Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G653.3 Capsicum annuum HOM05D005573 ORTHO05D007161 3.1e-30 134.4 66 100.0
CAN.G1478.12 Capsicum annuum HOM05D005573 ORTHO05D007161 1.2e-29 132.5 65 100.0
CAN.G551.66 Capsicum annuum HOM05D005573 ORTHO05D007161 1.2e-29 132.5 65 100.0
CAN.G65.126 Capsicum annuum HOM05D005573 ORTHO05D007161 1.2e-29 132.5 65 100.0
CAN.G1183.7 Capsicum annuum HOM05D005573 ORTHO05D007161 3.5e-29 131.0 65 98.5
CAN.G129.6 Capsicum annuum HOM05D005573 ORTHO05D007161 1.0e-28 129.4 64 98.4
PGSC0003DMG400024039 Solanum tuberosum HOM05D005573 ORTHO05D007161 1.0e-28 129.4 65 98.5
Hma1.2p1_0248F.1_g102160 Hydrangea macrophylla HOM05D005573 ORTHO05D007161 2.5e-27 124.8 65 93.8
CAN.G100.47 Capsicum annuum HOM05D005573 ORTHO05D007161 4.2e-27 124.0 65 93.8
arahy.Tifrunner.gnm1.ann1.DMW7HF Arachis hypogaea HOM05D005573 ORTHO05D007161 9.4e-27 122.9 65 92.3
Migut.D01426 Erythranthe guttata HOM05D005573 ORTHO05D007161 9.4e-27 122.9 65 92.3
Lsat_1_v5_gn_3_99201 Lactuca sativa HOM05D005573 ORTHO05D007161 9.4e-27 122.9 65 92.3
HanXRQChr02g0041471 Helianthus annuus HOM05D005573 ORTHO05D007161 2.1e-26 121.7 65 93.8
HanXRQChr02g0044961 Helianthus annuus HOM05D005573 ORTHO05D007161 2.1e-26 121.7 65 93.8
HanXRQChr07g0201021 Helianthus annuus HOM05D005573 ORTHO05D007161 2.1e-26 121.7 65 93.8
HanXRQChr08g0210291 Helianthus annuus HOM05D005573 ORTHO05D007161 2.1e-26 121.7 65 93.8
HanXRQChr10g0289201 Helianthus annuus HOM05D005573 ORTHO05D007161 2.1e-26 121.7 65 93.8
HanXRQChr11g0326731 Helianthus annuus HOM05D005573 ORTHO05D007161 2.1e-26 121.7 65 93.8
HanXRQChr13g0413641 Helianthus annuus HOM05D005573 ORTHO05D007161 2.1e-26 121.7 65 93.8
HanXRQChr13g0413711 Helianthus annuus HOM05D005573 ORTHO05D007161 2.1e-26 121.7 65 93.8
HanXRQChr13g0413781 Helianthus annuus HOM05D005573 ORTHO05D007161 2.1e-26 121.7 65 93.8
HanXRQChr13g0413861 Helianthus annuus HOM05D005573 ORTHO05D007161 2.1e-26 121.7 65 93.8
HanXRQChr13g0413931 Helianthus annuus HOM05D005573 ORTHO05D007161 2.1e-26 121.7 65 93.8
HanXRQCPg0579941 Helianthus annuus HOM05D005573 ORTHO05D007161 2.1e-26 121.7 65 93.8
Solyc09g015310.3 Solanum lycopersicum HOM05D005573 ORTHO05D007161 4.7e-26 120.6 64 90.6
PGR111G0074 Punica granatum HOM05D005573 ORTHO05D007161 8.0e-26 119.8 65 87.7
Nn1g10181 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.0e-25 119.4 64 92.2
Nn1g10183 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.0e-25 119.4 64 92.2
Nn2g13212 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.0e-25 119.4 64 92.2
Nn423s46610 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.0e-25 119.4 64 92.2
Nn5g30925 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.0e-25 119.4 64 92.2
Eucgr.B02956 Eucalyptus grandis HOM05D005573 ORTHO05D007161 4.0e-25 117.5 65 84.6
