Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G78.70 Capsicum annuum HOM05D003492 ORTHO05D005115 1.3e-151 539.7 268 100.0
Nitab4.5_0000797g0050 Nicotiana tabacum HOM05D003492 ORTHO05D005115 9.9e-99 364.0 188 96.3
Nitab4.5_0011089g0010 Nicotiana tabacum HOM05D003492 ORTHO05D005115 3.8e-98 362.1 199 92.0
Solyc06g048460.2 Solanum lycopersicum HOM05D003492 ORTHO05D005115 6.4e-98 361.3 186 96.8
Sopen06g014600 Solanum pennellii HOM05D003492 ORTHO05D005115 6.4e-98 361.3 186 96.8
Nn2g10890 Nelumbo nucifera HOM05D003492 ORTHO05D005115 1.1e-92 344.0 186 90.9
Cc02_g06280 Coffea canephora HOM05D003492 ORTHO05D005115 1.8e-92 343.2 186 90.9
Dinv10611 Davidia involucrata HOM05D003492 ORTHO05D005115 2.4e-92 342.8 186 90.9
vmacro10035 Vaccinium macrocarpon HOM05D003492 ORTHO05D005115 1.5e-91 340.1 194 87.1
Lsat_1_v5_gn_2_124500 Lactuca sativa HOM05D003492 ORTHO05D005115 5.8e-91 338.2 186 89.2
DCAR_011823 Daucus carota HOM05D003492 ORTHO05D005115 7.6e-91 337.8 186 90.3
CSS0013780 Camellia sinensis var. sinensis HOM05D003492 ORTHO05D005115 9.9e-91 337.4 185 90.3
GSVIVG01032797001 Vitis vinifera HOM05D003492 ORTHO05D005115 1.3e-90 337.0 186 89.8
SGA_v2.0_scaffold365G49997 Striga asiatica HOM05D003492 ORTHO05D005115 3.8e-90 335.5 186 87.1
Duzib106G0351 Durio zibethinus HOM05D003492 ORTHO05D005115 1.1e-89 334.0 186 89.2
HanXRQChr14g0459601 Helianthus annuus HOM05D003492 ORTHO05D005115 3.2e-89 332.4 186 87.6
Migut.F01404 Erythranthe guttata HOM05D003492 ORTHO05D005115 1.2e-88 330.5 186 86.6
Sc11g0005130 Simmondsia chinensis HOM05D003492 ORTHO05D005115 2.7e-88 329.3 186 86.6
TWI09G0940 Tripterygium wilfordii HOM05D003492 ORTHO05D005115 3.5e-88 328.9 186 87.1
QL08p063313 Quercus lobata HOM05D003492 ORTHO05D005115 1.0e-87 327.4 186 86.0
MSTRG.8339 Avicennia marina HOM05D003492 ORTHO05D005115 1.3e-87 327.0 186 86.0
Lj8C65G6 Lonicera japonica HOM05D003492 ORTHO05D005115 1.7e-87 326.6 189 87.3
Manes.07G131200 Manihot esculenta HOM05D003492 ORTHO05D005115 1.7e-87 326.6 186 86.0
PSO339G2087 Papaver somniferum HOM05D003492 ORTHO05D005115 1.7e-87 326.6 186 84.4
Thecc.10G014500 Theobroma cacao HOM05D003492 ORTHO05D005115 2.3e-87 326.2 186 87.6
Gohir.A10G240100 Gossypium hirsutum HOM05D003492 ORTHO05D005115 3.9e-87 325.5 186 86.0
Gohir.D10G252000 Gossypium hirsutum HOM05D003492 ORTHO05D005115 3.9e-87 325.5 186 86.0
Gorai.011G292500 Gossypium raimondii HOM05D003492 ORTHO05D005115 3.9e-87 325.5 186 86.0
Oeu049666.1 Olea europaea HOM05D003492 ORTHO05D005115 6.6e-87 324.7 191 85.3
