Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G551.66 Capsicum annuum HOM05D005573 ORTHO05D007161 3.0e-108 395.2 202 100.0
CAN.G65.126 Capsicum annuum HOM05D005573 ORTHO05D007161 3.0e-108 395.2 202 100.0
CAN.G1183.7 Capsicum annuum HOM05D005573 ORTHO05D007161 2.2e-106 389.0 202 98.5
Lsat_1_v5_gn_3_99201 Lactuca sativa HOM05D005573 ORTHO05D007161 1.4e-100 369.8 202 93.1
Hma1.2p1_0248F.1_g102160 Hydrangea macrophylla HOM05D005573 ORTHO05D007161 1.8e-100 369.4 202 93.6
HanXRQChr02g0041471 Helianthus annuus HOM05D005573 ORTHO05D007161 3.0e-100 368.6 202 93.6
HanXRQChr02g0044961 Helianthus annuus HOM05D005573 ORTHO05D007161 3.0e-100 368.6 202 93.6
HanXRQChr07g0201021 Helianthus annuus HOM05D005573 ORTHO05D007161 3.0e-100 368.6 202 93.6
HanXRQChr08g0210291 Helianthus annuus HOM05D005573 ORTHO05D007161 3.0e-100 368.6 202 93.6
HanXRQChr10g0289201 Helianthus annuus HOM05D005573 ORTHO05D007161 3.0e-100 368.6 202 93.6
HanXRQChr11g0326731 Helianthus annuus HOM05D005573 ORTHO05D007161 3.0e-100 368.6 202 93.6
HanXRQCPg0579941 Helianthus annuus HOM05D005573 ORTHO05D007161 3.0e-100 368.6 202 93.6
Migut.D01426 Erythranthe guttata HOM05D005573 ORTHO05D007161 1.1e-99 366.7 202 92.1
PGR111G0074 Punica granatum HOM05D005573 ORTHO05D007161 2.6e-99 365.5 202 91.6
arahy.Tifrunner.gnm1.ann1.DMW7HF Arachis hypogaea HOM05D005573 ORTHO05D007161 7.4e-99 364.0 202 91.1
Nn1g10181 Nelumbo nucifera HOM05D005573 ORTHO05D007161 3.7e-98 361.7 202 91.1
Nn1g10183 Nelumbo nucifera HOM05D005573 ORTHO05D007161 3.7e-98 361.7 202 91.1
DCAR_032486 Daucus carota HOM05D005573 ORTHO05D007161 1.6e-96 356.3 202 90.1
SalBow1G4134 Salvia bowleyana HOM05D005573 ORTHO05D007161 1.6e-96 356.3 202 90.1
PSO548G0019 Papaver somniferum HOM05D005573 ORTHO05D007161 3.5e-96 355.1 202 90.6
Sed0002328 Sechium edule HOM05D005573 ORTHO05D007161 5.9e-96 354.4 202 90.1
Sed0008322 Sechium edule HOM05D005573 ORTHO05D007161 5.9e-96 354.4 202 90.1
Medtr4g051220 Medicago truncatula HOM05D005573 ORTHO05D007161 2.2e-95 352.4 202 89.6
LjContig00318g0014176 Lotus japonicus HOM05D005573 ORTHO05D007161 8.5e-95 350.5 202 88.6
EL10As27g24246 Beta vulgaris HOM05D000216 ORTHO05D007161 3.2e-94 348.6 202 88.6
Gohir.A08G157500 Gossypium hirsutum HOM05D005573 ORTHO05D007161 7.2e-94 347.4 202 88.6
CARHR282030 Cardamine hirsuta HOM05D005573 ORTHO05D007161 4.7e-93 344.7 202 88.6
A06p23260 Brassica napus HOM05D005573 ORTHO05D007161 6.1e-93 344.4 202 88.6
BNapus_Darmor_BZH_scaffold_287p00070 Brassica napus HOM05D005573 ORTHO05D007161 6.1e-93 344.4 202 88.6
BolSC45t60866H Brassica oleracea HOM05D005573 ORTHO05D007161 6.1e-93 344.4 202 88.6
BolSC45t60946H Brassica oleracea HOM05D005573 ORTHO05D007161 6.1e-93 344.4 202 88.6
BolSC46t60993H Brassica oleracea HOM05D005573 ORTHO05D007161 6.1e-93 344.4 202 88.6
BolSC46t61042H Brassica oleracea HOM05D005573 ORTHO05D007161 6.1e-93 344.4 202 88.6
BraA06t25428Z Brassica rapa HOM05D005573 ORTHO05D007161 6.1e-93 344.4 202 88.6