Potri.013G163300 Populus trichocarpa HOM05D005573 ORTHO05D007161 4.0e-25 117.5 65 87.7
SalBow1G4134 Salvia bowleyana HOM05D005573 ORTHO05D007161 4.0e-25 117.5 66 86.4
EL10As27g24246 Beta vulgaris HOM05D000216 ORTHO05D007161 5.2e-25 117.1 66 89.4
Oeu012806.1 Olea europaea HOM05D005573 ORTHO05D007161 8.8e-25 116.3 63 87.3
CAN.G331.1 Capsicum annuum HOM05D005573 ORTHO05D007161 3.4e-24 114.4 66 83.3
Medtr4g051220 Medicago truncatula HOM05D005573 ORTHO05D007161 4.4e-24 114.0 65 87.7
Nn6g33243 Nelumbo nucifera HOM05D005573 ORTHO05D007161 4.4e-24 114.0 64 87.5
Lalb_Chr15g0080691 Lupinus albus HOM05D005573 ORTHO05D007161 9.8e-24 112.8 64 85.9
LjContig00318g0014176 Lotus japonicus HOM05D005573 ORTHO05D007161 1.3e-23 112.5 65 84.6
PSO548G0019 Papaver somniferum HOM05D005573 ORTHO05D007161 1.7e-23 112.1 64 87.5
Lj2P1237T91 Lonicera japonica HOM05D005573 ORTHO05D007161 2.8e-23 111.3 67 85.1
Lj2P1239T179 Lonicera japonica HOM05D005573 ORTHO05D007161 2.8e-23 111.3 67 85.1
Phvul.008G150500 Phaseolus vulgaris HOM05D005573 ORTHO05D007161 2.8e-23 111.3 63 82.5
TWI60G0396 Tripterygium wilfordii HOM05D005573 ORTHO05D007161 2.8e-23 111.3 65 84.6
Solyc09g015330.2 Solanum lycopersicum HOM05D005573 ORTHO05D007161 4.8e-23 110.5 64 87.5
DCAR_032486 Daucus carota HOM05D005573 ORTHO05D007161 3.1e-22 107.8 65 81.5
Gohir.A10G100366 Gossypium hirsutum HOM05D005573 ORTHO05D007161 3.1e-22 107.8 66 80.3
Sed0002328 Sechium edule HOM05D005573 ORTHO05D007161 3.1e-22 107.8 64 84.4
Sed0008322 Sechium edule HOM05D005573 ORTHO05D007161 3.1e-22 107.8 64 84.4
Gohir.D04G083800 Gossypium hirsutum HOM05D005573 ORTHO05D007161 4.1e-22 107.5 65 81.5
Gohir.A07G163636 Gossypium hirsutum HOM05D005573 ORTHO05D007161 9.1e-22 106.3 65 81.5
Gohir.A08G157500 Gossypium hirsutum HOM05D005573 ORTHO05D007161 9.1e-22 106.3 65 81.5
AL2G20730 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 5.9e-21 103.6 64 82.8
AL2G21420 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 5.9e-21 103.6 64 82.8
ATCG00380 Arabidopsis thaliana HOM05D005573 ORTHO05D007161 5.9e-21 103.6 64 82.8
CARHR282030 Cardamine hirsuta HOM05D005573 ORTHO05D007161 5.9e-21 103.6 64 82.8
Thhalv10010766m.g Eutrema salsugineum HOM05D005573 ORTHO05D007161 5.9e-21 103.6 64 82.8
A06p23260 Brassica napus HOM05D005573 ORTHO05D007161 1.7e-20 102.1 64 81.2
BNapus_Darmor_BZH_scaffold_287p00070 Brassica napus HOM05D005573 ORTHO05D007161 1.7e-20 102.1 64 81.2
BolSC45t60866H Brassica oleracea HOM05D005573 ORTHO05D007161 1.7e-20 102.1 64 81.2
BolSC45t60946H Brassica oleracea HOM05D005573 ORTHO05D007161 1.7e-20 102.1 64 81.2
BolSC46t60993H Brassica oleracea HOM05D005573 ORTHO05D007161 1.7e-20 102.1 64 81.2
BolSC46t61042H Brassica oleracea HOM05D005573 ORTHO05D007161 1.7e-20 102.1 64 81.2
