Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G637.8 Capsicum annuum HOM05D006175 ORTHO05D008081 1.2e-305 1052.4 520 100.0
Sopen03g028960 Solanum pennellii HOM05D006175 ORTHO05D008081 9.9e-289 996.1 526 93.5
Solyc03g098250.4 Solanum lycopersicum HOM05D006175 ORTHO05D008081 2.5e-287 991.5 531 92.8
PGSC0003DMG400031043 Solanum tuberosum HOM05D006175 ORTHO05D008081 9.3e-287 989.6 531 92.8
Peaxi162Scf00171g00431 Petunia axillaris HOM05D006175 ORTHO05D008081 8.8e-269 929.9 531 87.8
Cc04_g09090 Coffea canephora HOM05D006175 ORTHO05D008081 2.2e-251 872.1 528 80.1
Nitab4.5_0005973g0040 Nicotiana tabacum HOM05D006175 ORTHO05D008081 1.9e-247 859.0 551 80.8
Oeu019145.1 Olea europaea HOM05D006175 ORTHO05D008081 2.0e-244 849.0 542 76.9
Migut.O00238 Erythranthe guttata HOM05D006175 ORTHO05D008081 2.9e-240 835.1 536 76.3
GSVIVG01008158001 Vitis vinifera HOM05D006175 ORTHO05D008081 1.2e-238 829.7 531 75.9
Eucgr.H00594 Eucalyptus grandis HOM05D006175 ORTHO05D008081 4.4e-236 821.2 531 74.8
Atru.chr3.1303 Acer truncatum HOM05D006175 ORTHO05D008081 1.4e-234 816.2 531 74.4
DCAR_023267 Daucus carota HOM05D006175 ORTHO05D008081 2.4e-234 815.5 572 71.5
CiPaw.15G150200 Carya illinoinensis HOM05D006175 ORTHO05D008081 7.0e-234 813.9 529 75.2
Cfa020669 Carpinus fangiana HOM05D006175 ORTHO05D008081 3.8e-232 808.1 530 75.3
Ciclev10019690m.g Citrus clementina HOM05D006175 ORTHO05D008081 6.1e-230 800.8 532 73.3
SalBow5G1258 Salvia bowleyana HOM05D006175 ORTHO05D008081 1.7e-227 792.7 541 71.7
arahy.Tifrunner.gnm1.ann1.R57YID Arachis hypogaea HOM05D006175 ORTHO05D008081 2.2e-227 792.3 536 72.6
Gorai.009G004100 Gossypium raimondii HOM05D006175 ORTHO05D008081 1.1e-226 790.0 535 71.6
QL10p033089 Quercus lobata HOM05D006175 ORTHO05D008081 4.1e-226 788.1 563 70.3
TWI60G0630 Tripterygium wilfordii HOM05D006175 ORTHO05D008081 9.2e-226 786.9 531 73.8
Gohir.D05G004300 Gossypium hirsutum HOM05D006175 ORTHO05D008081 1.2e-225 786.6 531 72.3
SGA_v2.0_scaffold90G27775 Striga asiatica HOM05D006175 ORTHO05D008081 4.5e-225 784.6 525 73.3
Potri.012G039300 Populus trichocarpa HOM05D006175 ORTHO05D008081 1.0e-224 783.5 538 71.2
arahy.Tifrunner.gnm1.ann1.SV5NHS Arachis hypogaea HOM05D006175 ORTHO05D008081 1.3e-224 783.1 545 71.2
CANSAT01G2997 Cannabis sativa HOM05D006175 ORTHO05D008081 1.3e-224 783.1 533 70.5
ClCG04G012690 Citrullus lanatus HOM05D006175 ORTHO05D008081 2.3e-224 782.3 532 71.6
Gohir.A05G003900 Gossypium hirsutum HOM05D006175 ORTHO05D008081 2.9e-224 781.9 531 71.8
Thecc.03G068300 Theobroma cacao HOM05D006175 ORTHO05D008081 2.9e-224 781.9 525 72.6
MELO3C001937.2 Cucumis melo HOM05D006175 ORTHO05D008081 3.9e-224 781.6 528 72.2
Duzib168G0906 Durio zibethinus HOM05D006175 ORTHO05D008081 1.9e-223 779.2 560 69.1
Nitab4.5_0001180g0190 Nicotiana tabacum HOM05D006175 ORTHO05D008081 1.9e-223 779.2 534 76.4
