOM05D003618 ORTHO05D004302 9.5e-11 72.0 37 91.9


User provided reference genes

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