Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G745.25 Capsicum annuum HOM05D004190 ORTHO05D004692 1.1e-65 253.1 123 100.0
CAN.G1733.1 Capsicum annuum HOM05D004190 ORTHO05D004692 6.7e-42 174.1 107 79.4
CAN.G1733.7 Capsicum annuum HOM05D000006 ORTHO05D004030 9.9e-38 160.2 118 66.9
PGSC0003DMG400026344 Solanum tuberosum HOM05D004190 ORTHO05D004692 1.8e-26 122.9 110 60.0
CAN.G745.27 Capsicum annuum HOM05D004190 ORTHO05D004692 3.0e-26 122.1 100 60.0
Solyc11g068740.2 Solanum lycopersicum HOM05D004190 ORTHO05D004692 8.7e-26 120.6 113 57.5
Sopen11g027450 Solanum pennellii HOM05D004190 ORTHO05D004692 8.7e-26 120.6 113 57.5
CAN.G745.23 Capsicum annuum HOM05D004190 ORTHO05D004692 2.5e-25 119.0 155 43.9
Nitab4.5_0003516g0050 Nicotiana tabacum HOM05D004190 ORTHO05D004692 4.3e-25 118.2 108 56.5
CAN.G1733.5 Capsicum annuum HOM05D004190 ORTHO05D004692 5.7e-25 117.9 155 43.2
Nitab4.5_0001135g0020 Nicotiana tabacum HOM05D004190 ORTHO05D004692 9.7e-25 117.1 108 55.6
CAN.G1733.2 Capsicum annuum HOM05D004190 ORTHO05D004692 1.1e-23 113.6 152 43.4
Peaxi162Scf00224g00513 Petunia axillaris HOM05D004190 ORTHO05D004692 1.2e-22 110.2 108 55.6
CAN.G745.26 Capsicum annuum HOM05D004190 ORTHO05D004692 2.2e-21 105.9 158 44.3
CAN.G1733.3 Capsicum annuum HOM05D004190 ORTHO05D004692 5.0e-21 104.8 85 60.0
Hma1.2p1_0220F.1_g093040 Hydrangea macrophylla HOM05D004190 ORTHO05D004692 1.7e-16 89.7 101 44.6
Hma1.2p1_1227F.1_g268580 Hydrangea macrophylla HOM05D004190 ORTHO05D004692 1.7e-16 89.7 101 44.6
Sed0024869 Sechium edule HOM05D004190 ORTHO05D004692 2.2e-16 89.4 109 45.9
PGSC0003DMG400024773 Solanum tuberosum HOM05D004190 ORTHO05D004692 3.7e-16 88.6 100 48.0
Prupe.6G076700 Prunus persica HOM05D004190 ORTHO05D004692 1.8e-15 86.3 111 47.7
ClCG03G001470 Citrullus lanatus HOM05D004190 ORTHO05D004692 2.4e-15 85.9 115 47.0
CsaV3_1G034280 Cucumis sativus L. HOM05D004190 ORTHO05D004692 4.1e-15 85.1 115 45.2
MD03G1092700 Malus domestica HOM05D004190 ORTHO05D004692 3.4e-14 82.0 110 43.6
Gohir.A13G227300 Gossypium hirsutum HOM05D004190 ORTHO05D004692 4.5e-14 81.6 108 42.6
Oeu048854.1 Olea europaea HOM05D004190 ORTHO05D004692 4.5e-14 81.6 112 42.9
PGSC0003DMG400026343 Solanum tuberosum HOM05D004190 ORTHO05D004692 5.9e-14 81.3 64 60.9
Gorai.013G263700 Gossypium raimondii HOM05D004190 ORTHO05D004692 7.7e-14 80.9 108 42.6
Sed0018693 Sechium edule HOM05D004190 ORTHO05D004692 7.7e-14 80.9 111 45.0
Nn2g13344 Nelumbo nucifera HOM05D004190 ORTHO05D004692 1.7e-13 79.7 108 44.4
RcHm_v2.0_Chr5g0064931 Rosa chinensis HOM05D004190 ORTHO05D004692 1.7e-13 79.7 111 44.1
Duzib150G1353 Durio zibethinus HOM05D004190 ORTHO05D004692 3.8e-13 78.6 115 40.9
FvH4_3g36180 Fragaria vesca HOM05D004190 ORTHO05D004692 3.8e-13 78.6 111 43.2
FAN16G2398 Fragaria x ananassa HOM05D004190 ORTHO05D004692 5.0e-13 78.2 111 43.2
Gohir.D13G232900 Gossypium hirsutum HOM05D004190 ORTHO05D004692 6.5e-13 77.8 108 41.7
