Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G78.6 Capsicum annuum HOM05D000435 ORTHO05D013824 3.3e-50 201.4 103 100.0
CAN.G72.11 Capsicum annuum HOM05D000435 ORTHO05D013824 6.4e-46 187.2 103 94.2
CAN.G1485.3 Capsicum annuum HOM05D000435 ORTHO05D013824 7.0e-45 183.7 103 91.3
CAN.G85.21 Capsicum annuum HOM05D000435 ORTHO05D016180 5.2e-32 141.0 71 98.6
Nitab4.5_0000085g0100 Nicotiana tabacum HOM05D000435 ORTHO05D013824 3.4e-31 138.3 71 94.4
CAN.G1.3 Capsicum annuum HOM05D000435 ORTHO05D016180 3.7e-30 134.8 75 90.7
CAN.G1109.6 Capsicum annuum HOM05D000435 ORTHO05D016180 4.9e-30 134.4 71 93.0
Nitab4.5_0001152g0690 Nicotiana tabacum HOM05D000435 ORTHO05D013824 2.4e-29 132.1 71 91.5
Nitab4.5_0008535g0030 Nicotiana tabacum HOM05D000435 ORTHO05D013824 7.1e-29 130.6 67 97.0
CAN.G623.32 Capsicum annuum HOM05D000435 ORTHO05D000430 6.0e-28 127.5 71 90.1
Peaxi162Scf00139g01031 Petunia axillaris HOM05D000435 ORTHO05D000430 7.8e-28 127.1 71 87.3
Solyc07g065770.3 Solanum lycopersicum HOM05D000435 ORTHO05D013824 6.6e-27 124.0 71 88.7
Nitab4.5_0005853g0060 Nicotiana tabacum HOM05D068302 ORTHO05D013824 2.5e-26 122.1 68 91.2
Nitab4.5_0000172g2200 Nicotiana tabacum HOM05D000435 ORTHO05D013824 1.6e-25 119.4 69 85.5
Nitab4.5_0000152g0410 Nicotiana tabacum HOM05D000435 ORTHO05D000430 8.1e-25 117.1 72 83.3
Sopen07g033980 Solanum pennellii HOM05D003572 ORTHO05D004118 8.1e-25 117.1 68 88.2
Nitab4.5_0010643g0020 Nicotiana tabacum HOM05D000435 ORTHO05D000430 1.8e-24 115.9 73 82.2
CAN.G131.13 Capsicum annuum HOM05D044362 ORTHO05D016180 4.0e-24 114.8 72 81.9
Dinv10357 Davidia involucrata HOM05D000435 ORTHO05D000430 3.8e-22 108.2 71 77.5
Prupe.6G027000 Prunus persica HOM05D000435 ORTHO05D000430 4.6e-20 101.3 71 71.8
Gohir.A08G025300 Gossypium hirsutum HOM05D000435 ORTHO05D000430 7.8e-20 100.5 73 74.0
Gohir.D08G035800 Gossypium hirsutum HOM05D000435 ORTHO05D000430 7.8e-20 100.5 73 74.0
Gorai.004G033800 Gossypium raimondii HOM05D000435 ORTHO05D000430 7.8e-20 100.5 73 74.0
MD11G1036200 Malus domestica HOM05D000435 ORTHO05D000430 7.8e-20 100.5 93 59.1
RcHm_v2.0_Chr5g0075901 Rosa chinensis HOM05D000435 ORTHO05D000430 7.8e-20 100.5 94 59.6
CSS0004404 Camellia sinensis var. sinensis HOM05D000435 ORTHO05D000430 1.0e-19 100.1 74 74.3
CSS0032781 Camellia sinensis var. sinensis HOM05D000435 ORTHO05D000430 1.0e-19 100.1 74 74.3
DCAR_017069 Daucus carota HOM05D000435 ORTHO05D000430 1.3e-19 99.8 72 73.6
Duzib170G0379 Durio zibethinus HOM05D000435 ORTHO05D000430 1.7e-19 99.4 71 71.8
