Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G778.6 Capsicum annuum HOM05D004374 ORTHO05D005430 1.4e-96 356.3 188 100.0
CAN.G1315.2 Capsicum annuum HOM05D004374 ORTHO05D005430 1.2e-77 293.5 201 81.1
CAN.G1963.3 Capsicum annuum HOM05D004374 ORTHO05D005430 2.9e-65 252.3 228 65.4
Peaxi162Scf00088g01332 Petunia axillaris HOM05D004374 ORTHO05D005430 2.6e-61 239.2 206 67.5
PGSC0003DMG400020805 Solanum tuberosum HOM05D004374 ORTHO05D005430 7.0e-59 231.1 220 65.0
Solyc07g007940.3 Solanum lycopersicum HOM05D004374 ORTHO05D005430 7.8e-58 227.6 229 62.0
Sopen07g003820 Solanum pennellii HOM05D004374 ORTHO05D005430 1.0e-57 227.3 229 62.0
Nitab4.5_0009218g0020 Nicotiana tabacum HOM05D004374 ORTHO05D005430 1.4e-54 216.9 220 59.5
PGSC0003DMG400030909 Solanum tuberosum HOM05D004374 ORTHO05D005430 4.4e-53 211.8 192 67.7
Nitab4.5_0005465g0010 Nicotiana tabacum HOM05D004374 ORTHO05D005430 1.6e-50 203.4 190 62.1
Nitab4.5_0002008g0060 Nicotiana tabacum HOM05D004374 ORTHO05D005430 4.4e-45 185.3 178 59.0
Nitab4.5_0000245g0210 Nicotiana tabacum HOM05D004374 ORTHO05D005430 3.5e-42 175.6 190 56.3
Hma1.2p1_0343F.1_g130960 Hydrangea macrophylla HOM05D004374 ORTHO05D005430 2.8e-39 166.0 206 46.6
Hma1.2p1_1220F.1_g268070 Hydrangea macrophylla HOM05D004374 ORTHO05D005430 3.6e-39 165.6 218 45.9
Dinv41475 Davidia involucrata HOM05D004374 ORTHO05D005430 6.2e-39 164.9 193 48.7
Nn8g39541 Nelumbo nucifera HOM05D004374 ORTHO05D005430 1.5e-37 160.2 196 46.4
SalBow1G4424 Salvia bowleyana HOM05D004374 ORTHO05D005430 1.5e-37 160.2 222 46.4
MSTRG.26430 Avicennia marina HOM05D004374 ORTHO05D005430 9.9e-37 157.5 211 46.0
Migut.K00426 Erythranthe guttata HOM05D004374 ORTHO05D005430 8.3e-36 154.5 196 47.4
TAR626G1960 Trochodendron aralioides HOM05D004374 ORTHO05D005430 1.9e-35 153.3 195 47.2
Ciclev10002076m.g Citrus clementina HOM05D004374 ORTHO05D005430 5.4e-35 151.8 198 46.0
Ciclev10032301m.g Citrus clementina HOM05D004374 ORTHO05D005430 5.4e-35 151.8 198 44.9
Cc06_g08080 Coffea canephora HOM05D004374 ORTHO05D005430 1.6e-34 150.2 151 53.0
GSVIVG01015588001 Vitis vinifera HOM05D004374 ORTHO05D005430 1.3e-33 147.1 195 44.1
TAR383G0672 Trochodendron aralioides HOM05D004374 ORTHO05D005430 3.9e-33 145.6 209 44.5
vmacro07719 Vaccinium macrocarpon HOM05D004374 ORTHO05D005430 5.1e-33 145.2 201 44.8
Rhsim01G0061800 Rhododendron simsii HOM05D004374 ORTHO05D005430 8.6e-33 144.4 193 46.6
vmacro15378 Vaccinium macrocarpon HOM05D004374 ORTHO05D005430 2.5e-32 142.9 182 48.9
unitig_0.g2039 Utricularia gibba HOM05D004374 ORTHO05D005430 3.3e-32 142.5 209 41.6
SGA_v2.0_scaffold138G35279 Striga asiatica HOM05D004374 ORTHO05D005430 9.5e-32 141.0 208 42.3
HanXRQChr06g0168691 Helianthus annuus HOM05D004374 ORTHO05D005430 1.6e-31 140.2 193 44.0
Sabra06G0048000 Salix brachista HOM05D004374 ORTHO05D005430 3.6e-31 139.0 198 41.4
SGA_v2.0_scaffold154G37188 Striga asiatica HOM05D004374 ORTHO05D005430 6.2e-31 138.3 190 43.2
