Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G624.26 Capsicum annuum HOM05D006744 ORTHO05D008730 2.5e-104 382.1 192 100.0
CAN.G84.41 Capsicum annuum HOM05D002560 ORTHO05D000293 1.6e-50 203.4 126 85.7
CAN.G141.11 Capsicum annuum HOM05D006744 ORTHO05D008730 7.5e-32 141.4 86 83.7
Solyc06g005710.3 Solanum lycopersicum HOM05D006744 ORTHO05D008730 1.3e-31 140.6 86 82.6
Sopen06g001690 Solanum pennellii HOM05D006744 ORTHO05D008730 1.3e-31 140.6 86 82.6
PGSC0003DMG400002146 Solanum tuberosum HOM05D006744 ORTHO05D008730 1.3e-31 140.6 86 82.6
Peaxi162Scf00265g00210 Petunia axillaris HOM05D006744 ORTHO05D008730 2.2e-28 129.8 100 68.0
DCAR_005941 Daucus carota HOM05D006744 ORTHO05D008730 2.0e-24 116.7 81 75.3
CAN.G399.7 Capsicum annuum HOM05D006744 ORTHO05D008730 4.4e-24 115.5 74 81.1
QL01p029218 Quercus lobata HOM05D006744 ORTHO05D008730 1.3e-23 114.0 82 70.7
MD03G1086000 Malus domestica HOM05D006744 ORTHO05D008730 2.2e-23 113.2 82 69.5
MSTRG.21220 Avicennia marina HOM05D006744 ORTHO05D008730 2.8e-23 112.8 84 71.4
VMungo1127G1123 Vigna mungo HOM05D006744 ORTHO05D008730 3.7e-23 112.5 85 70.6
Sed0004789 Sechium edule HOM05D006744 ORTHO05D008730 4.8e-23 112.1 82 68.3
CANSAT54G0933 Cannabis sativa HOM05D006744 ORTHO05D008730 6.3e-23 111.7 84 69.0
Eucgr.B02306 Eucalyptus grandis HOM05D006744 ORTHO05D008730 6.3e-23 111.7 82 69.5
Thhalv10002484m.g Eutrema salsugineum HOM05D006744 ORTHO05D008730 1.1e-22 110.9 81 67.9
Potri.001G244800 Populus trichocarpa HOM05D006744 ORTHO05D008730 1.1e-22 110.9 86 66.3
AL5G25790 Arabidopsis lyrata HOM05D006744 ORTHO05D008730 1.8e-22 110.2 84 64.3
Migut.D00876 Erythranthe guttata HOM05D006744 ORTHO05D008730 1.8e-22 110.2 85 67.1
Glyma.11G135900 Glycine max HOM05D006744 ORTHO05D008730 1.8e-22 110.2 85 68.2
Gorai.001G112600 Gossypium raimondii HOM05D006744 ORTHO05D008730 2.4e-22 109.8 84 65.5
Sp5g14930 Schrenkiella parvula HOM05D006744 ORTHO05D008730 2.4e-22 109.8 84 64.3
AT3G46780 Arabidopsis thaliana HOM05D006744 ORTHO05D008730 3.1e-22 109.4 84 64.3
CARHR154880 Cardamine hirsuta HOM05D006744 ORTHO05D008730 3.1e-22 109.4 79 68.4
Oeu004177.1 Olea europaea HOM05D006744 ORTHO05D008730 3.1e-22 109.4 82 69.5
GSVIVG01024905001 Vitis vinifera HOM05D006744 ORTHO05D008730 3.1e-22 109.4 82 72.0
Gohir.A07G100500 Gossypium hirsutum HOM05D006744 ORTHO05D008730 4.1e-22 109.0 84 65.5
Actinidia08543 Actinidia chinensis HOM05D006744 ORTHO05D008730 5.4e-22 108.6 79 69.6
A01p26030 Brassica napus HOM05D006744 ORTHO05D008730 5.4e-22 108.6 81 65.4
BolC1t03248H Brassica oleracea HOM05D006744 ORTHO05D008730 5.4e-22 108.6 81 65.4
BraA01t02520Z Brassica rapa HOM05D006744 ORTHO05D008730 5.4e-22 108.6 81 65.4
Lalb_Chr01g0003461 Lupinus albus HOM05D006744 ORTHO05D008730 5.4e-22 108.6 80 72.5
Prupe.6G070200 Prunus persica HOM05D006744 ORTHO05D008730 5.4e-22 108.6 84 66.7
BcaB05g23514 Brassica carinata HOM05D006744 ORTHO05D008730 7.0e-22 108.2 81 65.4
CiPaw.13G089100 Carya illinoinensis HOM05D006744 ORTHO05D008730 7.0e-22 108.2 84 66.7
Potri.009G037000 Populus trichocarpa HOM05D006744 ORTHO05D008730 9.1e-22 107.8 86 66.3