BolSC49t61189H Brassica oleracea HOM05D005573 ORTHO05D007161 1.7e-20 102.1 64 81.2
BraA06t25428Z Brassica rapa HOM05D005573 ORTHO05D007161 1.7e-20 102.1 64 81.2
BraSC140t45578Z Brassica rapa HOM05D005573 ORTHO05D007161 1.7e-20 102.1 64 81.2
BraSC151t45711Z Brassica rapa HOM05D005573 ORTHO05D007161 1.7e-20 102.1 64 81.2
BraSC25t45875Z Brassica rapa HOM05D005573 ORTHO05D007161 1.7e-20 102.1 64 81.2
arahy.Tifrunner.gnm1.ann1.NAZW4C Arachis hypogaea HOM05D005573 ORTHO05D007161 1.2e-18 95.9 54 85.2
Solyc11g022620.1 Solanum lycopersicum HOM05D005573 ORTHO05D007161 1.8e-17 92.0 55 78.2
Lj4g0013543 Lotus japonicus HOM05D005573 ORTHO05D007161 4.0e-17 90.9 50 86.0
Nitab4.5_0000261g0250 Nicotiana tabacum HOM05D005573 ORTHO05D007161 2.6e-16 88.2 42 95.2
Glyma.01G153400 Glycine max HOM05D005573 ORTHO05D007161 5.7e-16 87.0 49 79.6
HanXRQChr13g0413681 Helianthus annuus HOM05D005573 ORTHO05D029920 1.3e-15 85.9 45 88.9
HanXRQChr13g0413751 Helianthus annuus HOM05D005573 ORTHO05D029920 1.3e-15 85.9 45 88.9
HanXRQChr13g0413831 Helianthus annuus HOM05D005573 ORTHO05D029920 1.3e-15 85.9 45 88.9
HanXRQChr13g0413901 Helianthus annuus HOM05D005573 ORTHO05D029920 1.3e-15 85.9 45 88.9
Zm00001eb039080 Zea mays HOM05D005573 ORTHO05D007161 1.7e-15 85.5 64 65.6
Zm00001eb039210 Zea mays HOM05D005573 ORTHO05D007161 1.7e-15 85.5 64 65.6
Zm00001eb435020 Zea mays HOM05D005573 ORTHO05D007161 1.7e-15 85.5 64 65.6
Zm00001eb435220 Zea mays HOM05D005573 ORTHO05D007161 1.7e-15 85.5 64 65.6
Zm00001eb435420 Zea mays HOM05D005573 ORTHO05D007161 1.7e-15 85.5 64 65.6
Zm00001eb435680 Zea mays HOM05D005573 ORTHO05D007161 1.7e-15 85.5 64 65.6
Zm00001eb438350 Zea mays HOM05D005573 ORTHO05D007161 1.7e-15 85.5 64 65.6
Zm00001eb440990 Zea mays HOM05D005573 ORTHO05D007161 1.7e-15 85.5 64 65.6
Oeu041772.1 Olea europaea HOM05D005573 ORTHO05D007161 2.0e-13 78.6 60 71.7
CAN.G63.13 Capsicum annuum HOM05D005573 ORTHO05D007161 1.0e-12 76.3 39 92.3
Nn055s41939 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.0e-12 76.3 37 97.3
Oeu056456.1 Olea europaea HOM05D005573 ORTHO05D007161 2.9e-12 74.7 38 92.1
EL10As12g24021 Beta vulgaris HOM05D005573 ORTHO05D007161 1.4e-09 65.9 64 51.6
Oeu052069.1 Olea europaea HOM05D005573 ORTHO05D007161 2.3e-09 65.1 36 83.3
CDE08G0454 Ceratophyllum demersum HOM05D000219 ORTHO05D000226 3.1e-09 64.7 37 78.4
Gohir.D09G179300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 8.9e-09 63.2 45 71.1
Gorai.006G201300 Gossypium raimondii HOM05D005573 ORTHO05D007161 8.9e-09 63.2 45 71.1
SEGI_18745 Sequoiadendron giganteum HOM05D005573 ORTHO05D007161 1.2e-08 62.8 68 51.5
TAR625G0941 Trochodendron aralioides HOM05D005573 ORTHO05D007161 8.3e-07 56.6 33 81.8
Oeu042745.1 Olea europaea HOM05D005573 ORTHO05D007161 1.1e-06 56.2 29 89.7


User provided reference genes

Program Settings