ClCG11G003340 Citrullus lanatus HOM05D004374 ORTHO05D005430 1.8e-30 136.7 195 43.6
Oeu032454.1 Olea europaea HOM05D004374 ORTHO05D005430 1.8e-30 136.7 209 43.1
TWI34G0112 Tripterygium wilfordii HOM05D004374 ORTHO05D005430 4.0e-30 135.6 195 41.5
Dinv36480 Davidia involucrata HOM05D004374 ORTHO05D005430 5.2e-30 135.2 160 47.5
CSS0004446 Camellia sinensis var. sinensis HOM05D004374 ORTHO05D005430 6.8e-30 134.8 154 48.1
Potri.006G065800 Populus trichocarpa HOM05D004374 ORTHO05D005430 1.5e-29 133.7 158 44.9
Atru.chr12.84 Acer truncatum HOM05D004374 ORTHO05D005430 2.6e-29 132.9 196 40.8
PGR042G2992 Punica granatum HOM05D004374 ORTHO05D005430 3.4e-29 132.5 193 40.4
Eucgr.C01384 Eucalyptus grandis HOM05D004374 ORTHO05D005430 5.8e-29 131.7 197 39.6
QL02p089838 Quercus lobata HOM05D004374 ORTHO05D005430 5.8e-29 131.7 196 40.8
TWI34G1386 Tripterygium wilfordii HOM05D004374 ORTHO05D005430 9.9e-29 131.0 195 42.1
Cfa008808 Carpinus fangiana HOM05D004374 ORTHO05D005430 3.8e-28 129.0 197 40.1
MELO3C004466.2 Cucumis melo HOM05D004374 ORTHO05D005430 3.8e-28 129.0 194 42.3
Prupe.1G493600 Prunus persica HOM05D004374 ORTHO05D005430 8.4e-28 127.9 193 41.5
Duzib168G1544 Durio zibethinus HOM05D004374 ORTHO05D005430 1.1e-27 127.5 179 40.2
MBI04_g39649_MAGBIO Magnolia biondii HOM05D004374 ORTHO05D005430 2.4e-27 126.3 196 38.3
CsaV3_2G003190 Cucumis sativus L. HOM05D002754 ORTHO05D003271 3.2e-27 125.9 195 41.5
Psat4g038960 Pisum sativum HOM05D004374 ORTHO05D005430 4.1e-27 125.6 153 44.4
Cpa.g.sc46.39 Carica papaya HOM05D004374 ORTHO05D005430 5.4e-27 125.2 198 40.4
CANSAT11G1308 Cannabis sativa HOM05D004374 ORTHO05D005430 9.2e-27 124.4 193 42.5
Lsat_1_v5_gn_7_43761 Lactuca sativa HOM05D004374 ORTHO05D005430 7.8e-26 121.3 199 37.7
Thecc.09G131900 Theobroma cacao HOM05D004374 ORTHO05D005430 1.0e-25 120.9 180 38.9
TPR.G24785 Trifolium pratense HOM05D004374 ORTHO05D005430 1.0e-25 120.9 198 38.4
DCAR_017779 Daucus carota HOM05D004374 ORTHO05D005430 1.3e-25 120.6 224 36.2
Ca_06940_v3 Cicer arietinum L. HOM05D004374 ORTHO05D005430 1.7e-25 120.2 188 40.4
Lalb_Chr12g0197301 Lupinus albus HOM05D004374 ORTHO05D005430 1.7e-25 120.2 205 36.6
Manes.06G047300 Manihot esculenta HOM05D004374 ORTHO05D005430 2.3e-25 119.8 194 38.1
Actinidia21954 Actinidia chinensis HOM05D004374 ORTHO05D005430 3.0e-25 119.4 139 48.2
FAN05G4736 Fragaria x ananassa HOM05D004374 ORTHO05D005430 5.1e-25 118.6 180 40.0
Glyma.13G159900 Glycine max HOM05D004374 ORTHO05D005430 5.1e-25 118.6 153 42.5
Aqoxy4G00722 Aquilegia oxysepala HOM05D004374 ORTHO05D005430 6.6e-25 118.2 195 37.4
Phvul.003G168700 Phaseolus vulgaris HOM05D004374 ORTHO05D005430 6.6e-25 118.2 190 38.9
Sed0026824 Sechium edule HOM05D004374 ORTHO05D005430 8.6e-25 117.9 107 58.9
ECA240G2062 Erigeron canadensis HOM05D004374 ORTHO05D005430 2.5e-24 116.3 201 38.3
AUR62013310 Chenopodium quinoa HOM05D004374 ORTHO05D005430 3.3e-24 115.9 148 43.2
Lalb_Chr13g0301591 Lupinus albus HOM05D004374 ORTHO05D005430 5.6e-24 115.2 186 36.6