MD11G1107500 Malus domestica HOM05D004190 ORTHO05D004692 8.5e-13 77.4 118 42.4
CAN.G1733.6 Capsicum annuum HOM05D004190 ORTHO05D004692 1.1e-12 77.0 54 70.4
FAN11G2049 Fragaria x ananassa HOM05D004190 ORTHO05D004692 1.4e-12 76.6 111 42.3
COL.COLO4_18512 Corchorus olitorius HOM05D004190 ORTHO05D004692 3.2e-12 75.5 110 44.5
FAN25G3130 Fragaria x ananassa HOM05D004190 ORTHO05D004692 5.5e-12 74.7 111 41.4
Rhsim13G0195100 Rhododendron simsii HOM05D004190 ORTHO05D004692 5.5e-12 74.7 103 41.7
TAR623G1294 Trochodendron aralioides HOM05D004190 ORTHO05D004692 5.5e-12 74.7 107 43.0
Atru.chr3.3912 Acer truncatum HOM05D004190 ORTHO05D004692 1.6e-11 73.2 107 41.1
Actinidia07264 Actinidia chinensis HOM05D004190 ORTHO05D004692 1.6e-11 73.2 105 40.0
CiPaw.04G135700 Carya illinoinensis HOM05D004190 ORTHO05D004692 2.1e-11 72.8 108 40.7
CDE02G2475 Ceratophyllum demersum HOM05D004190 ORTHO05D004692 2.1e-11 72.8 117 37.6
Duzib170G0106 Durio zibethinus HOM05D004190 ORTHO05D004692 2.1e-11 72.8 112 42.0
FAN21G2646 Fragaria x ananassa HOM05D004190 ORTHO05D004692 2.1e-11 72.8 111 41.4
PGSC0003DMG400044882 Solanum tuberosum HOM05D004190 ORTHO05D004692 2.1e-11 72.8 121 39.7
Cpa.g.sc81.141 Carica papaya HOM05D004190 ORTHO05D004692 2.7e-11 72.4 111 42.3
Thecc.09G321100 Theobroma cacao HOM05D004190 ORTHO05D004692 3.6e-11 72.0 108 38.0
TWI79G1380 Tripterygium wilfordii HOM05D004190 ORTHO05D004692 6.1e-11 71.2 107 41.1
Dinv08914 Davidia involucrata HOM05D004190 ORTHO05D004692 7.9e-11 70.9 103 37.9
Haze_24100 Corylus avellana HOM05D004190 ORTHO05D004692 1.0e-10 70.5 103 41.7
Manes.01G173632 Manihot esculenta HOM05D004190 ORTHO05D004692 1.4e-10 70.1 111 38.7
BraA10t43742Z Brassica rapa HOM05D000173 ORTHO05D000316 3.9e-10 68.6 119 37.8
Oeu002348.1 Olea europaea HOM05D004190 ORTHO05D004692 3.9e-10 68.6 100 40.0
Gorai.009G099200 Gossypium raimondii HOM05D004190 ORTHO05D004692 5.1e-10 68.2 105 37.1
Cc01_g08740 Coffea canephora HOM05D004190 ORTHO05D004692 6.7e-10 67.8 133 35.3
TWI31G0561 Tripterygium wilfordii HOM05D004190 ORTHO05D004692 8.8e-10 67.4 113 44.2
CANSAT54G1895 Cannabis sativa HOM05D004190 ORTHO05D004692 1.1e-09 67.0 118 39.0
Gohir.A05G095600 Gossypium hirsutum HOM05D004190 ORTHO05D004692 1.5e-09 66.6 105 37.1
Gohir.D05G095900 Gossypium hirsutum HOM05D004190 ORTHO05D004692 1.5e-09 66.6 105 36.2
PGR119G1862 Punica granatum HOM05D004190 ORTHO05D004692 1.5e-09 66.6 112 40.2
Sp6g21060 Schrenkiella parvula HOM05D004190 ORTHO05D004692 1.5e-09 66.6 112 35.7
Potri.009G031100 Populus trichocarpa HOM05D004190 ORTHO05D004692 2.0e-09 66.2 107 36.4
ATR0559G266 Amborella trichopoda HOM05D004190 ORTHO05D004692 5.7e-09 64.7 112 37.5
EL10Ac7g16022 Beta vulgaris HOM05D004190 ORTHO05D004692 5.7e-09 64.7 104 39.4
CiPaw.13G093900 Carya illinoinensis HOM05D004190 ORTHO05D004692 5.7e-09 64.7 103 37.9
QL01p031797 Quercus lobata HOM05D004190 ORTHO05D004692 5.7e-09 64.7 103 40.8
