Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G78.72 Capsicum annuum HOM05D003492 ORTHO05D019467 6.0e-109 397.5 200 100.0
Sopen06g014600 Solanum pennellii HOM05D003492 ORTHO05D005115 3.6e-69 265.4 165 82.4
CAN.G1193.2 Capsicum annuum HOM05D003492 ORTHO05D019467 6.3e-66 254.6 131 94.7
Nitab4.5_0011089g0010 Nicotiana tabacum HOM05D003492 ORTHO05D005115 1.3e-47 193.7 128 78.9
Dinv10611 Davidia involucrata HOM05D003492 ORTHO05D005115 2.3e-39 166.4 164 54.9
Actinidia13944 Actinidia chinensis HOM05D003492 ORTHO05D005115 5.0e-39 165.2 163 54.6
TAR623G0495 Trochodendron aralioides HOM05D003492 ORTHO05D005115 2.1e-37 159.8 162 51.2
CSS0013780 Camellia sinensis var. sinensis HOM05D003492 ORTHO05D005115 4.7e-37 158.7 158 51.9
Cc02_g06300 Coffea canephora HOM05D003492 ORTHO05D005115 1.0e-36 157.5 163 53.4
Rhsim09G0177900 Rhododendron simsii HOM05D003492 ORTHO05D005115 2.3e-36 156.4 160 51.2
vmacro10035 Vaccinium macrocarpon HOM05D003492 ORTHO05D005115 7.5e-35 151.4 159 51.6
GSVIVG01032797001 Vitis vinifera HOM05D003492 ORTHO05D005115 1.3e-34 150.6 167 49.7
MSTRG.8339 Avicennia marina HOM05D003492 ORTHO05D005115 2.2e-34 149.8 164 45.7
MD07G1223400 Malus domestica HOM05D003492 ORTHO05D005115 4.9e-34 148.7 161 49.7
Cpa.g.sc19.161 Carica papaya HOM05D003492 ORTHO05D005115 6.4e-34 148.3 159 49.1
Manes.07G131200 Manihot esculenta HOM05D003492 ORTHO05D005115 6.4e-34 148.3 164 48.2
Prupe.2G252000 Prunus persica HOM05D003492 ORTHO05D005115 8.3e-34 147.9 160 49.4
PSO339G2087 Papaver somniferum HOM05D003492 ORTHO05D005115 3.2e-33 146.0 158 48.1
CiPaw.01G300000 Carya illinoinensis HOM05D003492 ORTHO05D005115 5.4e-33 145.2 159 49.1
FvH4_7g24630 Fragaria vesca HOM05D003492 ORTHO05D005115 7.0e-33 144.8 162 48.8
FAN06G4945 Fragaria x ananassa HOM05D003492 ORTHO05D005115 7.0e-33 144.8 162 48.8
CANSAT56G1673 Cannabis sativa HOM05D003492 ORTHO05D005115 2.0e-32 143.3 157 48.4
PSO384G0172 Papaver somniferum HOM05D003492 ORTHO05D005115 2.0e-32 143.3 158 45.6
AUR62012268 Chenopodium quinoa HOM05D003492 ORTHO05D005115 2.7e-32 142.9 160 45.6
DCAR_011823 Daucus carota HOM05D003492 ORTHO05D005115 2.7e-32 142.9 166 44.0
FAN01G1605 Fragaria x ananassa HOM05D003492 ORTHO05D005115 4.6e-32 142.1 162 47.5
Potri.008G070300 Populus trichocarpa HOM05D003492 ORTHO05D005115 4.6e-32 142.1 160 47.5
HanXRQChr14g0459601 Helianthus annuus HOM05D003492 ORTHO05D005115 6.0e-32 141.7 159 47.8
Medtr5g082890 Medicago truncatula HOM05D003492 ORTHO05D005115 6.0e-32 141.7 158 44.9
QL08p063313 Quercus lobata HOM05D003492 ORTHO05D005115 6.0e-32 141.7 163 46.0
arahy.Tifrunner.gnm1.ann1.J7W2E5 Arachis hypogaea HOM05D003492 ORTHO05D005115 7.8e-32 141.4 158 45.6
FAN10G4174 Fragaria x ananassa HOM05D003492 ORTHO05D005115 7.8e-32 141.4 162 48.8
SalBow5G5368 Salvia bowleyana HOM05D003492 ORTHO05D005115 7.8e-32 141.4 157 49.0
CsaV3_5G010260 Cucumis sativus L. HOM05D003492 ORTHO05D005115 1.0e-31 141.0 163 47.2