Aa31LG4G15710 Aethionema arabicum HOM05D006744 ORTHO05D008730 1.2e-21 107.5 79 67.1
arahy.Tifrunner.gnm1.ann1.5LUI7K Arachis hypogaea HOM05D006744 ORTHO05D008730 1.2e-21 107.5 83 69.9
arahy.Tifrunner.gnm1.ann1.6RB142 Arachis hypogaea HOM05D006744 ORTHO05D008730 1.2e-21 107.5 83 69.9
DCAR_007429 Daucus carota HOM05D006744 ORTHO05D008730 1.2e-21 107.5 81 70.4
Nn2g11215 Nelumbo nucifera HOM05D006744 ORTHO05D008730 1.2e-21 107.5 81 67.9
Ciclev10030042m.g Citrus clementina HOM05D006744 ORTHO05D008730 1.6e-21 107.1 79 69.6
MELO3C025888.2 Cucumis melo HOM05D006744 ORTHO05D008730 1.6e-21 107.1 82 67.1
Gohir.D07G104700 Gossypium hirsutum HOM05D006744 ORTHO05D008730 1.6e-21 107.1 84 64.3
Lj2C1069T8 Lonicera japonica HOM05D006744 ORTHO05D008730 1.6e-21 107.1 85 63.5
vmacro03026 Vaccinium macrocarpon HOM05D006744 ORTHO05D008730 1.6e-21 107.1 79 69.6
Carub.0005s1303 Capsella rubella HOM05D006744 ORTHO05D008730 2.0e-21 106.7 82 64.6
CsaV3_6G016590 Cucumis sativus L. HOM05D006744 ORTHO05D008730 2.0e-21 106.7 82 67.1
CsaV3_7G010020 Cucumis sativus L. HOM05D006744 ORTHO05D008730 2.0e-21 106.7 82 67.1
Lj3g0003575 Lotus japonicus HOM05D006744 ORTHO05D008730 2.0e-21 106.7 79 68.4
Phvul.011G061600 Phaseolus vulgaris HOM05D006744 ORTHO05D008730 2.0e-21 106.7 85 67.1
Atru.chr3.3995 Acer truncatum HOM05D006744 ORTHO05D008730 3.5e-21 105.9 84 63.1
Actinidia01965 Actinidia chinensis HOM05D006744 ORTHO05D008730 3.5e-21 105.9 74 71.6
Haze_24171 Corylus avellana HOM05D006744 ORTHO05D008730 3.5e-21 105.9 86 67.4
Haze_24176 Corylus avellana HOM05D006744 ORTHO05D008730 3.5e-21 105.9 86 67.4
TPR.G23627 Trifolium pratense HOM05D006744 ORTHO05D008730 3.5e-21 105.9 86 67.4
BcaC09g49774 Brassica carinata HOM05D006744 ORTHO05D008730 5.9e-21 105.1 81 64.2
C01p33110 Brassica napus HOM05D006744 ORTHO05D008730 5.9e-21 105.1 81 64.2
PGR102G0876 Punica granatum HOM05D006744 ORTHO05D008730 5.9e-21 105.1 90 62.2
Ca_20615_v3 Cicer arietinum L. HOM05D006744 ORTHO05D008730 2.3e-20 103.2 84 67.9
ClCG02G019880 Citrullus lanatus HOM05D006744 ORTHO05D008730 2.3e-20 103.2 82 65.9
Medtr4g064750 Medicago truncatula HOM05D006744 ORTHO05D008730 2.9e-20 102.8 110 58.2
Thecc.09G315400 Theobroma cacao HOM05D006744 ORTHO05D008730 3.8e-20 102.4 82 62.2
ECA248G1499 Erigeron canadensis HOM05D006744 ORTHO05D008730 5.0e-20 102.1 85 63.5
Psat7g210440 Pisum sativum HOM05D006744 ORTHO05D008730 5.0e-20 102.1 84 66.7
COL.COLO4_18579 Corchorus olitorius HOM05D006744 ORTHO05D008730 6.6e-20 101.7 82 61.0
FvH4_3g36950 Fragaria vesca HOM05D006744 ORTHO05D008730 8.6e-20 101.3 82 65.9
TWI79G0292 Tripterygium wilfordii HOM05D006744 ORTHO05D008730 8.6e-20 101.3 83 65.1
Duzib168G0134 Durio zibethinus HOM05D006744 ORTHO05D008730 1.1e-19 100.9 82 61.0
Cc01_g13360 Coffea canephora HOM05D006744 ORTHO05D008730 1.9e-19 100.1 82 65.9
CAN.G73.7 Capsicum annuum HOM05D003767 ORTHO05D000047 2.5e-19 99.8 74 70.3
SGA_v2.0_scaffold20G09292 Striga asiatica HOM05D006744 ORTHO05D008730 2.5e-19 99.8 76 69.7
Dinv34288 Davidia involucrata HOM05D006744 ORTHO05D008730 3.3e-19 99.4 86 66.3
HanXRQChr01g0010651 Helianthus annuus HOM05D006744 ORTHO05D008730 4.2e-19 99.0 81 64.2
