Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G637.23 Capsicum annuum HOM05D004257 ORTHO05D005202 5.1e-193 677.6 341 100.0
Sopen03g028840 Solanum pennellii HOM05D004257 ORTHO05D005202 4.4e-184 647.9 344 95.9
PGSC0003DMG402031052 Solanum tuberosum HOM05D004257 ORTHO05D005202 7.4e-184 647.1 343 95.9
Solyc03g098140.3 Solanum lycopersicum HOM05D004257 ORTHO05D005202 4.8e-183 644.4 344 95.3
Nitab4.5_0004454g0010 Nicotiana tabacum HOM05D004257 ORTHO05D005202 1.8e-182 642.5 344 94.2
Peaxi162Scf00171g00722 Petunia axillaris HOM05D004257 ORTHO05D005202 5.3e-182 641.0 341 95.0
Nitab4.5_0000936g0060 Nicotiana tabacum HOM05D004257 ORTHO05D005202 7.0e-174 614.0 330 93.6
Dinv06012 Davidia involucrata HOM05D004257 ORTHO05D005202 3.2e-163 578.6 342 85.4
Hma1.2p1_0075F.1_g039210 Hydrangea macrophylla HOM05D004257 ORTHO05D005202 1.2e-162 576.6 342 85.4
CSS0006901 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 2.7e-162 575.5 342 83.6
CSS0016221 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 2.7e-162 575.5 342 83.6
Aqoxy2G03662 Aquilegia oxysepala HOM05D004257 ORTHO05D005202 4.7e-162 574.7 341 84.2
TAR365G0817 Trochodendron aralioides HOM05D004257 ORTHO05D005202 8.0e-162 573.9 344 85.2
Lj5A229T68 Lonicera japonica HOM05D004257 ORTHO05D005202 2.3e-161 572.4 342 84.2
Cc04_g09710 Coffea canephora HOM05D004257 ORTHO05D005202 2.0e-160 569.3 347 81.3
SGA_v2.0_scaffold90G27780 Striga asiatica HOM05D004257 ORTHO05D005202 9.8e-160 567.0 345 82.3
MSTRG.23192 Avicennia marina HOM05D004257 ORTHO05D005202 1.7e-159 566.2 323 87.6
Nn3g19680 Nelumbo nucifera HOM05D004257 ORTHO05D005202 1.7e-159 566.2 343 83.4
DCAR_010071 Daucus carota HOM05D004257 ORTHO05D005202 4.9e-159 564.7 341 83.3
Potri.005G225700 Populus trichocarpa HOM05D004257 ORTHO05D005202 1.1e-158 563.5 343 82.8
Migut.O00233 Erythranthe guttata HOM05D004257 ORTHO05D005202 3.1e-158 562.0 326 85.0
Actinidia38939 Actinidia chinensis HOM05D004257 ORTHO05D005202 1.2e-157 560.1 341 82.4
Potri.002G037400 Populus trichocarpa HOM05D004257 ORTHO05D005202 1.6e-157 559.7 343 82.8
COL.COLO4_04031 Corchorus olitorius HOM05D004257 ORTHO05D005202 2.7e-157 558.9 347 82.4
Manes.12G033300 Manihot esculenta HOM05D004257 ORTHO05D005202 2.7e-157 558.9 334 82.6
Aqoxy5G00217 Aquilegia oxysepala HOM05D004257 ORTHO05D005202 5.9e-157 557.8 341 83.6
FAN24G1061 Fragaria x ananassa HOM05D004257 ORTHO05D005202 1.0e-156 557.0 345 81.2
Sabra02G0030200 Salix brachista HOM05D004257 ORTHO05D005202 1.3e-156 556.6 343 81.9
FAN20G1479 Fragaria x ananassa HOM05D004257 ORTHO05D005202 2.9e-156 555.4 346 80.9
FvH4_2g21300 Fragaria vesca HOM05D004257 ORTHO05D005202 3.8e-156 555.1 346 80.6
TAR362G0002 Trochodendron aralioides HOM05D004257 ORTHO05D005202 1.1e-155 553.5 344 82.6
MSTRG.11529 Avicennia marina HOM05D004257 ORTHO05D005202 1.9e-155 552.7 338 82.0
Duzib133G1463 Durio zibethinus HOM05D004257 ORTHO05D005202 2.5e-155 552.4 346 80.3