BraSC140t45578Z Brassica rapa HOM05D005573 ORTHO05D007161 6.1e-93 344.4 202 88.6
BraSC151t45711Z Brassica rapa HOM05D005573 ORTHO05D007161 6.1e-93 344.4 202 88.6
AL2G20730 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 5.2e-92 341.3 202 88.1
ATCG00380 Arabidopsis thaliana HOM05D005573 ORTHO05D007161 2.0e-91 339.3 202 87.6
AL2G21420 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 2.6e-91 339.0 202 87.6
Lj2P1237T91 Lonicera japonica HOM05D005573 ORTHO05D007161 5.3e-89 331.3 204 87.3
Lj2P1239T179 Lonicera japonica HOM05D005573 ORTHO05D007161 5.3e-89 331.3 204 87.3
BolSC49t61189H Brassica oleracea HOM05D005573 ORTHO05D007161 2.7e-88 328.9 204 86.3
Lj4g0013543 Lotus japonicus HOM05D005573 ORTHO05D007161 6.5e-87 324.3 202 84.2
PGSC0003DMG400024039 Solanum tuberosum HOM05D005573 ORTHO05D007161 1.1e-86 323.6 182 92.9
Oeu012806.1 Olea europaea HOM05D005573 ORTHO05D007161 3.6e-85 318.5 199 82.4
Gohir.D04G083800 Gossypium hirsutum HOM05D005573 ORTHO05D007161 3.4e-83 312.0 202 81.7
EL10As12g24021 Beta vulgaris HOM05D005573 ORTHO05D007161 2.2e-82 309.3 200 79.5
Zm00001eb039080 Zea mays HOM05D005573 ORTHO05D007161 5.4e-81 304.7 202 77.2
Zm00001eb039210 Zea mays HOM05D005573 ORTHO05D007161 5.4e-81 304.7 202 77.2
Zm00001eb435020 Zea mays HOM05D005573 ORTHO05D007161 5.4e-81 304.7 202 77.2
Zm00001eb435220 Zea mays HOM05D005573 ORTHO05D007161 5.4e-81 304.7 202 77.2
Zm00001eb435420 Zea mays HOM05D005573 ORTHO05D007161 5.4e-81 304.7 202 77.2
Zm00001eb435680 Zea mays HOM05D005573 ORTHO05D007161 5.4e-81 304.7 202 77.2
Zm00001eb440990 Zea mays HOM05D005573 ORTHO05D007161 5.4e-81 304.7 202 77.2
Glyma.01G153400 Glycine max HOM05D005573 ORTHO05D007161 2.0e-80 302.8 185 82.2
Gohir.D09G179300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 2.6e-75 285.8 182 83.0
Gorai.006G201300 Gossypium raimondii HOM05D005573 ORTHO05D007161 4.4e-75 285.0 182 82.4
Medtr0002s0590 Medicago truncatula HOM05D005573 ORTHO05D007161 7.3e-70 267.7 182 74.7
C09p29560 Brassica napus HOM05D005573 ORTHO05D007161 3.6e-69 265.4 155 89.0
Thhalv10010766m.g Eutrema salsugineum HOM05D005573 ORTHO05D007161 5.2e-68 261.5 202 72.3
Solyc09g015330.2 Solanum lycopersicum HOM05D005573 ORTHO05D007161 1.3e-66 256.9 156 87.2
Nitab4.5_0006596g0030 Nicotiana tabacum HOM05D005573 ORTHO05D007161 1.1e-65 253.8 148 90.5
SEGI_18745 Sequoiadendron giganteum HOM05D005573 ORTHO05D007161 2.4e-65 252.7 208 66.3
Zm00001eb039100 Zea mays HOM05D005573 ORTHO05D007161 2.4e-65 252.7 172 75.6
Lalb_Chr07g0191491 Lupinus albus HOM05D005573 ORTHO05D007161 6.0e-64 248.1 151 85.4
Zm00001eb231240 Zea mays HOM05D005573 ORTHO05D007161 3.9e-63 245.4 177 72.3
TWI60G0396 Tripterygium wilfordii HOM05D005573 ORTHO05D007161 3.3e-62 242.3 138 88.4
Gohir.A09G103300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 2.3e-60 236.1 148 84.5
GSVIVG01021975001 Vitis vinifera HOM05D005573 ORTHO05D007161 1.2e-56 223.8 132 87.9
Nn2g13212 Nelumbo nucifera HOM05D005573 ORTHO05D007161 4.7e-53 211.8 114 92.1