FAN03G1412 Fragaria x ananassa HOM05D003492 ORTHO05D005115 1.0e-31 141.0 162 48.8
RcHm_v2.0_Chr1g0370461 Rosa chinensis HOM05D003492 ORTHO05D005115 1.0e-31 141.0 168 46.4
Sed0003450 Sechium edule HOM05D003492 ORTHO05D005115 1.0e-31 141.0 165 47.3
TPR.G38386 Trifolium pratense HOM05D003492 ORTHO05D005115 1.0e-31 141.0 158 44.9
AUR62022903 Chenopodium quinoa HOM05D003492 ORTHO05D005115 1.3e-31 140.6 160 45.6
MELO3C026794.2 Cucumis melo HOM05D003492 ORTHO05D005115 3.9e-31 139.0 162 46.3
Ah.16g103640 Amaranthus hybridus HOM05D003492 ORTHO05D005115 5.0e-31 138.7 160 44.4
ClCG07G004320 Citrullus lanatus HOM05D003492 ORTHO05D005115 5.0e-31 138.7 162 45.7
Nn2g10890 Nelumbo nucifera HOM05D003492 ORTHO05D005115 6.6e-31 138.3 158 45.6
Gohir.A10G240100 Gossypium hirsutum HOM05D003492 ORTHO05D005115 8.6e-31 137.9 159 45.9
Aqoxy4G02502 Aquilegia oxysepala HOM05D003492 ORTHO05D005115 1.1e-30 137.5 158 45.6
EL10Ac2g04850 Beta vulgaris HOM05D003492 ORTHO05D005115 1.1e-30 137.5 158 44.9
Glyma.02G258100 Glycine max HOM05D003492 ORTHO05D005115 1.1e-30 137.5 158 44.3
Phvul.008G222900 Phaseolus vulgaris HOM05D003492 ORTHO05D005115 1.9e-30 136.7 158 43.7
Hund15919 Selenicereus undatus HOM05D003492 ORTHO05D005115 2.5e-30 136.3 157 46.5
LjContig00357g0011776 Lotus japonicus HOM05D003492 ORTHO05D005115 4.3e-30 135.6 158 44.3
Ciclev10030498m.g Citrus clementina HOM05D003492 ORTHO05D005115 5.6e-30 135.2 159 47.8
Migut.F01404 Erythranthe guttata HOM05D003492 ORTHO05D005115 5.6e-30 135.2 160 45.6
Eucgr.G03070 Eucalyptus grandis HOM05D003492 ORTHO05D005115 5.6e-30 135.2 165 44.2
VMungo0647G1152 Vigna mungo HOM05D003492 ORTHO05D005115 5.6e-30 135.2 158 42.4
Ca_05974_v3 Cicer arietinum L. HOM05D003492 ORTHO05D005115 7.3e-30 134.8 158 41.8
Glyma.14G058400 Glycine max HOM05D003492 ORTHO05D005115 7.3e-30 134.8 158 43.0
Psat2g032000 Pisum sativum HOM05D003492 ORTHO05D005115 7.3e-30 134.8 158 44.3
BcaB01g05759 Brassica carinata HOM05D003492 ORTHO05D005115 9.5e-30 134.4 167 48.5
Gohir.D10G252000 Gossypium hirsutum HOM05D003492 ORTHO05D005115 1.2e-29 134.0 159 44.7
Gorai.011G292500 Gossypium raimondii HOM05D003492 ORTHO05D005115 1.2e-29 134.0 159 44.7
AT5G05560 Arabidopsis thaliana HOM05D003492 ORTHO05D005115 1.6e-29 133.7 166 45.8
C02p02390 Brassica napus HOM05D003492 ORTHO05D005115 2.1e-29 133.3 162 47.5
BolC2t06204H Brassica oleracea HOM05D003492 ORTHO05D005115 2.1e-29 133.3 162 47.5
Atru.chr12.67 Acer truncatum HOM05D003492 ORTHO05D005115 4.7e-29 132.1 162 42.6
TWI09G0940 Tripterygium wilfordii HOM05D003492 ORTHO05D005115 4.7e-29 132.1 161 42.9
BraA02t04853Z Brassica rapa HOM05D003492 ORTHO05D005115 6.2e-29 131.7 162 47.5
AL6G15450 Arabidopsis lyrata HOM05D003492 ORTHO05D005115 1.4e-28 130.6 166 45.2
arahy.Tifrunner.gnm1.ann1.V2YUX7 Arachis hypogaea HOM05D003492 ORTHO05D005115 2.3e-28 129.8 175 40.6
ECA238G3428 Erigeron canadensis HOM05D003492 ORTHO05D005115 2.3e-28 129.8 166 43.4
