Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G630.36 Capsicum annuum HOM05D000181 ORTHO05D008575 5.9e-81 304.3 171 100.0
Nitab4.5_0003039g0070 Nicotiana tabacum HOM05D000181 ORTHO05D008575 7.8e-49 197.6 177 71.8
Nitab4.5_0003909g0010 Nicotiana tabacum HOM05D000181 ORTHO05D008575 1.9e-47 193.0 177 71.2
CAN.G144.16 Capsicum annuum HOM05D000181 ORTHO05D008575 3.3e-47 192.2 177 65.0
PGSC0003DMG400026452 Solanum tuberosum HOM05D000181 ORTHO05D008575 1.2e-46 190.3 175 70.9
Solyc12g044400.3 Solanum lycopersicum HOM05D000181 ORTHO05D008575 7.8e-41 171.0 138 71.0
Sopen12g022670 Solanum pennellii HOM05D000181 ORTHO05D008575 1.6e-38 163.3 132 70.5
Dinv12493 Davidia involucrata HOM05D000181 ORTHO05D008575 4.0e-37 158.7 180 52.8
CSS0004299 Camellia sinensis var. sinensis HOM05D000181 ORTHO05D008575 3.8e-35 152.1 180 52.8
CSS0017490 Camellia sinensis var. sinensis HOM05D000181 ORTHO05D008575 3.8e-35 152.1 180 52.8
Migut.I00912 Erythranthe guttata HOM05D000181 ORTHO05D008575 3.8e-35 152.1 175 47.4
SalBow1G1633 Salvia bowleyana HOM05D000181 ORTHO05D008575 9.3e-34 147.5 175 52.6
SalBow2G0704 Salvia bowleyana HOM05D000181 ORTHO05D008575 9.3e-34 147.5 175 52.6
Peaxi162Scf00034g00312 Petunia axillaris HOM05D000181 ORTHO05D008575 1.9e-31 139.8 180 57.2
Lj9A511G45 Lonicera japonica HOM05D000181 ORTHO05D008575 4.3e-31 138.7 167 49.1
Hma1.2p1_1056F.1_g252680 Hydrangea macrophylla HOM05D000181 ORTHO05D008575 9.0e-29 131.0 117 59.0
Prupe.3G061400 Prunus persica HOM05D000181 ORTHO05D008575 1.2e-28 130.6 177 49.7
CANSAT56G0902 Cannabis sativa HOM05D000181 ORTHO05D008575 3.8e-27 125.6 177 45.2
Oeu063939.2 Olea europaea HOM05D000181 ORTHO05D008575 3.8e-27 125.6 113 57.5
Gorai.003G063400 Gossypium raimondii HOM05D000181 ORTHO05D008575 4.9e-27 125.2 177 48.0
ATR0705G164 Amborella trichopoda HOM05D000181 ORTHO05D008575 6.4e-27 124.8 173 41.0
MSTRG.9480 Avicennia marina HOM05D000181 ORTHO05D008575 8.4e-27 124.4 120 54.2
unitig_85.g27213 Utricularia gibba HOM05D000181 ORTHO05D008575 8.4e-27 124.4 175 48.6
AUR62031883 Chenopodium quinoa HOM05D000181 ORTHO05D008575 1.1e-26 124.0 175 41.1
MD09G1206000 Malus domestica HOM05D000181 ORTHO05D008575 1.6e-25 120.2 178 48.3
CDE02G1661 Ceratophyllum demersum HOM05D000181 ORTHO05D008575 2.1e-25 119.8 178 37.6
EL10Ac9g22103 Beta vulgaris HOM05D000181 ORTHO05D008575 6.0e-25 118.2 173 47.4
Sabra03G0028300 Salix brachista HOM05D000181 ORTHO05D008575 1.0e-24 117.5 177 46.3
Aqoxy7G01471 Aquilegia oxysepala HOM05D000181 ORTHO05D008575 2.3e-24 116.3 176 43.8
Potri.003G050600 Populus trichocarpa HOM05D000181 ORTHO05D008575 3.0e-24 115.9 177 39.5
Atru.chr1.3496 Acer truncatum HOM05D000181 ORTHO05D008575 1.1e-23 114.0 178 43.3
Duzib235G0087 Durio zibethinus HOM05D000181 ORTHO05D008575 1.5e-23 113.6 176 41.5