Glyma.14G012000 Glycine max HOM05D000435 ORTHO05D000430 1.7e-19 99.4 71 69.0
Psat0s4150g0240 Pisum sativum HOM05D000435 ORTHO05D000430 1.7e-19 99.4 72 69.4
QL08p003237 Quercus lobata HOM05D000435 ORTHO05D000430 1.7e-19 99.4 71 70.4
Thecc.07G008500 Theobroma cacao HOM05D000435 ORTHO05D000430 3.0e-19 98.6 81 66.7
Ca_06413_v3 Cicer arietinum L. HOM05D000435 ORTHO05D000430 3.9e-19 98.2 101 55.4
Manes.03G143200 Manihot esculenta HOM05D000435 ORTHO05D000430 3.9e-19 98.2 81 66.7
Atru.chr2.3749 Acer truncatum HOM05D000435 ORTHO05D000430 6.6e-19 97.4 71 70.4
Atru.chr2.3763 Acer truncatum HOM05D000435 ORTHO05D000430 6.6e-19 97.4 71 70.4
Sabra16G0243600 Salix brachista HOM05D000435 ORTHO05D000430 1.1e-18 96.7 71 67.6
Cpa.g.sc12.135 Carica papaya HOM05D000435 ORTHO05D000430 1.9e-18 95.9 68 75.0
Glyma.02G302200 Glycine max HOM05D000435 ORTHO05D000430 1.9e-18 95.9 71 66.2
Lalb_Chr10g0107501 Lupinus albus HOM05D000435 ORTHO05D000430 1.9e-18 95.9 71 69.0
LjContig00081g0009877 Lotus japonicus HOM05D000435 ORTHO05D000430 2.5e-18 95.5 71 66.2
Nitab4.5_0001152g0130 Nicotiana tabacum HOM05D000435 ORTHO05D013824 2.5e-18 95.5 55 85.5
GSVIVG01014733001 Vitis vinifera HOM05D000435 ORTHO05D000430 2.5e-18 95.5 90 57.8
Potri.011G094650 Populus trichocarpa HOM05D000435 ORTHO05D000430 7.3e-18 94.0 72 68.1
CAN.G1.23 Capsicum annuum HOM05D000435 ORTHO05D016180 9.6e-18 93.6 53 84.9
Cfa016927 Carpinus fangiana HOM05D000435 ORTHO05D000430 9.6e-18 93.6 71 71.8
Nitab4.5_0000172g0070 Nicotiana tabacum HOM05D000435 ORTHO05D016180 9.6e-18 93.6 53 86.8
Potri.001G370600 Populus trichocarpa HOM05D000435 ORTHO05D000430 1.3e-17 93.2 72 68.1
TAR627G0575 Trochodendron aralioides HOM05D003572 ORTHO05D004118 1.3e-17 93.2 71 69.0
TPR.G1291 Trifolium pratense HOM05D000435 ORTHO05D000430 1.6e-17 92.8 101 52.5
DCAR_013252 Daucus carota HOM05D000435 ORTHO05D000430 2.1e-17 92.4 73 69.9
Nitab4.5_0001152g0100 Nicotiana tabacum HOM05D000435 ORTHO05D016180 2.1e-17 92.4 52 86.5
CiPaw.11G206300 Carya illinoinensis HOM05D000435 ORTHO05D000430 2.8e-17 92.0 71 69.0
Lj1A893T55 Lonicera japonica HOM05D000435 ORTHO05D000430 2.8e-17 92.0 71 69.0
Phvul.008G280800 Phaseolus vulgaris HOM05D000435 ORTHO05D000430 3.6e-17 91.7 71 62.0
PGSC0003DMG400022268 Solanum tuberosum HOM05D003572 ORTHO05D004118 4.8e-17 91.3 50 92.0
VMungo0647G0856 Vigna mungo HOM05D000435 ORTHO05D000430 8.1e-17 90.5 71 62.0
Haze_09858 Corylus avellana HOM05D000435 ORTHO05D000430 1.1e-16 90.1 72 70.8
Sc03g0011590 Simmondsia chinensis HOM05D000435 ORTHO05D000430 1.1e-16 90.1 71 67.6