Nn423s46610 Nelumbo nucifera HOM05D005573 ORTHO05D007161 4.7e-53 211.8 114 92.1
HanXRQChr13g0413641 Helianthus annuus HOM05D005573 ORTHO05D007161 6.2e-53 211.5 114 92.1
HanXRQChr13g0413711 Helianthus annuus HOM05D005573 ORTHO05D007161 6.2e-53 211.5 114 92.1
HanXRQChr13g0413781 Helianthus annuus HOM05D005573 ORTHO05D007161 6.2e-53 211.5 114 92.1
HanXRQChr13g0413861 Helianthus annuus HOM05D005573 ORTHO05D007161 6.2e-53 211.5 114 92.1
HanXRQChr13g0413931 Helianthus annuus HOM05D005573 ORTHO05D007161 6.2e-53 211.5 114 92.1
arahy.Tifrunner.gnm1.ann1.NT5R3P Arachis hypogaea HOM05D005573 ORTHO05D007161 1.4e-52 210.3 157 73.9
CAN.G1478.12 Capsicum annuum HOM05D005573 ORTHO05D007161 2.3e-52 209.5 103 100.0
Nn6g33243 Nelumbo nucifera HOM05D005573 ORTHO05D007161 2.0e-51 206.5 114 89.5
Eucgr.B02956 Eucalyptus grandis HOM05D005573 ORTHO05D007161 2.6e-51 206.1 114 86.8
CDE08G0454 Ceratophyllum demersum HOM05D000219 ORTHO05D000226 3.7e-50 202.2 114 88.6
CAN.G129.6 Capsicum annuum HOM05D005573 ORTHO05D007161 3.2e-49 199.1 103 94.2
CAN.G100.47 Capsicum annuum HOM05D005573 ORTHO05D007161 1.7e-47 193.4 103 92.2
Gohir.A10G100366 Gossypium hirsutum HOM05D005573 ORTHO05D007161 1.7e-47 193.4 114 84.2
Oeu062838.1 Olea europaea HOM05D005573 ORTHO05D007161 3.9e-47 192.2 129 80.6
Solyc09g015310.3 Solanum lycopersicum HOM05D005573 ORTHO05D007161 3.3e-46 189.1 102 89.2
Potri.013G163300 Populus trichocarpa HOM05D005573 ORTHO05D007161 4.3e-46 188.7 103 89.3
Gohir.A07G163636 Gossypium hirsutum HOM05D005573 ORTHO05D007161 1.2e-45 187.2 114 82.5
ClCG00G003940 Citrullus lanatus HOM05D005573 ORTHO05D007161 6.2e-45 184.9 101 95.0
Lalb_Chr15g0080691 Lupinus albus HOM05D005573 ORTHO05D007161 1.2e-43 180.6 103 84.5
Zm00001eb438350 Zea mays HOM05D005573 ORTHO05D007161 2.2e-42 176.4 114 76.3
Nn5g30925 Nelumbo nucifera HOM05D005573 ORTHO05D007161 4.6e-40 168.7 90 91.1
BraSC25t45875Z Brassica rapa HOM05D005573 ORTHO05D007161 6.0e-40 168.3 103 82.5
Phvul.008G150500 Phaseolus vulgaris HOM05D005573 ORTHO05D007161 2.3e-39 166.4 94 81.9
Phvul.011G056580 Phaseolus vulgaris HOM05D005573 ORTHO05D007161 2.3e-39 166.4 101 85.1
Migut.D01353 Erythranthe guttata HOM05D005573 ORTHO05D007161 1.1e-36 157.5 142 62.7
SMO086G0035 Selaginella moellendorffii HOM05D005573 ORTHO05D007161 1.3e-34 150.6 190 48.9
SMO086G0038 Selaginella moellendorffii HOM05D005573 ORTHO05D007161 1.3e-34 150.6 190 48.9
CAN.G63.13 Capsicum annuum HOM05D005573 ORTHO05D007161 1.9e-33 146.7 77 92.2
arahy.Tifrunner.gnm1.ann1.NAZW4C Arachis hypogaea HOM05D005573 ORTHO05D007161 9.3e-33 144.4 104 73.1
BolC9t56936H Brassica oleracea HOM05D005573 ORTHO05D007161 2.3e-31 139.8 77 92.2
CAN.G653.3 Capsicum annuum HOM05D005573 ORTHO05D007161 2.8e-29 132.9 65 100.0
TAR625G0941 Trochodendron aralioides HOM05D005573 ORTHO05D007161 8.1e-29 131.3 75 84.0
Zm00001eb434930 Zea mays HOM05D005573 ORTHO05D007161 1.4e-28 130.6 89 71.9
