Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G78.73 Capsicum annuum HOM05D003492 ORTHO05D005115 5.8e-138 494.2 247 100.0
CAN.G78.68 Capsicum annuum HOM05D003492 ORTHO05D005115 8.5e-89 330.9 299 63.9
CAN.G1782.1 Capsicum annuum HOM05D003492 ORTHO05D005115 6.3e-84 314.7 299 61.5
Sopen06g014600 Solanum pennellii HOM05D003492 ORTHO05D005115 2.9e-76 289.3 299 55.9
Nitab4.5_0000797g0050 Nicotiana tabacum HOM05D003492 ORTHO05D005115 2.7e-74 282.7 299 55.2
Solyc06g048460.2 Solanum lycopersicum HOM05D003492 ORTHO05D005115 1.3e-73 280.4 299 54.5
Peaxi162Scf00284g00912 Petunia axillaris HOM05D003492 ORTHO05D005115 9.8e-69 264.2 299 52.8
CSS0013780 Camellia sinensis var. sinensis HOM05D003492 ORTHO05D005115 5.4e-43 178.7 297 39.7
Dinv10611 Davidia involucrata HOM05D003492 ORTHO05D005115 1.6e-42 177.2 300 41.0
TAR623G0495 Trochodendron aralioides HOM05D003492 ORTHO05D005115 6.6e-41 171.8 300 38.3
Migut.F01404 Erythranthe guttata HOM05D003492 ORTHO05D005115 2.5e-40 169.9 301 34.9
Oeu049666.1 Olea europaea HOM05D003492 ORTHO05D005115 2.5e-40 169.9 300 39.0
Cpa.g.sc19.161 Carica papaya HOM05D003492 ORTHO05D005115 1.3e-39 167.5 300 39.0
Thecc.10G014500 Theobroma cacao HOM05D003492 ORTHO05D005115 4.8e-39 165.6 296 37.2
Aqoxy4G02502 Aquilegia oxysepala HOM05D003492 ORTHO05D005115 1.8e-38 163.7 300 38.3
PSO384G0172 Papaver somniferum HOM05D003492 ORTHO05D005115 2.4e-38 163.3 300 37.3
TWI09G0940 Tripterygium wilfordii HOM05D003492 ORTHO05D005115 4.0e-38 162.5 303 36.6
PSO339G2087 Papaver somniferum HOM05D003492 ORTHO05D005115 5.3e-38 162.2 300 37.0
PGR142G1812 Punica granatum HOM05D003492 ORTHO05D005115 5.3e-38 162.2 300 37.3
Duzib106G0351 Durio zibethinus HOM05D003492 ORTHO05D005115 6.9e-38 161.8 296 36.1
DCAR_011823 Daucus carota HOM05D003492 ORTHO05D005115 1.2e-37 161.0 299 39.1
HanXRQChr14g0459601 Helianthus annuus HOM05D003492 ORTHO05D005115 4.4e-37 159.1 295 36.6
SGA_v2.0_scaffold365G49997 Striga asiatica HOM05D003492 ORTHO05D005115 4.4e-37 159.1 300 37.0
vmacro10035 Vaccinium macrocarpon HOM05D003492 ORTHO05D005115 4.4e-37 159.1 305 36.7
Gohir.A10G240100 Gossypium hirsutum HOM05D003492 ORTHO05D005115 7.6e-37 158.3 296 35.5
Lsat_1_v5_gn_2_124500 Lactuca sativa HOM05D003492 ORTHO05D005115 9.9e-37 157.9 295 37.3
Nn2g10890 Nelumbo nucifera HOM05D003492 ORTHO05D005115 1.3e-36 157.5 300 36.7
Potri.008G070300 Populus trichocarpa HOM05D003492 ORTHO05D005115 1.7e-36 157.1 304 37.5
MSTRG.8339 Avicennia marina HOM05D003492 ORTHO05D005115 3.8e-36 156.0 300 37.3