TWI39G0143 Tripterygium wilfordii HOM05D000435 ORTHO05D000430 1.4e-16 89.7 71 69.0
Nitab4.5_0002312g0050 Nicotiana tabacum HOM05D000435 ORTHO05D013824 1.8e-16 89.4 51 82.4
Nitab4.5_0008300g0010 Nicotiana tabacum HOM05D000435 ORTHO05D013824 1.8e-16 89.4 45 95.6
Ciclev10010223m.g Citrus clementina HOM05D000435 ORTHO05D000430 3.1e-16 88.6 73 68.5
FvH4_3g42410 Fragaria vesca HOM05D000435 ORTHO05D000430 5.3e-16 87.8 94 53.2
FAN11G3608 Fragaria x ananassa HOM05D000435 ORTHO05D000430 5.3e-16 87.8 94 53.2
FAN28G0967 Fragaria x ananassa HOM05D000435 ORTHO05D000430 5.3e-16 87.8 94 53.2
COL.COLO4_07733 Corchorus olitorius HOM05D003572 ORTHO05D004118 6.9e-16 87.4 70 71.4
Medtr5g096390 Medicago truncatula HOM05D000435 ORTHO05D000430 6.9e-16 87.4 101 53.5
FAN25G2805 Fragaria x ananassa HOM05D000435 ORTHO05D000430 1.5e-15 86.3 84 54.8
arahy.Tifrunner.gnm1.ann1.64V7P3 Arachis hypogaea HOM05D000435 ORTHO05D000430 2.6e-15 85.5 74 63.5
FAN16G3565 Fragaria x ananassa HOM05D000435 ORTHO05D000430 9.9e-15 83.6 94 51.1
arahy.Tifrunner.gnm1.ann1.D8MFXN Arachis hypogaea HOM05D000435 ORTHO05D000430 3.8e-14 81.6 86 57.0
ECA236G1471 Erigeron canadensis HOM05D000435 ORTHO05D000430 4.9e-14 81.3 83 55.4
AUR62017136 Chenopodium quinoa HOM05D000435 ORTHO05D000430 6.4e-14 80.9 71 63.4
Migut.M01629 Erythranthe guttata HOM05D000435 ORTHO05D000430 6.4e-14 80.9 71 64.8
SGA_v2.0_scaffold171G38846 Striga asiatica HOM05D000435 ORTHO05D000430 6.4e-14 80.9 66 63.6
Eucgr.F03676 Eucalyptus grandis HOM05D000435 ORTHO05D000430 2.4e-13 79.0 71 52.1
vmacro09627 Vaccinium macrocarpon HOM05D000435 ORTHO05D000430 3.2e-13 78.6 79 58.2
Actinidia03625 Actinidia chinensis HOM05D000435 ORTHO05D000430 4.2e-13 78.2 62 64.5
Oeu005470.2 Olea europaea HOM05D000435 ORTHO05D000430 4.2e-13 78.2 53 77.4
THA.LOC104815690 Tarenaya hassleriana HOM05D000435 ORTHO05D000430 4.2e-13 78.2 62 69.4
EL10Ac4g07534 Beta vulgaris HOM05D000435 ORTHO05D000430 9.3e-13 77.0 71 60.6
AUR62035671 Chenopodium quinoa HOM05D000435 ORTHO05D000430 2.1e-12 75.9 71 59.2
TPR.G1281 Trifolium pratense HOM05D000435 ORTHO05D013824 2.1e-12 75.9 49 73.5
Lsat_1_v5_gn_7_114141 Lactuca sativa HOM05D000435 ORTHO05D000430 2.7e-12 75.5 89 53.9
Ca_12447_v3 Cicer arietinum L. HOM05D000435 ORTHO05D000430 4.6e-12 74.7 68 63.2
CANSAT11G0821 Cannabis sativa HOM05D000435 ORTHO05D000430 6.0e-12 74.3 72 62.5
PSO541G1261 Papaver somniferum HOM05D000435 ORTHO05D000430 6.0e-12 74.3 76 55.3
PSO675G1718 Papaver somniferum HOM05D000435 ORTHO05D000430 6.0e-12 74.3 76 55.3