Gohir.A02G118800 Gossypium hirsutum HOM05D000181 ORTHO05D008575 1.9e-23 113.2 177 45.2
Nn2g11617 Nelumbo nucifera HOM05D000181 ORTHO05D008575 1.9e-23 113.2 117 53.0
Hund06652 Selenicereus undatus HOM05D000181 ORTHO05D008575 2.5e-23 112.8 125 48.8
FAN05G1720 Fragaria x ananassa HOM05D000181 ORTHO05D008575 4.3e-23 112.1 180 41.1
FAN02G2536 Fragaria x ananassa HOM05D000181 ORTHO05D008575 5.6e-23 111.7 180 40.6
Prupe.3G065400 Prunus persica HOM05D000181 ORTHO05D008575 1.6e-22 110.2 163 48.5
FvH4_6g32150 Fragaria vesca HOM05D000181 ORTHO05D008575 4.8e-22 108.6 180 40.6
FAN14G4410 Fragaria x ananassa HOM05D000181 ORTHO05D008575 4.8e-22 108.6 180 40.6
RcHm_v2.0_Chr2g0140041 Rosa chinensis HOM05D000181 ORTHO05D008575 6.2e-22 108.2 180 41.1
HPP92_021370 Vanilla planifolia HOM05D000181 ORTHO05D008575 6.2e-22 108.2 177 36.2
Lsat_1_v5_gn_4_99881 Lactuca sativa HOM05D000181 ORTHO05D008575 8.1e-22 107.8 112 47.3
Sed0006712 Sechium edule HOM05D000181 ORTHO05D008575 8.1e-22 107.8 134 47.0
TAR624G1089 Trochodendron aralioides HOM05D000181 ORTHO05D008575 1.1e-21 107.5 175 38.9
Gohir.D03G059400 Gossypium hirsutum HOM05D000181 ORTHO05D008575 1.4e-21 107.1 177 44.6
MELO3C024457.2 Cucumis melo HOM05D000181 ORTHO05D008575 5.3e-21 105.1 139 45.3
CAN.G665.10 Capsicum annuum HOM05D000181 ORTHO05D008575 9.0e-21 104.4 153 47.7
FAN09G0786 Fragaria x ananassa HOM05D000181 ORTHO05D008575 9.0e-21 104.4 180 39.4
HanXRQChr16g0501241 Helianthus annuus HOM05D000181 ORTHO05D008575 1.5e-20 103.6 134 41.0
Thecc.06G097300 Theobroma cacao HOM05D000181 ORTHO05D008575 1.5e-20 103.6 118 45.8
GSVIVG01017029001 Vitis vinifera HOM05D000181 ORTHO05D008575 1.5e-20 103.6 123 48.8
ClCG09G000030 Citrullus lanatus HOM05D000181 ORTHO05D008575 2.0e-20 103.2 119 48.7
PSO832G1282 Papaver somniferum HOM05D000181 ORTHO05D008575 2.6e-20 102.8 133 45.1
DCAR_026344 Daucus carota HOM05D000181 ORTHO05D008575 3.4e-20 102.4 140 46.4
ECA232G1272 Erigeron canadensis HOM05D000181 ORTHO05D008575 3.4e-20 102.4 112 45.5
PSO173G0181 Papaver somniferum HOM05D000181 ORTHO05D008575 5.8e-20 101.7 133 44.4
Sc15g0001980 Simmondsia chinensis HOM05D000181 ORTHO05D008575 7.6e-20 101.3 172 44.2
AUR62022180 Chenopodium quinoa HOM05D000181 ORTHO05D008575 1.3e-19 100.5 175 43.4
Aa31LG8G3440 Aethionema arabicum HOM05D000181 ORTHO05D008575 1.7e-19 100.1 175 41.1
THA.LOC104817967 Tarenaya hassleriana HOM05D000181 ORTHO05D008575 2.9e-19 99.4 175 40.0
CiPaw.01G233000 Carya illinoinensis HOM05D000181 ORTHO05D008575 6.5e-19 98.2 141 41.1
Haze_15820 Corylus avellana HOM05D000181 ORTHO05D008575 6.5e-19 98.2 182 42.3
AT3G16290 Arabidopsis thaliana HOM05D000181 ORTHO05D008575 8.4e-19 97.8 175 42.3
TWI18G0540 Tripterygium wilfordii HOM05D000181 ORTHO05D008575 1.4e-18 97.1 129 40.3
COL.COLO4_30485 Corchorus olitorius HOM05D000181 ORTHO05D008575 1.9e-18 96.7 120 45.0