Rhsim09G0177900 Rhododendron simsii HOM05D003492 ORTHO05D005115 4.9e-36 155.6 299 36.1
Cc02_g06280 Coffea canephora HOM05D003492 ORTHO05D005115 6.4e-36 155.2 291 38.1
Gohir.D10G252000 Gossypium hirsutum HOM05D003492 ORTHO05D005115 3.2e-35 152.9 296 35.5
Atru.chr12.67 Acer truncatum HOM05D003492 ORTHO05D005115 5.4e-35 152.1 300 36.0
Gorai.011G292500 Gossypium raimondii HOM05D003492 ORTHO05D005115 5.4e-35 152.1 296 35.1
CANSAT56G1673 Cannabis sativa HOM05D003492 ORTHO05D005115 7.1e-35 151.8 298 35.6
Actinidia13945 Actinidia chinensis HOM05D003492 ORTHO05D005115 1.6e-34 150.6 299 36.8
ECA238G3428 Erigeron canadensis HOM05D003492 ORTHO05D005115 1.6e-34 150.6 295 35.9
GSVIVG01032797001 Vitis vinifera HOM05D003492 ORTHO05D005115 2.7e-34 149.8 300 37.0
Cfa001305 Carpinus fangiana HOM05D003492 ORTHO05D005115 3.5e-34 149.4 298 34.9
QL08p063313 Quercus lobata HOM05D003492 ORTHO05D005115 7.9e-34 148.3 298 34.9
Prupe.2G252000 Prunus persica HOM05D003492 ORTHO05D005115 3.9e-33 146.0 299 35.5
Glyma.02G258100 Glycine max HOM05D003492 ORTHO05D005115 1.1e-32 144.4 301 32.9
MBI15_g19421_MAGBIO Magnolia biondii HOM05D003492 ORTHO05D005115 1.5e-32 144.1 299 36.1
MD07G1223400 Malus domestica HOM05D003492 ORTHO05D005115 1.5e-32 144.1 300 35.7
FAN10G4174 Fragaria x ananassa HOM05D003492 ORTHO05D005115 2.5e-32 143.3 299 33.8
Lj8C65G6 Lonicera japonica HOM05D003492 ORTHO05D005115 4.3e-32 142.5 256 39.5
Haze_17240 Corylus avellana HOM05D003492 ORTHO05D005115 5.6e-32 142.1 299 35.1
LjContig00357g0011776 Lotus japonicus HOM05D003492 ORTHO05D005115 5.6e-32 142.1 300 33.3
FvH4_7g24630 Fragaria vesca HOM05D003492 ORTHO05D005115 9.6e-32 141.4 299 33.4
Ciclev10030498m.g Citrus clementina HOM05D003492 ORTHO05D005115 1.3e-31 141.0 302 35.4
FAN06G4945 Fragaria x ananassa HOM05D003492 ORTHO05D005115 1.3e-31 141.0 299 33.4
Manes.07G131200 Manihot esculenta HOM05D003492 ORTHO05D005115 1.6e-31 140.6 300 34.0
Glyma.14G058400 Glycine max HOM05D003492 ORTHO05D005115 3.6e-31 139.4 300 32.7
Eucgr.G03070 Eucalyptus grandis HOM05D003492 ORTHO05D005115 6.2e-31 138.7 300 33.7
arahy.Tifrunner.gnm1.ann1.V2YUX7 Arachis hypogaea HOM05D003492 ORTHO05D005115 8.1e-31 138.3 300 33.0
RcHm_v2.0_Chr1g0370461 Rosa chinensis HOM05D003492 ORTHO05D005115 1.1e-30 137.9 299 32.8
arahy.Tifrunner.gnm1.ann1.J7W2E5 Arachis hypogaea HOM05D003492 ORTHO05D005115 1.4e-30 137.5 304 32.9
FAN01G1605 Fragaria x ananassa HOM05D003492 ORTHO05D005115 1.4e-30 137.5 299 33.1
TPR.G38386 Trifolium pratense HOM05D003492 ORTHO05D005115 1.4e-30 137.5 300 33.3