RcHm_v2.0_Chr6g0287891 Rosa chinensis HOM05D004257 ORTHO05D005202 3.3e-155 552.0 353 79.9
ClCG07G001120 Citrullus lanatus HOM05D004257 ORTHO05D005202 5.6e-155 551.2 355 78.6
Thecc.01G256600 Theobroma cacao HOM05D004257 ORTHO05D005202 5.6e-155 551.2 345 79.7
FAN27G2888 Fragaria x ananassa HOM05D004257 ORTHO05D005202 7.3e-155 550.8 346 80.3
vmacro10363 Vaccinium macrocarpon HOM05D004257 ORTHO05D005202 2.8e-154 548.9 351 79.2
Ciclev10021043m.g Citrus clementina HOM05D004257 ORTHO05D005202 3.6e-154 548.5 341 80.6
Gorai.001G178500 Gossypium raimondii HOM05D004257 ORTHO05D005202 8.0e-154 547.4 346 79.5
DCAR_014267 Daucus carota HOM05D004257 ORTHO05D005202 1.0e-153 547.0 342 81.0
CsaV3_3G022160 Cucumis sativus L. HOM05D004257 ORTHO05D005202 1.8e-153 546.2 349 79.9
Gohir.D07G155600 Gossypium hirsutum HOM05D004257 ORTHO05D005202 2.3e-153 545.8 346 79.2
AUR62040921 Chenopodium quinoa HOM05D004257 ORTHO05D005202 3.0e-153 545.4 339 79.9
PSO832G0932 Papaver somniferum HOM05D004257 ORTHO05D005202 6.8e-153 544.3 348 78.7
AUR62004833 Chenopodium quinoa HOM05D004257 ORTHO05D005202 8.9e-153 543.9 339 79.9
FAN15G2746 Fragaria x ananassa HOM05D004257 ORTHO05D005202 8.9e-153 543.9 348 79.0
Hund06906 Selenicereus undatus HOM05D004257 ORTHO05D005202 8.9e-153 543.9 342 79.8
Duzib138G0002 Durio zibethinus HOM05D004257 ORTHO05D005202 1.2e-152 543.5 346 79.2
Cfa002439 Carpinus fangiana HOM05D004257 ORTHO05D005202 1.5e-152 543.1 343 79.6
PSO210G0560 Papaver somniferum HOM05D004257 ORTHO05D005202 1.5e-152 543.1 348 78.4
BcaC02g09050 Brassica carinata HOM05D004257 ORTHO05D005202 2.0e-152 542.7 341 77.4
C04p37820 Brassica napus HOM05D004257 ORTHO05D005202 2.0e-152 542.7 341 77.4
BolC4t25358H Brassica oleracea HOM05D004257 ORTHO05D005202 2.0e-152 542.7 341 77.4
Gohir.A07G149400 Gossypium hirsutum HOM05D004257 ORTHO05D005202 2.6e-152 542.3 346 78.6
Atru.chr5.1712 Acer truncatum HOM05D004257 ORTHO05D005202 3.4e-152 542.0 341 80.4
Ah.04g163130 Amaranthus hybridus HOM05D004257 ORTHO05D005202 3.4e-152 542.0 341 78.3
TWI18G0956 Tripterygium wilfordii HOM05D004257 ORTHO05D005202 3.4e-152 542.0 342 78.9
CANSAT01G0143 Cannabis sativa HOM05D004257 ORTHO05D005202 4.4e-152 541.6 345 78.3
MELO3C012874.2 Cucumis melo HOM05D004257 ORTHO05D005202 7.5e-152 540.8 327 82.6
QL09p039362 Quercus lobata HOM05D004257 ORTHO05D005202 7.5e-152 540.8 340 78.8
Sed0014699 Sechium edule HOM05D004257 ORTHO05D005202 9.8e-152 540.4 353 78.5
Gorai.007G147100 Gossypium raimondii HOM05D004257 ORTHO05D005202 3.7e-151 538.5 348 78.7
CANSAT35G1745 Cannabis sativa HOM05D004257 ORTHO05D005202 6.4e-151 537.7 351 77.2
Eucgr.K03257 Eucalyptus grandis HOM05D004257 ORTHO05D005202 8.3e-151 537.3 354 78.5
AL5G35770 Arabidopsis lyrata HOM05D004257 ORTHO05D005202 1.1e-150 537.0 352 76.1
Gohir.D11G137300 Gossypium hirsutum HOM05D004257 ORTHO05D005202 1.1e-150 537.0 348 78.4
Sed0007154 Sechium edule HOM05D004257 ORTHO05D005202 1.4e-150 536.6 345 78.3