AL3G29030 Arabidopsis lyrata HOM05D000181 ORTHO05D008575 3.2e-18 95.9 175 41.7
VMungo1080G1473 Vigna mungo HOM05D000181 ORTHO05D008575 5.5e-18 95.1 183 39.9
Eucgr.D02583 Eucalyptus grandis HOM05D000181 ORTHO05D008575 9.3e-18 94.4 121 38.8
CARHR091500 Cardamine hirsuta HOM05D000181 ORTHO05D008575 2.7e-17 92.8 177 40.1
Cfa003671 Carpinus fangiana HOM05D000181 ORTHO05D008575 2.7e-17 92.8 182 40.7
Thhalv10020028m.g Eutrema salsugineum HOM05D000181 ORTHO05D008575 2.7e-17 92.8 114 43.9
BcaB06g25720 Brassica carinata HOM05D000181 ORTHO05D008575 1.3e-16 90.5 114 42.1
PGR102G3096 Punica granatum HOM05D000181 ORTHO05D008575 1.8e-16 90.1 124 38.7
SGA_v2.0_scaffold69G23331 Striga asiatica HOM05D000181 ORTHO05D008575 1.8e-16 90.1 169 43.8
BcaC05g28897 Brassica carinata HOM05D000181 ORTHO05D008575 2.3e-16 89.7 174 40.2
Lalb_Chr24g0396101 Lupinus albus HOM05D000181 ORTHO05D008575 3.0e-16 89.4 181 39.2
C05p50220 Brassica napus HOM05D000181 ORTHO05D008575 3.9e-16 89.0 114 42.1
BolC5t33772H Brassica oleracea HOM05D000181 ORTHO05D008575 3.9e-16 89.0 114 42.1
BraA05t22148Z Brassica rapa HOM05D000181 ORTHO05D008575 3.9e-16 89.0 174 39.7
Ciclev10024860m.g Citrus clementina HOM05D000181 ORTHO05D008575 3.9e-16 89.0 116 42.2
QL05p020644 Quercus lobata HOM05D000181 ORTHO05D008575 1.1e-15 87.4 179 40.2
A05p33230 Brassica napus HOM05D000181 ORTHO05D008575 1.5e-15 87.0 174 39.7
Psat5g297120 Pisum sativum HOM05D000181 ORTHO05D008575 3.3e-15 85.9 144 34.7
Sp3g14660 Schrenkiella parvula HOM05D000181 ORTHO05D008575 4.3e-15 85.5 175 40.0
Manes.11G035200 Manihot esculenta HOM05D000181 ORTHO05D008575 9.6e-15 84.3 137 38.7
Ca_01156_v3 Cicer arietinum L. HOM05D000181 ORTHO05D008575 6.2e-14 81.6 144 36.8
Glyma.13G355400 Glycine max HOM05D000181 ORTHO05D008575 1.8e-13 80.1 128 35.9
Phvul.005G167100 Phaseolus vulgaris HOM05D000181 ORTHO05D008575 3.1e-13 79.3 131 36.6
Glyma.15G018800 Glycine max HOM05D000181 ORTHO05D008575 5.3e-13 78.6 176 36.4
Lj3g0006443 Lotus japonicus HOM05D000181 ORTHO05D008575 6.9e-13 78.2 145 33.1
Medtr2g101290 Medicago truncatula HOM05D000181 ORTHO05D008575 1.2e-12 77.4 148 35.1
arahy.Tifrunner.gnm1.ann1.K5ELC5 Arachis hypogaea HOM05D000181 ORTHO05D008575 4.5e-12 75.5 108 36.1
arahy.Tifrunner.gnm1.ann1.34YIIN Arachis hypogaea HOM05D000181 ORTHO05D008575 7.6e-12 74.7 108 36.1
Lj9A524T51 Lonicera japonica HOM05D000181 ORTHO05D008575 1.9e-10 70.1 85 45.9
AagrBONN_evm.TU.Sc2ySwM_228.674 Anthoceros agrestis HOM05D000181 ORTHO05D008575 2.5e-10 69.7 140 35.7
Mapoly0056s0018 Marchantia polymorpha HOM05D000181 ORTHO05D008575 1.5e-07 60.5 145 31.7
SEGI_09696 Sequoiadendron giganteum HOM05D000181 ORTHO05D008575 2.5e-07 59.7 77 37.7


User provided reference genes

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