VMungo0647G1152 Vigna mungo HOM05D003492 ORTHO05D005115 3.1e-30 136.3 269 34.2
ATR0681G383 Amborella trichopoda HOM05D003492 ORTHO05D005115 3.4e-29 132.9 300 32.7
ClCG07G004320 Citrullus lanatus HOM05D003492 ORTHO05D005115 3.4e-29 132.9 300 31.3
MELO3C026794.2 Cucumis melo HOM05D003492 ORTHO05D005115 9.9e-29 131.3 300 31.7
Medtr5g082890 Medicago truncatula HOM05D003492 ORTHO05D005115 2.9e-28 129.8 300 32.3
Sed0003450 Sechium edule HOM05D003492 ORTHO05D005115 2.9e-28 129.8 300 31.7
Sc11g0005130 Simmondsia chinensis HOM05D003492 ORTHO05D005115 2.9e-28 129.8 299 31.8
Ca_05974_v3 Cicer arietinum L. HOM05D003492 ORTHO05D005115 4.9e-28 129.0 300 32.3
Psat2g032000 Pisum sativum HOM05D003492 ORTHO05D005115 6.4e-28 128.6 314 31.2
Nitab4.5_0011089g0010 Nicotiana tabacum HOM05D003492 ORTHO05D005115 1.1e-27 127.9 76 81.6
Phvul.008G222900 Phaseolus vulgaris HOM05D003492 ORTHO05D005115 1.4e-27 127.5 300 31.0
Aa31LG11G6620 Aethionema arabicum HOM05D003492 ORTHO05D005115 3.2e-27 126.3 239 36.0
BcaB01g05759 Brassica carinata HOM05D003492 ORTHO05D005115 4.2e-27 125.9 298 32.9
C02p02390 Brassica napus HOM05D003492 ORTHO05D005115 4.2e-27 125.9 297 32.7
BolC2t06204H Brassica oleracea HOM05D003492 ORTHO05D005115 4.2e-27 125.9 297 33.3
CsaV3_5G010260 Cucumis sativus L. HOM05D003492 ORTHO05D005115 4.2e-27 125.9 300 31.3
BcaB05g21711 Brassica carinata HOM05D003492 ORTHO05D005115 1.2e-26 124.4 297 32.7
AL6G15450 Arabidopsis lyrata HOM05D003492 ORTHO05D005115 2.1e-26 123.6 296 33.1
THA.LOC104816541 Tarenaya hassleriana HOM05D003492 ORTHO05D005115 2.1e-26 123.6 299 31.8
BraA02t04853Z Brassica rapa HOM05D003492 ORTHO05D005115 2.7e-26 123.2 297 32.0
Sp6g37310 Schrenkiella parvula HOM05D003492 ORTHO05D005115 3.5e-26 122.9 299 32.1
Thhalv10012420m.g Eutrema salsugineum HOM05D003492 ORTHO05D005115 4.6e-26 122.5 297 32.7
unitig_60.g25675 Utricularia gibba HOM05D003492 ORTHO05D005115 6.0e-26 122.1 300 31.7
C03p02660 Brassica napus HOM05D003492 ORTHO05D005115 1.0e-25 121.3 297 32.0
EL10Ac2g04850 Beta vulgaris HOM05D003492 ORTHO05D005115 1.3e-25 120.9 299 31.8
AT5G05560 Arabidopsis thaliana HOM05D003492 ORTHO05D005115 2.3e-25 120.2 297 32.0
BcaB01g05953 Brassica carinata HOM05D003492 ORTHO05D005115 2.3e-25 120.2 297 31.6
BolC3t12820H Brassica oleracea HOM05D003492 ORTHO05D005115 2.3e-25 120.2 297 31.6
A03p02330 Brassica napus HOM05D003492 ORTHO05D005115 3.9e-25 119.4 298 32.2
BraA03t09597Z Brassica rapa HOM05D003492 ORTHO05D005115 3.9e-25 119.4 298 32.2