THA.LOC104825258 Tarenaya hassleriana HOM05D004257 ORTHO05D005202 1.4e-150 536.6 343 78.1
AT3G54690 Arabidopsis thaliana HOM05D004257 ORTHO05D005202 2.4e-150 535.8 352 76.1
Gohir.A11G131450 Gossypium hirsutum HOM05D004257 ORTHO05D005202 2.4e-150 535.8 348 78.4
MBI07_g16916_MAGBIO Magnolia biondii HOM05D004257 ORTHO05D005202 2.4e-150 535.8 318 83.6
Lsat_1_v5_gn_3_39581 Lactuca sativa HOM05D004257 ORTHO05D005202 4.1e-150 535.0 341 79.2
TWI12G0832 Tripterygium wilfordii HOM05D004257 ORTHO05D005202 5.4e-150 534.6 343 78.1
A04p05160 Brassica napus HOM05D004257 ORTHO05D005202 7.0e-150 534.3 341 77.7
BraA04t16226Z Brassica rapa HOM05D004257 ORTHO05D005202 7.0e-150 534.3 341 77.7
CARHR164610 Cardamine hirsuta HOM05D004257 ORTHO05D005202 9.2e-150 533.9 354 75.1
Thhalv10010498m.g Eutrema salsugineum HOM05D004257 ORTHO05D005202 9.2e-150 533.9 353 75.4
CiPaw.03G265600 Carya illinoinensis HOM05D004257 ORTHO05D005202 2.0e-149 532.7 348 77.9
PGR044G0150 Punica granatum HOM05D004257 ORTHO05D005202 2.7e-149 532.3 348 78.2
BcaB02g07726 Brassica carinata HOM05D004257 ORTHO05D005202 4.6e-149 531.6 349 75.6
PSO675G8702 Papaver somniferum HOM05D004257 ORTHO05D005202 7.8e-149 530.8 348 75.9
Haze_24645 Corylus avellana HOM05D004257 ORTHO05D005202 1.0e-148 530.4 369 73.4
PSO675G6112 Papaver somniferum HOM05D004257 ORTHO05D005202 1.0e-148 530.4 348 75.9
PSO675G8755 Papaver somniferum HOM05D004257 ORTHO05D005202 1.7e-148 529.6 330 78.5
Sp5g07760 Schrenkiella parvula HOM05D004257 ORTHO05D005202 1.7e-148 529.6 354 74.6
BcaC08g44693 Brassica carinata HOM05D004257 ORTHO05D005202 2.3e-148 529.3 348 75.0
C06p22290 Brassica napus HOM05D004257 ORTHO05D005202 2.3e-148 529.3 348 75.0
BolC6t37415H Brassica oleracea HOM05D004257 ORTHO05D005202 6.6e-148 527.7 348 75.0
Carub.0005s2129 Capsella rubella HOM05D004257 ORTHO05D005202 8.6e-148 527.3 355 74.1
Sc09g0004250 Simmondsia chinensis HOM05D004257 ORTHO05D005202 8.6e-148 527.3 346 77.5
CiPaw.04G187400 Carya illinoinensis HOM05D004257 ORTHO05D005202 2.5e-147 525.8 341 76.5
Prupe.8G222200 Prunus persica HOM05D004257 ORTHO05D005202 5.6e-147 524.6 359 75.2
Ca_08681_v3 Cicer arietinum L. HOM05D004257 ORTHO05D005202 9.5e-147 523.9 343 78.1
HanXRQChr17g0542071 Helianthus annuus HOM05D004257 ORTHO05D005202 9.5e-147 523.9 344 77.9
Aa31sc35G30 Aethionema arabicum HOM05D004257 ORTHO05D005202 1.6e-146 523.1 346 75.4
Medtr7g097060 Medicago truncatula HOM05D004257 ORTHO05D005202 8.0e-146 520.8 343 77.6
CSS0001153 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 1.0e-145 520.4 345 77.7
Psat3g056800 Pisum sativum HOM05D004257 ORTHO05D005202 1.4e-145 520.0 343 77.3
MD10G1182800 Malus domestica HOM05D004257 ORTHO05D005202 4.0e-145 518.5 363 73.6
MD05G1195500 Malus domestica HOM05D004257 ORTHO05D005202 6.8e-145 517.7 326 80.1
Cpa.g.sc473.3 Carica papaya HOM05D004257 ORTHO05D005202 2.6e-144 515.8 338 76.9