Lj2g0014656 Lotus japonicus HOM05D006175 ORTHO05D008081 4.3e-223 778.1 537 70.8
Sed0010232 Sechium edule HOM05D006175 ORTHO05D008081 1.6e-222 776.2 527 72.3
Dinv02367 Davidia involucrata HOM05D006175 ORTHO05D008081 8.0e-222 773.9 523 74.2
PGR083G2599 Punica granatum HOM05D006175 ORTHO05D008081 8.0e-222 773.9 532 71.4
CsaV3_1G032270 Cucumis sativus L. HOM05D006175 ORTHO05D008081 9.8e-220 766.9 528 71.6
VMungo0464G1920 Vigna mungo HOM05D006175 ORTHO05D008081 1.2e-217 760.0 538 69.1
FvH4_5g17980 Fragaria vesca HOM05D006175 ORTHO05D008081 1.6e-217 759.6 525 71.0
Glyma.16G218700 Glycine max HOM05D006175 ORTHO05D008081 2.0e-217 759.2 530 70.0
RcHm_v2.0_Chr7g0177621 Rosa chinensis HOM05D006175 ORTHO05D008081 4.6e-217 758.1 541 69.9
Lsat_1_v5_gn_2_15241 Lactuca sativa HOM05D006175 ORTHO05D008081 1.0e-216 756.9 526 70.9
Phvul.004G144700 Phaseolus vulgaris HOM05D006175 ORTHO05D008081 1.1e-215 753.4 533 70.0
Zm00001eb037700 Zea mays HOM05D006175 ORTHO05D008081 4.3e-215 751.5 529 68.2
TAR622G0246 Trochodendron aralioides HOM05D006175 ORTHO05D008081 7.5e-212 740.7 485 75.9
Sabra12G0027800 Salix brachista HOM05D006175 ORTHO05D008081 2.2e-211 739.2 539 68.6
ECA238G0751 Erigeron canadensis HOM05D006175 ORTHO05D008081 6.4e-211 737.6 526 68.6
PSO782G5703 Papaver somniferum HOM05D006175 ORTHO05D008081 2.4e-210 735.7 529 68.6
CSS0011699 Camellia sinensis var. sinensis HOM05D006175 ORTHO05D008081 7.1e-210 734.2 551 68.1
PSO063G7422 Papaver somniferum HOM05D006175 ORTHO05D008081 1.2e-209 733.4 529 68.2
SHI32102 Sapria himalayana HOM05D006175 ORTHO05D008081 3.9e-208 728.4 565 65.0
THA.LOC104810934 Tarenaya hassleriana HOM05D006175 ORTHO05D008081 5.1e-208 728.0 531 67.0
Aqoxy2G03817 Aquilegia oxysepala HOM05D006175 ORTHO05D008081 1.9e-207 726.1 528 68.4
Lj5A165T85 Lonicera japonica HOM05D006175 ORTHO05D008081 3.3e-207 725.3 479 73.7
Os05g0160800 Oryza sativa ssp. japonica HOM05D006175 ORTHO05D008081 2.3e-205 719.2 504 68.7
Prupe.8G055400 Prunus persica HOM05D006175 ORTHO05D008081 4.0e-205 718.4 535 67.1
Aa31LG1G13320 Aethionema arabicum HOM05D006175 ORTHO05D008081 6.8e-205 717.6 521 67.6
Cpa.g.sc103.12 Carica papaya HOM05D006175 ORTHO05D008081 1.5e-204 716.5 519 67.8
Thhalv10001961m.g Eutrema salsugineum HOM05D006175 ORTHO05D008081 2.6e-204 715.7 527 66.4
EL10Ac3g05085 Beta vulgaris HOM05D006175 ORTHO05D008081 4.9e-203 711.4 526 65.4
BcaC01g04929 Brassica carinata HOM05D006175 ORTHO05D008081 1.9e-202 709.5 526 66.3
SpUn0288_0010 Schrenkiella parvula HOM05D006175 ORTHO05D008081 1.9e-202 709.5 527 66.0
BolC3t15542H Brassica oleracea HOM05D006175 ORTHO05D008081 3.2e-202 708.8 526 66.3
Carub.0006s1975 Capsella rubella HOM05D006175 ORTHO05D008081 3.2e-202 708.8 526 67.1
Sc10g0008900 Simmondsia chinensis HOM05D006175 ORTHO05D008081 3.2e-202 708.8 531 67.0
BraA03t11882Z Brassica rapa HOM05D006175 ORTHO05D008081 4.1e-202 708.4 526 66.0