DCAR_002216 Daucus carota HOM05D002742 ORTHO05D002959 7.4e-09 64.3 104 37.5
Sabra09G0021900 Salix brachista HOM05D004190 ORTHO05D004692 9.7e-09 63.9 101 36.6
CSS0021452 Camellia sinensis var. sinensis HOM05D004190 ORTHO05D004692 1.3e-08 63.5 110 34.5
BcaC03g14013 Brassica carinata HOM05D004190 ORTHO05D004692 1.7e-08 63.2 118 36.4
BolC2t07349H Brassica oleracea HOM05D004190 ORTHO05D004692 1.7e-08 63.2 118 36.4
BraA03t10485Z Brassica rapa HOM05D004190 ORTHO05D004692 1.7e-08 63.2 104 34.6
Sc21g0005810 Simmondsia chinensis HOM05D004190 ORTHO05D004692 1.7e-08 63.2 120 35.0
THA.LOC104810778 Tarenaya hassleriana HOM05D004190 ORTHO05D004692 1.7e-08 63.2 109 39.4
BcaC04g19780 Brassica carinata HOM05D004190 ORTHO05D004692 3.7e-08 62.0 120 35.8
C09p51780 Brassica napus HOM05D000173 ORTHO05D004692 3.7e-08 62.0 120 35.8
BolC9t58040H Brassica oleracea HOM05D000173 ORTHO05D004692 3.7e-08 62.0 120 35.8
Ciclev10029152m.g Citrus clementina HOM05D004190 ORTHO05D004692 4.8e-08 61.6 111 36.9
Thhalv10014530m.g Eutrema salsugineum HOM05D004190 ORTHO05D004692 4.8e-08 61.6 112 33.0
CARHR285750 Cardamine hirsuta HOM05D004190 ORTHO05D004692 6.3e-08 61.2 113 38.9
C02p12490 Brassica napus HOM05D000173 ORTHO05D000316 1.1e-07 60.5 118 35.6
MBI05_g22031_MAGBIO Magnolia biondii HOM05D004190 ORTHO05D004692 1.1e-07 60.5 131 35.1
Thhalv10002683m.g Eutrema salsugineum HOM05D004190 ORTHO05D004692 1.8e-07 59.7 112 35.7
Hund18906 Selenicereus undatus HOM05D004190 ORTHO05D004692 1.8e-07 59.7 107 37.4
THA.LOC104814877 Tarenaya hassleriana HOM05D004190 ORTHO05D004692 1.8e-07 59.7 106 36.8
BcaB01g04586 Brassica carinata HOM05D004190 ORTHO05D004692 2.4e-07 59.3 105 32.4
BraA02t05794Z Brassica rapa HOM05D004190 ORTHO05D004692 2.4e-07 59.3 115 35.7
Lsat_1_v5_gn_3_111560 Lactuca sativa HOM05D004190 ORTHO05D004692 2.4e-07 59.3 110 38.2
Aa31sc23G430 Aethionema arabicum HOM05D004190 ORTHO05D004692 3.1e-07 58.9 101 35.6
Aqoxy4G02933 Aquilegia oxysepala HOM05D004190 ORTHO05D004692 3.1e-07 58.9 98 39.8
BcaC01g06528 Brassica carinata HOM05D004190 ORTHO05D004692 4.1e-07 58.5 116 34.5
Aa31LG4G15580 Aethionema arabicum HOM05D004190 ORTHO05D004692 1.2e-06 57.0 125 34.4
Ah.08g219540 Amaranthus hybridus HOM05D004190 ORTHO05D004692 1.5e-06 56.6 105 37.1
BcaB05g22507 Brassica carinata HOM05D004190 ORTHO05D004692 1.5e-06 56.6 112 34.8
Sc24g0002450 Simmondsia chinensis HOM05D004190 ORTHO05D004692 1.5e-06 56.6 96 38.5
GSVIVG01025031001 Vitis vinifera HOM05D006496 ORTHO05D008390 1.5e-06 56.6 102 33.3
Carub.0005s1285 Capsella rubella HOM05D004190 ORTHO05D004692 2.0e-06 56.2 114 35.1
vmacro03111 Vaccinium macrocarpon HOM05D006496 ORTHO05D008390 3.4e-06 55.5 105 35.2
GSVIVG01024954001 Vitis vinifera HOM05D004190 ORTHO05D004692 4.5e-06 55.1 101 33.7
CSS0042381 Camellia sinensis var. sinensis HOM05D006496 ORTHO05D008390 7.7e-06 54.3 109 33.9


User provided reference genes

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