Gohir.A09G045300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 3.1e-28 129.4 73 90.4
SEGI_40009 Sequoiadendron giganteum HOM05D005573 ORTHO05D007161 4.0e-28 129.0 108 66.7
Oeu056456.1 Olea europaea HOM05D005573 ORTHO05D007161 2.0e-27 126.7 66 90.9
Gohir.A09G045446 Gossypium hirsutum HOM05D005573 ORTHO05D007161 1.7e-26 123.6 74 83.8
HanXRQChr00c0345g0573881 Helianthus annuus HOM05D005573 ORTHO05D007161 8.4e-26 121.3 67 89.6
CiPaw.12G056900 Carya illinoinensis HOM05D005573 ORTHO05D007161 1.1e-25 120.9 86 72.1
BolSC47t61119H Brassica oleracea HOM05D005573 ORTHO05D007161 2.4e-25 119.8 64 93.8
Sc09g0006540 Simmondsia chinensis HOM05D005573 ORTHO05D005696 3.5e-24 115.9 79 78.5
CAN.G331.1 Capsicum annuum HOM05D005573 ORTHO05D007161 3.0e-23 112.8 64 84.4
Solyc11g022610.1 Solanum lycopersicum HOM05D005573 ORTHO05D007161 3.0e-23 112.8 76 84.2
BolSC29t60458H Brassica oleracea HOM05D005573 ORTHO05D007161 1.5e-22 110.5 67 82.1
BolSC47t61104H Brassica oleracea HOM05D005573 ORTHO05D007161 1.5e-22 110.5 67 82.1
Mapoly0090s0058 Marchantia polymorpha HOM05D005573 ORTHO05D007161 1.4e-20 104.0 66 74.2
Nn071s42388 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.4e-20 104.0 90 73.3
TAR375G0006 Trochodendron aralioides HOM05D005573 ORTHO05D007161 2.4e-20 103.2 61 83.6
Oeu052069.1 Olea europaea HOM05D005573 ORTHO05D007161 3.4e-19 99.4 109 56.0
BolC7t41664H Brassica oleracea HOM05D005573 ORTHO05D007161 4.5e-19 99.0 61 78.7
Solyc11g022620.1 Solanum lycopersicum HOM05D005573 ORTHO05D007161 5.5e-17 92.0 55 78.2
MELO3C027485.2 Cucumis melo HOM05D005573 ORTHO05D007161 9.3e-17 91.3 50 88.0
Nn055s41940 Nelumbo nucifera HOM05D005573 ORTHO05D007161 2.1e-16 90.1 45 93.3
MELO3C022836.2 Cucumis melo HOM05D005573 ORTHO05D007161 3.5e-16 89.4 49 87.8
Oeu042745.1 Olea europaea HOM05D005573 ORTHO05D007161 4.6e-16 89.0 104 53.8
Nitab4.5_0000261g0250 Nicotiana tabacum HOM05D005573 ORTHO05D007161 7.9e-16 88.2 42 95.2
HanXRQChr13g0413681 Helianthus annuus HOM05D005573 ORTHO05D029920 3.9e-15 85.9 45 88.9
HanXRQChr13g0413751 Helianthus annuus HOM05D005573 ORTHO05D029920 3.9e-15 85.9 45 88.9
HanXRQChr13g0413831 Helianthus annuus HOM05D005573 ORTHO05D029920 3.9e-15 85.9 45 88.9
HanXRQChr13g0413901 Helianthus annuus HOM05D005573 ORTHO05D029920 3.9e-15 85.9 45 88.9
Nn021s41552 Nelumbo nucifera HOM05D005573 ORTHO05D007161 2.5e-14 83.2 41 97.6
BraSC25t45840Z Brassica rapa HOM05D005573 ORTHO05D007161 9.6e-14 81.3 52 84.6
Oeu041772.1 Olea europaea HOM05D005573 ORTHO05D007161 2.4e-12 76.6 58 72.4
Nn055s41939 Nelumbo nucifera HOM05D005573 ORTHO05D007161 3.1e-12 76.3 37 97.3
ClCG11G007200 Citrullus lanatus HOM05D005573 ORTHO05D007161 4.1e-12 75.9 52 69.2
BolSC29t60581H Brassica oleracea HOM05D005573 ORTHO05D007161 2.5e-09 66.6 36 94.4
BolC9t55817H Brassica oleracea HOM05D005573 ORTHO05D007161 1.2e-08 64.3 48 72.9
Glyma.18G203700 Glycine max HOM05D005573 ORTHO05D007161 1.0e-07 61.2 40 75.0


User provided reference genes

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