Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G72.16 Capsicum annuum HOM05D008280 ORTHO05D010492 8.7e-111 403.7 207 100.0
CAN.G1126.5 Capsicum annuum HOM05D008280 ORTHO05D010492 5.8e-99 364.4 207 91.3
CAN.G1159.15 Capsicum annuum HOM05D008280 ORTHO05D010492 5.8e-99 364.4 207 91.3
CAN.G266.10 Capsicum annuum HOM05D008280 ORTHO05D010492 5.8e-99 364.4 207 91.3
Solyc00g020040.1 Solanum lycopersicum HOM05D008280 ORTHO05D010492 5.8e-99 364.4 207 91.3
SalBow1G8376 Salvia bowleyana HOM05D008280 ORTHO05D010492 1.3e-95 353.2 207 88.9
Lj2P1227T101 Lonicera japonica HOM05D008280 ORTHO05D010492 5.1e-95 351.3 207 88.9
DCAR_032445 Daucus carota HOM05D008280 ORTHO05D010492 6.7e-95 350.9 207 88.4
BNapus_Darmor_BZH_scaffold_234p00070 Brassica napus HOM05D008280 ORTHO05D010492 1.1e-94 350.1 207 88.9
BolSC28t60354H Brassica oleracea HOM05D008280 ORTHO05D010492 1.1e-94 350.1 207 88.9
BraSC159t45719Z Brassica rapa HOM05D008280 ORTHO05D010492 1.1e-94 350.1 207 88.9
BraSC77t46666Z Brassica rapa HOM05D008280 ORTHO05D010492 1.1e-94 350.1 207 88.9
CARHR282640 Cardamine hirsuta HOM05D008280 ORTHO05D010492 1.1e-94 350.1 207 88.9
Sp3g25740 Schrenkiella parvula HOM05D008280 ORTHO05D010492 1.1e-94 350.1 207 88.9
HanXRQMTg0579251 Helianthus annuus HOM05D008280 ORTHO05D010492 3.3e-94 348.6 207 88.4
ATMG00110 Arabidopsis thaliana HOM05D008280 ORTHO05D010492 7.4e-94 347.4 207 88.4
Lsat_1_v5_gn_7_99841 Lactuca sativa HOM05D008280 ORTHO05D010492 6.3e-93 344.4 207 87.4
RcHm_v2.0_MTg0498291 Rosa chinensis HOM05D008280 ORTHO05D010492 4.1e-92 341.7 207 87.0
Sed0015016 Sechium edule HOM05D008280 ORTHO05D010492 4.1e-92 341.7 207 86.0
BraSC48t46257Z Brassica rapa HOM05D008280 ORTHO05D010492 9.0e-92 340.5 196 90.3
Nn1g10160 Nelumbo nucifera HOM05D008280 ORTHO05D010492 2.0e-91 339.3 207 86.0
Medtr0141s0020 Medicago truncatula HOM05D008280 ORTHO05D010492 1.1e-89 333.6 207 84.5
TPR.G21718 Trifolium pratense HOM05D008280 ORTHO05D010492 1.1e-89 333.6 207 84.5
CANSAT16G0019 Cannabis sativa HOM05D008280 ORTHO05D010492 4.2e-89 331.6 207 86.0
Lj5g0023723 Lotus japonicus HOM05D008280 ORTHO05D010492 1.6e-88 329.7 207 84.5
LjContig00315g0024501 Lotus japonicus HOM05D008280 ORTHO05D010492 1.6e-88 329.7 207 84.5
Lalb_Chr00c29g0408141 Lupinus albus HOM05D008280 ORTHO05D010492 4.6e-88 328.2 207 83.1
Potri.007G061721 Populus trichocarpa HOM05D008280 ORTHO05D010492 2.5e-86 322.4 207 84.5
arahy.Tifrunner.gnm1.ann1.U3KMBF Arachis hypogaea HOM05D008280 ORTHO05D010492 9.1e-84 313.9 195 84.1
Eucgr.E02151 Eucalyptus grandis HOM05D008280 ORTHO05D010492 3.6e-80 302.0 176 88.6