MD05G1013300 Malus domestica HOM05D004374 ORTHO05D005430 1.2e-23 114.0 186 41.9
Medtr4g115320 Medicago truncatula HOM05D004374 ORTHO05D005430 1.2e-23 114.0 203 36.0
arahy.Tifrunner.gnm1.ann1.9N6VAH Arachis hypogaea HOM05D004374 ORTHO05D005430 2.8e-23 112.8 190 37.9
VMungo1215G2312 Vigna mungo HOM05D004374 ORTHO05D005430 2.8e-23 112.8 184 39.1
EL10Ac8g18718 Beta vulgaris HOM05D004374 ORTHO05D005430 3.6e-23 112.5 201 36.3
PSO017G1812 Papaver somniferum HOM05D004374 ORTHO05D005430 3.6e-23 112.5 200 38.5
AUR62011174 Chenopodium quinoa HOM05D004374 ORTHO05D005430 6.2e-23 111.7 186 40.3
Gohir.D05G015500 Gossypium hirsutum HOM05D004374 ORTHO05D005430 6.2e-23 111.7 178 38.8
AUR62025401 Chenopodium quinoa HOM05D004374 ORTHO05D005430 1.1e-22 110.9 162 40.1
Haze_11824 Corylus avellana HOM05D004374 ORTHO05D005430 1.1e-22 110.9 194 38.1
AUR62008844 Chenopodium quinoa HOM05D004374 ORTHO05D005430 1.8e-22 110.2 159 40.3
FAN09G4040 Fragaria x ananassa HOM05D004374 ORTHO05D005430 4.0e-22 109.0 138 42.0
RcHm_v2.0_Chr2g0138971 Rosa chinensis HOM05D004374 ORTHO05D005430 5.2e-22 108.6 194 37.1
arahy.Tifrunner.gnm1.ann1.8FF2M6 Arachis hypogaea HOM05D004374 ORTHO05D005430 9.0e-22 107.8 192 36.5
Gohir.A05G014400 Gossypium hirsutum HOM05D004374 ORTHO05D005430 9.0e-22 107.8 183 37.7
Gorai.009G015600 Gossypium raimondii HOM05D004374 ORTHO05D005430 1.2e-21 107.5 185 36.8
PSO478G4198 Papaver somniferum HOM05D004374 ORTHO05D005430 2.0e-21 106.7 198 39.4
Sc18g0000370 Simmondsia chinensis HOM05D004374 ORTHO05D005430 2.0e-21 106.7 208 34.1
Lj3g0021552 Lotus japonicus HOM05D004374 ORTHO05D005430 2.6e-21 106.3 187 35.3
Lj4g0025213 Lotus japonicus HOM05D004374 ORTHO05D005430 2.6e-21 106.3 187 35.8
Lj3g0009396 Lotus japonicus HOM05D004374 ORTHO05D005430 4.4e-21 105.5 187 35.3
FvH4_6g31820 Fragaria vesca HOM05D004374 ORTHO05D005430 9.9e-21 104.4 148 39.2
FAN14G1328 Fragaria x ananassa HOM05D004374 ORTHO05D005430 9.9e-21 104.4 148 39.2
HPP92_020472 Vanilla planifolia HOM05D004374 ORTHO05D005430 2.9e-20 102.8 153 38.6
Aa31LG9G14420 Aethionema arabicum HOM05D004374 ORTHO05D005430 3.8e-20 102.4 152 38.8
HPP92_026160 Vanilla planifolia HOM05D004374 ORTHO05D005430 4.9e-20 102.1 153 38.6
Thhalv10000991m.g Eutrema salsugineum HOM05D004374 ORTHO05D005430 8.4e-20 101.3 193 35.8
Hund26613 Selenicereus undatus HOM05D004374 ORTHO05D005430 1.4e-19 100.5 202 37.1
Thhalv10010555m.g Eutrema salsugineum HOM05D004374 ORTHO05D005430 4.2e-19 99.0 193 36.3
Medtr3g113180 Medicago truncatula HOM05D004374 ORTHO05D005430 5.4e-19 98.6 198 34.3
arahy.Tifrunner.gnm1.ann1.RD7K84 Arachis hypogaea HOM05D004374 ORTHO05D005430 9.3e-19 97.8 191 36.6
Carub.0005s1981 Capsella rubella HOM05D004374 ORTHO05D005430 9.3e-19 97.8 193 35.2
Hund26538 Selenicereus undatus HOM05D004374 ORTHO05D005430 9.3e-19 97.8 215 34.4
AL5G34180 Arabidopsis lyrata HOM05D004374 ORTHO05D005430 1.2e-18 97.4 201 35.3