Aqoxy3G03979 Aquilegia oxysepala HOM05D000435 ORTHO05D000430 6.6e-11 70.9 71 50.7
Nn2g15498 Nelumbo nucifera HOM05D000435 ORTHO05D000430 6.6e-11 70.9 71 53.5
Nitab4.5_0002072g0130 Nicotiana tabacum HOM05D000435 ORTHO05D013824 8.7e-11 70.5 40 82.5
Sed0013125 Sechium edule HOM05D000435 ORTHO05D000430 1.9e-10 69.3 71 53.5
Phvul.006G059212 Phaseolus vulgaris HOM05D000435 ORTHO05D000430 1.3e-09 66.6 71 53.5
VMungo0540G1677 Vigna mungo HOM05D003572 ORTHO05D004118 1.6e-09 66.2 71 52.1
HanXRQChr11g0334421 Helianthus annuus HOM05D000435 ORTHO05D000430 2.1e-09 65.9 67 53.7
Nitab4.5_0000085g0110 Nicotiana tabacum HOM05D000435 ORTHO05D013824 8.1e-09 63.9 35 88.6
Glyma.18G074800 Glycine max HOM05D000435 ORTHO05D000430 1.1e-08 63.5 71 50.7
CARHR087810 Cardamine hirsuta HOM05D000435 ORTHO05D000430 1.4e-08 63.2 51 66.7
Lalb_Chr20g0114061 Lupinus albus HOM05D000435 ORTHO05D000430 1.8e-08 62.8 71 52.1
arahy.Tifrunner.gnm1.ann1.2NP6SE Arachis hypogaea HOM05D000435 ORTHO05D000430 2.4e-08 62.4 102 46.1
A01p40340 Brassica napus HOM05D000435 ORTHO05D000430 2.4e-08 62.4 51 66.7
BraA01t04069Z Brassica rapa HOM05D000435 ORTHO05D000430 2.4e-08 62.4 51 66.7
Sp3g11390 Schrenkiella parvula HOM05D000435 ORTHO05D000430 2.4e-08 62.4 51 66.7
Aa31LG8G420 Aethionema arabicum HOM05D000435 ORTHO05D000430 3.1e-08 62.0 66 53.0
arahy.Tifrunner.gnm1.ann1.1C3JIX Arachis hypogaea HOM05D000435 ORTHO05D000430 3.1e-08 62.0 105 44.8
Thhalv10020198m.g Eutrema salsugineum HOM05D000435 ORTHO05D000430 6.9e-08 60.8 51 64.7
Rhsim04G0010800 Rhododendron simsii HOM05D000435 ORTHO05D000430 6.9e-08 60.8 98 44.9
C01p51870 Brassica napus HOM05D000435 ORTHO05D000430 9.0e-08 60.5 51 64.7
BolC1t05135H Brassica oleracea HOM05D000435 ORTHO05D000430 9.0e-08 60.5 51 64.7
BcaB04g21003 Brassica carinata HOM05D000435 ORTHO05D000430 1.2e-07 60.1 51 64.7
AL3G24980 Arabidopsis lyrata HOM05D000435 ORTHO05D000430 1.5e-07 59.7 51 64.7
Carub.0003s1257 Capsella rubella HOM05D000435 ORTHO05D000430 1.5e-07 59.7 51 64.7
Sp1g41420 Schrenkiella parvula HOM05D000435 ORTHO05D371061 1.5e-07 59.7 85 45.9
AT3G13220 Arabidopsis thaliana HOM05D000435 ORTHO05D000430 3.4e-07 58.5 51 62.7
FAN21G0356 Fragaria x ananassa HOM05D000435 ORTHO05D000430 9.9e-07 57.0 47 57.4
ClCG10G004470 Citrullus lanatus HOM05D000435 ORTHO05D000430 1.3e-06 56.6 72 41.7
Cc05_g15220 Coffea canephora HOM05D000435 ORTHO05D000430 1.7e-06 56.2 102 42.2
MBI15_g38526_MAGBIO Magnolia biondii HOM05D000435 ORTHO05D000430 6.4e-06 54.3 72 48.6


User provided reference genes

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