Carub.0006s0446 Capsella rubella HOM05D003492 ORTHO05D005115 3.1e-28 129.4 167 44.3
Lsat_1_v5_gn_2_124500 Lactuca sativa HOM05D003492 ORTHO05D005115 3.1e-28 129.4 168 42.3
Sc11g0005130 Simmondsia chinensis HOM05D003492 ORTHO05D005115 4.0e-28 129.0 159 44.7
BcaB01g05953 Brassica carinata HOM05D003492 ORTHO05D005115 6.8e-28 128.3 167 45.5
BolC3t12820H Brassica oleracea HOM05D003492 ORTHO05D005115 6.8e-28 128.3 167 45.5
CDE12G0911 Ceratophyllum demersum HOM05D003492 ORTHO05D005115 6.8e-28 128.3 177 41.2
CARHR207700 Cardamine hirsuta HOM05D003492 ORTHO05D005115 1.2e-27 127.5 164 47.0
Duzib106G0351 Durio zibethinus HOM05D003492 ORTHO05D005115 1.2e-27 127.5 158 43.0
SGA_v2.0_scaffold365G49997 Striga asiatica HOM05D003492 ORTHO05D005115 1.2e-27 127.5 166 41.6
THA.LOC104816541 Tarenaya hassleriana HOM05D003492 ORTHO05D005115 1.5e-27 127.1 168 44.6
Lalb_Chr04g0250511 Lupinus albus HOM05D003492 ORTHO05D005115 2.0e-27 126.7 158 40.5
C03p02660 Brassica napus HOM05D003492 ORTHO05D005115 4.4e-27 125.6 163 45.4
Cfa001305 Carpinus fangiana HOM05D003492 ORTHO05D005115 4.4e-27 125.6 125 53.6
A03p02330 Brassica napus HOM05D003492 ORTHO05D005115 9.8e-27 124.4 167 44.9
BraA03t09597Z Brassica rapa HOM05D003492 ORTHO05D005115 1.7e-26 123.6 167 44.9
Sp6g37310 Schrenkiella parvula HOM05D003492 ORTHO05D005115 8.3e-26 121.3 167 44.3
Sabra08G0051700 Salix brachista HOM05D003492 ORTHO05D005115 1.4e-25 120.6 200 37.0
unitig_60.g25675 Utricularia gibba HOM05D003492 ORTHO05D005115 2.4e-25 119.8 158 43.0
Lj8C65T9 Lonicera japonica HOM05D003492 ORTHO05D019467 2.7e-24 116.3 128 48.4
HPP92_012039 Vanilla planifolia HOM05D003492 ORTHO05D005115 3.5e-24 115.9 179 39.7
PGR142G1812 Punica granatum HOM05D003492 ORTHO05D005115 3.0e-23 112.8 164 39.6
Haze_17240 Corylus avellana HOM05D003492 ORTHO05D005115 8.6e-23 111.3 133 45.9
Nitab4.5_0000797g0050 Nicotiana tabacum HOM05D003492 ORTHO05D005115 3.3e-22 109.4 68 85.3
Os05g0354300 Oryza sativa ssp. japonica HOM05D003492 ORTHO05D005115 2.8e-21 106.3 160 37.5
Actinidia00955 Actinidia chinensis HOM05D003492 ORTHO05D019467 1.1e-20 104.4 107 52.3
Aa31LG11G6620 Aethionema arabicum HOM05D003492 ORTHO05D005115 4.0e-20 102.4 141 44.0
SHI03327 Sapria himalayana HOM05D003492 ORTHO05D000001 2.6e-19 99.8 126 43.7
ATR0681G383 Amborella trichopoda HOM05D003492 ORTHO05D005115 1.7e-18 97.1 171 36.8
Thhalv10012420m.g Eutrema salsugineum HOM05D003492 ORTHO05D005115 4.9e-18 95.5 130 41.5
Thhalv10015394m.g Eutrema salsugineum HOM05D003492 ORTHO05D035223 6.8e-12 75.1 96 49.0
SEGI_23081 Sequoiadendron giganteum HOM05D003492 ORTHO05D019467 1.5e-11 73.9 175 26.3
Pp3c11_19460 Physcomitrium patens HOM05D003492 ORTHO05D005115 9.2e-09 64.7 223 26.5
Solyc06g048460.2 Solanum lycopersicum HOM05D003492 ORTHO05D005115 1.7e-07 60.5 36 86.1
Peaxi162Scf00284g00913 Petunia axillaris HOM05D003492 ORTHO05D005115 9.6e-06 54.7 33 87.9


User provided reference genes

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