ECA238G3428 Erigeron canadensis HOM05D003492 ORTHO05D005115 1.5e-86 323.6 186 86.0
Hund15919 Selenicereus undatus HOM05D003492 ORTHO05D005115 1.9e-86 323.2 186 83.9
arahy.Tifrunner.gnm1.ann1.J7W2E5 Arachis hypogaea HOM05D003492 ORTHO05D005115 2.5e-86 322.8 186 85.5
arahy.Tifrunner.gnm1.ann1.V2YUX7 Arachis hypogaea HOM05D003492 ORTHO05D005115 2.5e-86 322.8 186 85.5
ClCG07G004320 Citrullus lanatus HOM05D003492 ORTHO05D005115 5.6e-86 321.6 186 84.9
MELO3C026794.2 Cucumis melo HOM05D003492 ORTHO05D005115 5.6e-86 321.6 186 84.9
Eucgr.G03070 Eucalyptus grandis HOM05D003492 ORTHO05D005115 5.6e-86 321.6 186 85.5
MD07G1223400 Malus domestica HOM05D003492 ORTHO05D005115 5.6e-86 321.6 186 84.9
Prupe.2G252000 Prunus persica HOM05D003492 ORTHO05D005115 5.6e-86 321.6 186 85.5
CsaV3_5G010260 Cucumis sativus L. HOM05D003492 ORTHO05D005115 9.6e-86 320.9 186 84.9
CiPaw.01G300000 Carya illinoinensis HOM05D003492 ORTHO05D005115 1.6e-85 320.1 186 85.5
PSO384G0172 Papaver somniferum HOM05D003492 ORTHO05D005115 3.6e-85 318.9 186 83.3
Ciclev10030498m.g Citrus clementina HOM05D003492 ORTHO05D005115 4.8e-85 318.5 186 83.3
Haze_17240 Corylus avellana HOM05D003492 ORTHO05D005115 4.8e-85 318.5 186 83.9
Sed0003450 Sechium edule HOM05D003492 ORTHO05D005115 6.2e-85 318.2 186 83.9
Cfa001305 Carpinus fangiana HOM05D003492 ORTHO05D005115 8.1e-85 317.8 186 82.8
AUR62012268 Chenopodium quinoa HOM05D003492 ORTHO05D005115 8.1e-85 317.8 186 81.2
AUR62022903 Chenopodium quinoa HOM05D003492 ORTHO05D005115 8.1e-85 317.8 186 81.2
VMungo0647G1152 Vigna mungo HOM05D003492 ORTHO05D005115 1.4e-84 317.0 186 83.3
CANSAT56G1673 Cannabis sativa HOM05D003492 ORTHO05D005115 2.4e-84 316.2 186 82.8
LjContig00357g0011776 Lotus japonicus HOM05D003492 ORTHO05D005115 2.4e-84 316.2 186 84.4
Glyma.02G258100 Glycine max HOM05D003492 ORTHO05D005115 3.1e-84 315.8 186 83.9
Potri.008G070300 Populus trichocarpa HOM05D003492 ORTHO05D005115 3.1e-84 315.8 186 83.3
Ca_05974_v3 Cicer arietinum L. HOM05D003492 ORTHO05D005115 5.3e-84 315.1 186 83.3
Medtr5g082890 Medicago truncatula HOM05D003492 ORTHO05D005115 5.3e-84 315.1 186 83.3
TPR.G38386 Trifolium pratense HOM05D003492 ORTHO05D005115 6.9e-84 314.7 186 83.3
Phvul.008G222900 Phaseolus vulgaris HOM05D003492 ORTHO05D005115 9.0e-84 314.3 186 82.8
RcHm_v2.0_Chr1g0370461 Rosa chinensis HOM05D003492 ORTHO05D005115 1.5e-83 313.5 186 82.8
Aqoxy4G02502 Aquilegia oxysepala HOM05D003492 ORTHO05D005115 2.0e-83 313.2 186 82.3
EL10Ac2g04850 Beta vulgaris HOM05D003492 ORTHO05D005115 2.0e-83 313.2 186 80.6