CARHR207700 Cardamine hirsuta HOM05D003492 ORTHO05D005115 3.9e-25 119.4 297 31.6
AUR62022903 Chenopodium quinoa HOM05D003492 ORTHO05D005115 5.1e-25 119.0 300 33.0
Carub.0006s0446 Capsella rubella HOM05D003492 ORTHO05D005115 3.3e-24 116.3 298 32.6
Sabra08G0051700 Salix brachista HOM05D003492 ORTHO05D005115 4.3e-24 115.9 96 62.5
Ah.16g103640 Amaranthus hybridus HOM05D003492 ORTHO05D005115 1.1e-22 111.3 296 31.8
AUR62012268 Chenopodium quinoa HOM05D003492 ORTHO05D005115 2.4e-22 110.2 300 33.0
Lalb_Chr04g0250511 Lupinus albus HOM05D003492 ORTHO05D005115 3.1e-22 109.8 95 58.9
FAN03G1412 Fragaria x ananassa HOM05D003492 ORTHO05D005115 4.5e-21 105.9 96 56.2
HPP92_012038 Vanilla planifolia HOM05D003492 ORTHO05D005115 1.0e-20 104.8 231 33.3
CDE12G0028 Ceratophyllum demersum HOM05D003492 ORTHO05D005115 1.3e-20 104.4 90 57.8
Psat3g009720 Pisum sativum HOM05D003492 ORTHO05D005540 1.3e-20 104.4 214 36.4
Hund15919 Selenicereus undatus HOM05D003492 ORTHO05D005115 1.1e-19 101.3 95 53.7
Rhsim10G0095400 Rhododendron simsii HOM05D003492 ORTHO05D005115 3.9e-17 92.8 84 58.3
Zm00001eb286110 Zea mays HOM05D003492 ORTHO05D005115 5.1e-17 92.4 96 51.0
Psat2g110320 Pisum sativum HOM05D003492 ORTHO05D005115 1.5e-16 90.9 195 34.4
SHI03332 Sapria himalayana HOM05D003492 ORTHO05D005115 3.3e-16 89.7 89 51.7
AagrBONN_evm.TU.Sc2ySwM_344.5492 Anthoceros agrestis HOM05D003492 ORTHO05D005115 9.6e-16 88.2 90 45.6
Pp3c11_19460 Physcomitrium patens HOM05D003492 ORTHO05D005115 2.4e-14 83.6 106 41.5
SEGI_00595 Sequoiadendron giganteum HOM05D003492 ORTHO05D005115 7.6e-13 78.6 231 30.7
Lsat_1_v5_gn_2_57160 Lactuca sativa HOM05D003492 ORTHO05D022499 1.9e-11 73.9 213 31.9
CiPaw.01G300100 Carya illinoinensis HOM05D003492 ORTHO05D005115 2.5e-11 73.6 171 31.6
SMO331G0080 Selaginella moellendorffii HOM05D003492 ORTHO05D005115 5.5e-11 72.4 103 38.8
Psat7g005400 Pisum sativum HOM05D003492 ORTHO05D024801 1.6e-10 70.9 109 39.4
Mapoly0044s0071 Marchantia polymorpha HOM05D003492 ORTHO05D005115 2.1e-10 70.5 91 42.9
FAN03G1608 Fragaria x ananassa HOM05D003492 ORTHO05D005115 7.9e-10 68.6 138 32.6
Rhsim05G0134800 Rhododendron simsii HOM05D003492 ORTHO05D005115 4.3e-08 62.8 51 68.6
Psat1g148680 Pisum sativum HOM05D003492 ORTHO05D024801 9.7e-08 61.6 58 51.7
MBI08_g18764_MAGBIO Magnolia biondii HOM05D003492 ORTHO05D005115 1.4e-06 57.8 140 32.1
SHI03333 Sapria himalayana HOM05D003492 ORTHO05D005115 4.1e-06 56.2 156 30.8


User provided reference genes

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