arahy.Tifrunner.gnm1.ann1.63G7RJ Arachis hypogaea HOM05D004257 ORTHO05D005202 4.9e-143 511.5 341 76.0
VMungo1383G3387 Vigna mungo HOM05D004257 ORTHO05D005202 1.4e-142 510.0 346 74.3
CSS0049630 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 1.6e-141 506.5 344 77.0
Glyma.19G165400 Glycine max HOM05D004257 ORTHO05D005202 2.7e-141 505.8 345 73.9
Phvul.001G161500 Phaseolus vulgaris HOM05D004257 ORTHO05D005202 2.7e-141 505.8 346 74.6
Lalb_Chr01g0019631 Lupinus albus HOM05D004257 ORTHO05D005202 6.0e-141 504.6 344 74.4
arahy.Tifrunner.gnm1.ann1.BG7UA0 Arachis hypogaea HOM05D004257 ORTHO05D005202 1.9e-139 499.6 362 71.5
Oeu023635.1 Olea europaea HOM05D004257 ORTHO05D005202 1.9e-139 499.6 340 76.2
Lj1g0005279 Lotus japonicus HOM05D004257 ORTHO05D005202 4.3e-139 498.4 343 73.2
ATR0736G010 Amborella trichopoda HOM05D004257 ORTHO05D005202 6.8e-137 491.1 341 72.1
BraA07t29902Z Brassica rapa HOM05D004257 ORTHO05D005202 2.0e-136 489.6 348 71.6
CDE04G1210 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 9.8e-136 487.3 299 80.9
BcaC05g28242 Brassica carinata HOM05D004257 ORTHO05D005202 1.7e-135 486.5 347 71.2
BolC5t33007H Brassica oleracea HOM05D004257 ORTHO05D005202 1.7e-135 486.5 347 71.2
TPR.G7131 Trifolium pratense HOM05D004257 ORTHO05D005202 1.9e-134 483.0 384 68.2
HPP92_017366 Vanilla planifolia HOM05D004257 ORTHO05D005202 3.2e-134 482.3 344 70.6
unitig_0.g1405 Utricularia gibba HOM05D004257 ORTHO05D005202 1.6e-133 479.9 332 74.4
CSS0045427 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 1.1e-131 473.8 345 73.6
SalBow5G3197 Salvia bowleyana HOM05D004257 ORTHO05D005202 1.5e-131 473.4 292 81.5
SalBow5G4297 Salvia bowleyana HOM05D004257 ORTHO05D005202 1.5e-131 473.4 292 81.5
HPP92_010358 Vanilla planifolia HOM05D004257 ORTHO05D005202 9.5e-131 470.7 344 69.2
GSVIVG01028350001 Vitis vinifera HOM05D004257 ORTHO05D005202 4.7e-130 468.4 341 71.6
CDE02G1046 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 6.8e-129 464.5 341 70.1
unitig_61.g26464 Utricularia gibba HOM05D004257 ORTHO05D005202 1.5e-128 463.4 344 70.6
Os02g0158300 Oryza sativa ssp. japonica HOM05D004257 ORTHO05D005202 2.0e-128 463.0 345 67.2
Zm00001eb207770 Zea mays HOM05D004257 ORTHO05D005202 2.6e-128 462.6 346 67.3
AagrBONN_evm.TU.Sc2ySwM_344.1200 Anthoceros agrestis HOM05D004257 ORTHO05D005202 5.4e-126 454.9 320 69.1
Zm00001eb232580 Zea mays HOM05D004257 ORTHO05D005202 1.2e-125 453.8 348 65.8
Mapoly0023s0132 Marchantia polymorpha HOM05D004257 ORTHO05D005202 4.6e-125 451.8 324 66.7
AagrBONN_evm.TU.Sc2ySwM_344.3818 Anthoceros agrestis HOM05D004257 ORTHO05D005202 3.0e-124 449.1 320 68.8
SMO367G0216 Selaginella moellendorffii HOM05D004257 ORTHO05D005202 6.4e-119 431.4 319 66.1
EL10Ac4g09002 Beta vulgaris HOM05D004257 ORTHO05D005202 7.8e-117 424.5 271 77.1
Pp3c23_13620 Physcomitrium patens HOM05D004257 ORTHO05D005202 8.1e-114 414.5 319 63.9
Pp3c5_14840 Physcomitrium patens HOM05D004257 ORTHO05D005202 4.0e-113 412.1 333 62.2