arahy.Tifrunner.gnm1.ann1.QKGT17 Arachis hypogaea HOM05D004374 ORTHO05D005430 1.2e-18 97.4 191 36.6
FAN02G2909 Fragaria x ananassa HOM05D004374 ORTHO05D005430 2.1e-18 96.7 190 33.7
AT3G53270 Arabidopsis thaliana HOM05D004374 ORTHO05D005430 4.6e-18 95.5 149 38.3
Zm00001eb288690 Zea mays HOM05D004374 ORTHO05D005430 6.0e-18 95.1 105 43.8
Zm00001eb030790 Zea mays HOM05D004374 ORTHO05D005430 7.8e-18 94.7 105 43.8
Zm00001eb030830 Zea mays HOM05D004374 ORTHO05D005430 7.8e-18 94.7 105 43.8
AL5G21410 Arabidopsis lyrata HOM05D004374 ORTHO05D005430 1.0e-17 94.4 193 36.3
BraA07t29837Z Brassica rapa HOM05D004374 ORTHO05D005430 1.3e-17 94.0 149 36.2
Sp5g09070 Schrenkiella parvula HOM05D004374 ORTHO05D005430 1.3e-17 94.0 145 37.2
THA.LOC104826552 Tarenaya hassleriana HOM05D004374 ORTHO05D005430 1.3e-17 94.0 194 32.0
BcaB02g07796 Brassica carinata HOM05D004374 ORTHO05D005430 3.0e-17 92.8 149 36.2
ATR0307G110 Amborella trichopoda HOM05D004374 ORTHO05D005430 5.1e-17 92.0 150 34.7
CSS0020843 Camellia sinensis var. sinensis HOM05D004374 ORTHO05D005430 1.5e-16 90.5 282 29.4
A07p21500 Brassica napus HOM05D004374 ORTHO05D005430 1.9e-16 90.1 193 32.1
BolC6t37295H Brassica oleracea HOM05D004374 ORTHO05D005430 2.5e-16 89.7 193 32.1
Actinidia40498 Actinidia chinensis HOM05D004374 ORTHO05D005430 3.3e-16 89.4 143 37.8
C06p21110 Brassica napus HOM05D004374 ORTHO05D005430 3.3e-16 89.4 193 32.6
CiPaw.05G118700 Carya illinoinensis HOM05D004374 ORTHO05D005430 5.6e-16 88.6 83 53.0
Potri.004G126720 Populus trichocarpa HOM05D004374 ORTHO05D005430 7.3e-16 88.2 85 54.1
Sp1g13120 Schrenkiella parvula HOM05D004374 ORTHO05D005430 7.3e-16 88.2 193 32.1
PSO384G0227 Papaver somniferum HOM05D004374 ORTHO05D005430 3.6e-15 85.9 105 45.7
Potri.004G126760 Populus trichocarpa HOM05D004374 ORTHO05D005430 4.8e-15 85.5 83 55.4
Os10g0493800 Oryza sativa ssp. japonica HOM05D004374 ORTHO05D005430 6.2e-15 85.1 162 34.0
Lj7A483G16 Lonicera japonica HOM05D004374 ORTHO05D005430 5.3e-14 82.0 64 57.8
Lj5A680G20 Lonicera japonica HOM05D004374 ORTHO05D005430 1.2e-13 80.9 63 58.7
Ah.09g224840 Amaranthus hybridus HOM05D004374 ORTHO05D005430 1.5e-13 80.5 252 27.8
C04p05170 Brassica napus HOM05D000111 ORTHO05D000134 1.5e-13 80.5 110 35.5
COL.COLO4_35152 Corchorus olitorius HOM05D004374 ORTHO05D005430 1.5e-13 80.5 146 34.2
SEGI_33846 Sequoiadendron giganteum HOM05D004374 ORTHO05D005430 5.4e-11 72.0 175 27.4
CARHR163170 Cardamine hirsuta HOM05D004374 ORTHO05D005430 1.6e-10 70.5 70 48.6
Nn8g39548 Nelumbo nucifera HOM05D004374 ORTHO05D005430 2.7e-10 69.7 116 38.8
Carub.0001s3232 Capsella rubella HOM05D004374 ORTHO05D005430 1.6e-07 60.5 144 30.6
CDE06G2323 Ceratophyllum demersum HOM05D004374 ORTHO05D005430 2.1e-07 60.1 181 28.7
TWI09G0688 Tripterygium wilfordii HOM05D004374 ORTHO05D005430 2.8e-07 59.7 104 35.6
Mapoly0001s0311 Marchantia polymorpha HOM05D004374 ORTHO05D005430 4.0e-06 55.8 106 33.0


User provided reference genes

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