CAN.G362.37 Capsicum annuum HOM05D008280 ORTHO05D010492 2.8e-77 292.4 207 77.3
Nitab4.5_0001796g0300 Nicotiana tabacum HOM05D008280 ORTHO05D010492 2.9e-74 282.3 207 75.8
Nitab4.5_0009703g0040 Nicotiana tabacum HOM05D008280 ORTHO05D010492 6.1e-72 274.6 161 88.2
Nitab4.5_0004471g0100 Nicotiana tabacum HOM05D008280 ORTHO05D010492 2.0e-70 269.6 176 83.5
Sed0028122 Sechium edule HOM05D008280 ORTHO05D010492 1.4e-68 263.5 207 70.0
arahy.Tifrunner.gnm1.ann1.9X0QWA Arachis hypogaea HOM05D008280 ORTHO05D010492 7.7e-67 257.7 185 75.7
arahy.Tifrunner.gnm1.ann1.TAQ3SD Arachis hypogaea HOM05D008280 ORTHO05D010492 3.8e-66 255.4 185 75.1
MBI05_g23314_MAGBIO Magnolia biondii HOM05D008280 ORTHO05D010492 1.4e-60 236.9 147 85.7
SHI07395 Sapria himalayana HOM05D008280 ORTHO05D010492 1.1e-57 227.3 153 78.4
Solyc11g028160.1 Solanum lycopersicum HOM05D008280 ORTHO05D010492 5.5e-57 224.9 145 82.8
TAR371G0473 Trochodendron aralioides HOM05D008280 ORTHO05D010492 1.6e-56 223.4 158 77.8
Medtr0094s0120 Medicago truncatula HOM05D008280 ORTHO05D010492 9.1e-52 207.6 132 81.1
CAN.G21.55 Capsicum annuum HOM05D008280 ORTHO05D010492 6.1e-48 194.9 114 89.5
Nn7g37645 Nelumbo nucifera HOM05D008280 ORTHO05D010492 1.2e-43 180.6 101 88.1
unitig_87.g27971 Utricularia gibba HOM05D008280 ORTHO05D010492 3.4e-38 162.5 99 86.9
HanXRQChr05g0151451 Helianthus annuus HOM05D008280 ORTHO05D010492 4.9e-37 158.7 96 83.3
Nitab4.5_0000978g0030 Nicotiana tabacum HOM05D008280 ORTHO05D010492 2.4e-36 156.4 90 92.2
CAN.G676.27 Capsicum annuum HOM05D008280 ORTHO05D010492 9.2e-36 154.5 105 79.0
Lsat_1_v5_gn_7_96601 Lactuca sativa HOM05D008280 ORTHO05D010492 1.5e-33 147.1 99 80.8
MBI09_g03548_MAGBIO Magnolia biondii HOM05D008280 ORTHO05D010492 1.5e-33 147.1 123 65.9
Psat1g132520 Pisum sativum HOM05D008280 ORTHO05D010492 1.5e-30 137.1 87 85.1
Ca_30339_v3 Cicer arietinum L. HOM05D008280 ORTHO05D010492 3.2e-28 129.4 145 53.8
HanXRQChr03g0087181 Helianthus annuus HOM05D008280 ORTHO05D010492 7.8e-27 124.8 99 72.7
VMungo0985G0011 Vigna mungo HOM05D008696 ORTHO05D002807 6.4e-21 105.1 69 81.2
Gohir.A13G092605 Gossypium hirsutum HOM05D008280 ORTHO05D010492 1.9e-20 103.6 67 83.6
Lj2C1224T22 Lonicera japonica HOM05D008280 ORTHO05D010492 3.2e-20 102.8 59 91.5
Solyc12g035890.3 Solanum lycopersicum HOM05D000964 ORTHO05D004047 1.8e-15 87.0 87 56.3
QL08p039717 Quercus lobata HOM05D008280 ORTHO05D010492 3.4e-14 82.8 61 77.0
SHI01507 Sapria himalayana HOM05D008280 ORTHO05D010492 4.7e-08 62.4 95 44.2


User provided reference genes

Program Settings