RcHm_v2.0_Chr5g0066371 Rosa chinensis HOM05D006744 ORTHO05D008730 7.2e-19 98.2 82 63.4
THA.LOC104810751 Tarenaya hassleriana HOM05D006744 ORTHO05D008730 7.2e-19 98.2 79 62.0
CSS0019879 Camellia sinensis var. sinensis HOM05D006744 ORTHO05D008730 9.5e-19 97.8 80 67.5
CSS0020219 Camellia sinensis var. sinensis HOM05D006744 ORTHO05D008730 9.5e-19 97.8 80 67.5
TAR636G2563 Trochodendron aralioides HOM05D006744 ORTHO05D008730 1.2e-18 97.4 81 63.0
TAR636G3279 Trochodendron aralioides HOM05D006744 ORTHO05D008730 1.2e-18 97.4 81 63.0
PSO513G0104 Papaver somniferum HOM05D006744 ORTHO05D008730 1.6e-18 97.1 76 64.5
Manes.02G128600 Manihot esculenta HOM05D006744 ORTHO05D008730 2.8e-18 96.3 79 65.8
MBI14_g11597_MAGBIO Magnolia biondii HOM05D006744 ORTHO05D008730 6.1e-18 95.1 81 58.0
CDE09G0068 Ceratophyllum demersum HOM05D006744 ORTHO05D008730 2.3e-17 93.2 78 59.0
Glyma.12G059600 Glycine max HOM05D006744 ORTHO05D008730 2.3e-17 93.2 85 62.4
Lsat_1_v5_gn_5_169660 Lactuca sativa HOM05D006744 ORTHO05D008730 2.3e-17 93.2 82 62.2
Duzib170G1039 Durio zibethinus HOM05D006744 ORTHO05D008730 4.0e-17 92.4 82 57.3
CDE02G4503 Ceratophyllum demersum HOM05D006744 ORTHO05D008730 8.9e-17 91.3 78 59.0
ATR0559G062 Amborella trichopoda HOM05D006744 ORTHO05D008730 1.5e-16 90.5 81 56.8
Os05g0291700 Oryza sativa ssp. japonica HOM05D006744 ORTHO05D008730 1.5e-16 90.5 82 58.5
HanXRQChr11g0340641 Helianthus annuus HOM05D006744 ORTHO05D008730 2.6e-16 89.7 84 59.5
Cpa.g.sc81.95 Carica papaya HOM05D006744 ORTHO05D008730 3.4e-16 89.4 65 72.3
Actinidia33767 Actinidia chinensis HOM05D006744 ORTHO05D008730 5.7e-16 88.6 72 63.9
unitig_746.g26716 Utricularia gibba HOM05D006744 ORTHO05D008730 1.3e-15 87.4 82 61.0
Ah.08g220080 Amaranthus hybridus HOM05D006744 ORTHO05D008730 2.8e-15 86.3 87 58.6
AUR62020042 Chenopodium quinoa HOM05D006744 ORTHO05D008730 6.3e-15 85.1 75 65.3
Manes.01G169200 Manihot esculenta HOM05D006744 ORTHO05D008730 6.3e-15 85.1 76 64.5
Aqoxy2G02327 Aquilegia oxysepala HOM05D006744 ORTHO05D008730 1.1e-14 84.3 76 61.8
EL10Ac7g16071 Beta vulgaris HOM05D006744 ORTHO05D008730 1.4e-14 84.0 83 59.0
Hund04920 Selenicereus undatus HOM05D006744 ORTHO05D008730 1.6e-13 80.5 81 58.0
Nitab4.5_0000102g0310 Nicotiana tabacum HOM05D006744 ORTHO05D008730 4.5e-13 79.0 47 80.9
Sc21g0006010 Simmondsia chinensis HOM05D006744 ORTHO05D008730 7.8e-13 78.2 82 52.4
HPP92_012610 Vanilla planifolia HOM05D006744 ORTHO05D008730 1.9e-11 73.6 72 55.6
Mapoly0154s0018 Marchantia polymorpha HOM05D006744 ORTHO05D008730 2.8e-10 69.7 64 56.2
SEGI_15287 Sequoiadendron giganteum HOM05D006744 ORTHO05D008730 4.7e-10 68.9 110 40.0
CBR_g39489 Chara braunii HOM05D006744 ORTHO05D008730 6.1e-10 68.6 64 51.6
Pp3c1_14800 Physcomitrium patens HOM05D006744 ORTHO05D008730 1.4e-09 67.4 72 47.2
Zm00001eb346280 Zea mays HOM05D006744 ORTHO05D008730 1.2e-08 64.3 77 50.6
AagrBONN_evm.TU.Sc2ySwM_117.3415 Anthoceros agrestis HOM05D006744 ORTHO05D008730 1.7e-07 60.5 59 52.5
SMO145G0221 Selaginella moellendorffii HOM05D006744 ORTHO05D008730 2.2e-07 60.1 54 55.6


User provided reference genes

Program Settings