Psat2g032000 Pisum sativum HOM05D003492 ORTHO05D005115 2.0e-83 313.2 186 82.8
Lalb_Chr04g0250511 Lupinus albus HOM05D003492 ORTHO05D005115 9.9e-83 310.8 186 83.3
FvH4_7g24630 Fragaria vesca HOM05D003492 ORTHO05D005115 1.3e-82 310.5 186 81.2
FAN01G1605 Fragaria x ananassa HOM05D003492 ORTHO05D005115 1.3e-82 310.5 186 81.2
FAN03G1412 Fragaria x ananassa HOM05D003492 ORTHO05D005115 1.3e-82 310.5 186 81.2
FAN10G4174 Fragaria x ananassa HOM05D003492 ORTHO05D005115 1.1e-81 307.4 186 80.6
FAN06G4945 Fragaria x ananassa HOM05D003492 ORTHO05D005115 1.4e-81 307.0 186 80.6
Sabra08G0051700 Salix brachista HOM05D003492 ORTHO05D005115 2.4e-81 306.2 208 75.0
ATR0681G383 Amborella trichopoda HOM05D003492 ORTHO05D005115 3.2e-81 305.8 186 80.6
Atru.chr12.67 Acer truncatum HOM05D003492 ORTHO05D005115 2.1e-80 303.1 188 79.8
Rhsim09G0177900 Rhododendron simsii HOM05D003492 ORTHO05D005115 3.9e-79 298.9 187 81.8
Peaxi162Scf00284g00913 Petunia axillaris HOM05D003492 ORTHO05D005115 5.1e-79 298.5 158 92.4
AT5G05560 Arabidopsis thaliana HOM05D003492 ORTHO05D005115 4.3e-78 295.4 186 77.4
Actinidia13945 Actinidia chinensis HOM05D003492 ORTHO05D005115 5.6e-78 295.0 167 86.8
C02p02390 Brassica napus HOM05D003492 ORTHO05D005115 1.3e-77 293.9 186 77.4
BcaB01g05953 Brassica carinata HOM05D003492 ORTHO05D005115 1.6e-77 293.5 186 78.0
Sp6g37310 Schrenkiella parvula HOM05D003492 ORTHO05D005115 2.1e-77 293.1 186 76.9
THA.LOC104816541 Tarenaya hassleriana HOM05D003492 ORTHO05D005115 2.8e-77 292.7 186 76.3
Aa31LG11G6620 Aethionema arabicum HOM05D003492 ORTHO05D005115 4.8e-77 292.0 186 76.9
CARHR207700 Cardamine hirsuta HOM05D003492 ORTHO05D005115 4.8e-77 292.0 189 76.2
BcaB01g05759 Brassica carinata HOM05D003492 ORTHO05D005115 8.1e-77 291.2 186 77.4
Carub.0006s0446 Capsella rubella HOM05D003492 ORTHO05D005115 1.4e-76 290.4 186 75.8
AL6G15450 Arabidopsis lyrata HOM05D003492 ORTHO05D005115 2.4e-76 289.7 186 75.8
MBI15_g19421_MAGBIO Magnolia biondii HOM05D003492 ORTHO05D005115 4.0e-76 288.9 186 77.4
C03p02660 Brassica napus HOM05D003492 ORTHO05D005115 5.3e-76 288.5 196 74.5
BolC3t12820H Brassica oleracea HOM05D003492 ORTHO05D005115 2.6e-75 286.2 196 74.0
BraA02t04853Z Brassica rapa HOM05D003492 ORTHO05D005115 2.6e-75 286.2 196 73.5
CDE12G0028 Ceratophyllum demersum HOM05D003492 ORTHO05D005115 9.9e-75 284.3 186 73.7
Zm00001eb286110 Zea mays HOM05D003492 ORTHO05D005115 3.2e-73 279.3 186 75.3
unitig_60.g25675 Utricularia gibba HOM05D003492 ORTHO05D005115 3.5e-72 275.8 186 73.1