C03p31990 Brassica napus HOM05D006175 ORTHO05D008081 9.2e-202 707.2 526 66.2
Medtr6g075170 Medicago truncatula HOM05D006175 ORTHO05D008081 2.1e-201 706.1 533 65.7
AL6G33090 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 4.6e-201 704.9 526 66.9
AT5G22110 Arabidopsis thaliana HOM05D006175 ORTHO05D008081 7.8e-201 704.1 526 66.5
SEGI_25528 Sequoiadendron giganteum HOM05D006175 ORTHO05D008081 1.3e-200 703.4 530 64.3
TPR.G28014 Trifolium pratense HOM05D006175 ORTHO05D008081 3.0e-200 702.2 556 63.1
BcaB01g03058 Brassica carinata HOM05D006175 ORTHO05D008081 5.1e-200 701.4 522 66.3
A03p26700 Brassica napus HOM05D006175 ORTHO05D008081 8.6e-200 700.7 527 65.7
Manes.03G098800 Manihot esculenta HOM05D006175 ORTHO05D008081 1.4e-197 693.3 490 69.8
MD06G1235400 Malus domestica HOM05D006175 ORTHO05D008081 5.4e-194 681.4 529 64.8
vmacro03513 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 5.1e-192 674.9 606 59.7
COL.COLO4_27108 Corchorus olitorius HOM05D006175 ORTHO05D008081 5.8e-180 634.8 506 62.6
Hund09784 Selenicereus undatus HOM05D006175 ORTHO05D008081 1.1e-175 620.5 526 60.3
Ah.04g156800 Amaranthus hybridus HOM05D006175 ORTHO05D008081 1.9e-175 619.8 526 57.6
Haze_18963 Corylus avellana HOM05D006175 ORTHO05D008081 1.9e-175 619.8 524 61.6
AUR62002056 Chenopodium quinoa HOM05D006175 ORTHO05D008081 1.2e-169 600.5 584 54.6
Pp3c16_3220 Physcomitrium patens HOM05D006175 ORTHO05D008081 6.9e-165 584.7 526 54.0
ATR0598G269 Amborella trichopoda HOM05D006175 ORTHO05D008081 3.4e-164 582.4 528 57.0
vmacro01251 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 1.3e-163 580.5 633 52.8
SMO089G0008 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 9.3e-162 574.3 531 53.9
AUR62028170 Chenopodium quinoa HOM05D006175 ORTHO05D008081 1.8e-160 570.1 526 55.9
Mapoly0003s0120 Marchantia polymorpha HOM05D006175 ORTHO05D008081 2.8e-158 562.8 525 53.3
HPP92_019162 Vanilla planifolia HOM05D006175 ORTHO05D008081 2.0e-156 556.6 524 55.0
Prupe.5G240100 Prunus persica HOM05D006175 ORTHO05D008081 1.1e-154 550.8 553 55.0
SMO200G0091 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 2.9e-147 526.2 532 51.1
HanXRQChr05g0129731 Helianthus annuus HOM05D006175 ORTHO05D008081 9.1e-141 504.6 317 74.4
Lalb_Chr22g0353691 Lupinus albus HOM05D006175 ORTHO05D008081 3.8e-139 499.2 302 76.2
AagrBONN_evm.TU.Sc2ySwM_369.495 Anthoceros agrestis HOM05D006175 ORTHO05D008081 1.8e-136 490.3 519 48.2
HanXRQChr11g0338981 Helianthus annuus HOM05D006175 ORTHO05D008081 3.2e-130 469.5 302 73.5
Psat6g072600 Pisum sativum HOM05D006175 ORTHO05D008081 1.2e-124 451.1 553 46.3
Rhsim06G0000100 Rhododendron simsii HOM05D006175 ORTHO05D008081 1.6e-124 450.7 301 69.4
unitig_0.g1094 Utricularia gibba HOM05D006175 ORTHO05D008081 8.5e-123 444.9 554 46.9
MD14G1242400 Malus domestica HOM05D006175 ORTHO05D008081 7.0e-117 425.2 442 52.5