CBR_g20340 Chara braunii HOM05D004257 ORTHO05D005202 3.4e-112 409.1 329 62.3
ECA246G4101 Erigeron canadensis HOM05D004257 ORTHO05D005202 4.8e-106 388.7 231 81.4
C05p42800 Brassica napus HOM05D004257 ORTHO05D005202 1.3e-103 380.6 255 73.3
CDE02G2420 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 8.7e-100 367.9 229 78.6
BcaB02g08451 Brassica carinata HOM05D004257 ORTHO05D005202 1.1e-94 350.9 209 81.3
Pp3c24_11040 Physcomitrium patens HOM05D004257 ORTHO05D005202 4.2e-86 322.4 298 57.0
CAN.G65.83 Capsicum annuum HOM05D004257 ORTHO05D005202 1.5e-83 313.9 248 67.3
PSO470G0001 Papaver somniferum HOM05D004257 ORTHO05D005202 2.8e-82 309.7 197 77.7
SGA_v2.0_scaffold25G10776 Striga asiatica HOM05D004257 ORTHO05D005202 2.9e-71 273.1 185 76.8
SEGI_22917 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 7.4e-67 258.5 182 68.1
SEGI_29481 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 7.4e-67 258.5 182 68.1
AagrBONN_evm.TU.Sc2ySwM_228.5393 Anthoceros agrestis HOM05D004257 ORTHO05D005202 3.6e-61 239.6 165 70.3
A07p22230 Brassica napus HOM05D004257 ORTHO05D005202 6.3e-58 228.8 131 83.2
Oeu036414.1 Olea europaea HOM05D004257 ORTHO05D005202 8.2e-58 228.4 123 90.2
Actinidia34751 Actinidia chinensis HOM05D000378 ORTHO05D005202 5.9e-56 222.2 137 77.4
SEGI_04972 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 2.7e-53 213.4 122 80.3
BcaC07g39794 Brassica carinata HOM05D004257 ORTHO05D005202 5.0e-47 192.6 164 61.6
BolC8t50595H Brassica oleracea HOM05D004257 ORTHO05D005202 7.2e-46 188.7 164 61.0
C08p29840 Brassica napus HOM05D004257 ORTHO05D005202 5.2e-44 182.6 164 60.4
AagrBONN_evm.TU.Sc2ySwM_228.5394 Anthoceros agrestis HOM05D004257 ORTHO05D005202 6.1e-37 159.1 129 59.7
Peaxi162Scf00643g00656 Petunia axillaris HOM05D004257 ORTHO05D005202 4.6e-32 142.9 118 68.6
Aqoxy1G04111 Aquilegia oxysepala HOM05D004257 ORTHO05D004515 1.4e-28 131.3 178 46.6
EL10Ac4g09003 Beta vulgaris HOM05D004257 ORTHO05D005202 5.8e-27 125.9 70 87.1
Lsat_1_v5_gn_8_28701 Lactuca sativa HOM05D004257 ORTHO05D005202 1.3e-26 124.8 92 69.6
Rhsim05G0133300 Rhododendron simsii HOM05D004257 ORTHO05D005202 1.2e-24 118.2 92 68.5
Lj6g0021985 Lotus japonicus HOM05D004257 ORTHO05D236371 8.9e-20 102.1 78 64.1
Pp3c2_23370 Physcomitrium patens HOM05D004257 ORTHO05D005202 1.9e-17 94.4 118 44.1
Rhsim08G0010200 Rhododendron simsii HOM05D000535 ORTHO05D000427 1.9e-17 94.4 71 66.2
BcaB01g01067 Brassica carinata HOM05D004257 ORTHO05D092693 2.3e-15 87.4 78 56.4
Rhsim04G0042100 Rhododendron simsii HOM05D004257 ORTHO05D005202 1.4e-12 78.2 146 39.0
Lsat_1_v5_gn_6_26721 Lactuca sativa HOM05D004257 ORTHO05D230427 4.1e-09 66.6 42 81.0
RhsimUnG0176200 Rhododendron simsii HOM05D000026 ORTHO05D000127 1.6e-08 64.7 51 64.7
CDE04G3164 Ceratophyllum demersum HOM05D004257 ORTHO05D130150 1.7e-07 61.2 36 69.4


User provided reference genes

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