Ah.16g103640 Amaranthus hybridus HOM05D003492 ORTHO05D005115 2.3e-71 273.1 164 79.9
Os05g0354300 Oryza sativa ssp. japonica HOM05D003492 ORTHO05D005115 6.7e-71 271.6 181 75.1
Glyma.14G058400 Glycine max HOM05D003492 ORTHO05D005115 1.5e-70 270.4 159 82.4
Gorai.011G292700 Gossypium raimondii HOM05D003492 ORTHO05D005115 7.4e-70 268.1 194 71.1
BraA03t09597Z Brassica rapa HOM05D003492 ORTHO05D005115 2.8e-69 266.2 186 71.0
BolC2t06204H Brassica oleracea HOM05D003492 ORTHO05D005115 1.0e-66 257.7 186 69.9
Mapoly0044s0071 Marchantia polymorpha HOM05D003492 ORTHO05D005115 2.2e-66 256.5 189 67.2
SHI03332 Sapria himalayana HOM05D003492 ORTHO05D005115 1.4e-65 253.8 176 71.0
AagrBONN_evm.TU.Sc2ySwM_344.5492 Anthoceros agrestis HOM05D003492 ORTHO05D005115 1.9e-65 253.4 189 67.2
Pp3c11_19460 Physcomitrium patens HOM05D003492 ORTHO05D005115 5.5e-65 251.9 189 66.7
PGR142G1812 Punica granatum HOM05D003492 ORTHO05D005115 2.5e-62 243.0 186 69.4
A03p02330 Brassica napus HOM05D003492 ORTHO05D005115 8.2e-61 238.0 186 65.6
Thhalv10012420m.g Eutrema salsugineum HOM05D003492 ORTHO05D005115 8.2e-61 238.0 186 66.1
HPP92_012039 Vanilla planifolia HOM05D003492 ORTHO05D005115 1.4e-60 237.3 144 81.2
Rhsim10G0095300 Rhododendron simsii HOM05D003492 ORTHO05D005115 2.4e-60 236.5 199 67.3
BcaB05g21711 Brassica carinata HOM05D003492 ORTHO05D005115 2.2e-58 229.9 186 65.1
Cpa.g.sc19.161 Carica papaya HOM05D003492 ORTHO05D005115 2.2e-58 229.9 131 84.0
CBR_g22845 Chara braunii HOM05D003492 ORTHO05D005115 8.8e-55 218.0 190 57.9
TAR623G0495 Trochodendron aralioides HOM05D003492 ORTHO05D005115 4.1e-52 209.1 194 60.8
SMO331G0080 Selaginella moellendorffii HOM05D003492 ORTHO05D005115 2.5e-49 199.9 186 53.8
SEGI_00595 Sequoiadendron giganteum HOM05D003492 ORTHO05D005115 1.7e-45 187.2 159 61.6
Rhsim05G0134800 Rhododendron simsii HOM05D003492 ORTHO05D005115 2.5e-41 173.3 173 58.4
MCO04G065 Micromonas commoda HOM05D003492 ORTHO05D005115 1.0e-39 167.9 202 48.0
Actinidia35642 Actinidia chinensis HOM05D003492 ORTHO05D005115 5.2e-31 139.0 201 43.8
Cre13.g579100 Chlamydomonas reinhardtii HOM05D003492 ORTHO05D005115 2.4e-28 130.2 172 44.2
SMO105G0008 Selaginella moellendorffii HOM05D003492 ORTHO05D005115 2.4e-20 103.6 72 61.1
Actinidia03517 Actinidia chinensis HOM05D003492 ORTHO05D005115 4.1e-20 102.8 54 83.3
Cfa022850 Carpinus fangiana HOM05D003492 ORTHO05D005115 7.2e-17 92.0 197 33.5


User provided reference genes

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