FAN18G1603 Fragaria x ananassa HOM05D006175 ORTHO05D008081 2.9e-110 403.3 244 77.5
Glyma.09G169100 Glycine max HOM05D006175 ORTHO05D008081 5.0e-99 365.9 301 62.1
MCO14G014 Micromonas commoda HOM05D006175 ORTHO05D008081 2.3e-91 340.5 644 32.3
AL4G26880 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 1.4e-85 321.2 361 48.2
Cre10.g424200 Chlamydomonas reinhardtii HOM05D006175 ORTHO05D008081 2.1e-76 290.8 579 33.3
Lalb_Chr22g0353701 Lupinus albus HOM05D006175 ORTHO05D008081 3.2e-69 266.9 222 60.8
HanXRQChr05g0129721 Helianthus annuus HOM05D006175 ORTHO05D008081 1.1e-66 258.5 209 64.6
PRCOL_00003367 Prasinoderma coloniale HOM05D006175 ORTHO05D008081 4.3e-66 256.5 574 33.8
HanXRQChr11g0338971 Helianthus annuus HOM05D006175 ORTHO05D008081 2.8e-65 253.8 209 63.6
FAN04G2119 Fragaria x ananassa HOM05D006175 ORTHO05D008081 3.7e-57 226.9 205 56.6
FAN08G2730 Fragaria x ananassa HOM05D006175 ORTHO05D008081 1.4e-56 224.9 205 56.1
FAN13G0892 Fragaria x ananassa HOM05D006175 ORTHO05D008081 4.0e-56 223.4 205 55.6
AUR62043421 Chenopodium quinoa HOM05D006175 ORTHO05D008081 1.6e-49 201.4 171 59.1
CDE04G1443 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 2.1e-49 201.1 104 86.5
VMungo1215G0683 Vigna mungo HOM05D006175 ORTHO05D008081 1.1e-48 198.7 108 82.4
Ca_23674_v3 Cicer arietinum L. HOM05D006175 ORTHO05D008081 1.4e-35 155.2 179 45.8
Thecc.10G092900 Theobroma cacao HOM05D006175 ORTHO05D008952 3.4e-31 140.6 131 56.5
CDE04G2185 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 3.2e-29 134.0 85 70.6
CDE04G3312 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 1.6e-28 131.7 315 29.5
CDE04G3394 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 4.1e-16 90.5 110 52.7
Thecc.04G242900 Theobroma cacao HOM05D006175 ORTHO05D008081 4.5e-15 87.0 48 79.2
CSS0024377 Camellia sinensis var. sinensis HOM05D006175 ORTHO05D043346 2.3e-11 74.7 42 81.0
CAN.G93.25 Capsicum annuum HOM05D000544 ORTHO05D000137 8.8e-11 72.8 41 82.9
BcaC05g28616 Brassica carinata HOM05D002760 ORTHO05D001361 2.8e-09 67.8 33 84.8
A07p06810 Brassica napus HOM05D002760 ORTHO05D003169 2.8e-09 67.8 33 84.8
BNapus_Darmor_BZH_scaffold_38p01460 Brassica napus HOM05D002760 ORTHO05D003169 2.8e-09 67.8 33 84.8
BraA03t12607Z Brassica rapa HOM05D002760 ORTHO05D003169 2.8e-09 67.8 33 84.8
C05p47240 Brassica napus HOM05D002760 ORTHO05D003169 8.3e-09 66.2 33 81.8
Gohir.D04G101160 Gossypium hirsutum HOM05D006175 ORTHO05D047312 1.2e-07 62.4 60 53.3
Gorai.009G404500 Gossypium raimondii HOM05D006175 ORTHO05D047312 1.2e-07 62.4 60 51.7
Actinidia31560 Actinidia chinensis HOM05D006175 ORTHO05D008081 2.0e-07 61.6 60 60.0
TPR.G28017 Trifolium pratense HOM05D006175 ORTHO05D008081 3.5e-07 60.8 113 37.2
Cfa025039 Carpinus fangiana HOM05D006175 ORTHO05D008081 3.8e-06 57.4 305 23.3


User provided reference genes

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