Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G6.23 Capsicum annuum HOM05D006924 ORTHO05D008218 8.9e-166 587.0 334 100.0
Nitab4.5_0009676g0020 Nicotiana tabacum HOM05D006924 ORTHO05D008218 1.3e-103 380.6 341 71.3
PGSC0003DMG400020785 Solanum tuberosum HOM05D006924 ORTHO05D008218 1.0e-97 360.9 333 69.4
Solyc08g061140.3 Solanum lycopersicum HOM05D006924 ORTHO05D008218 5.9e-93 345.1 335 67.2
Nitab4.5_0002007g0080 Nicotiana tabacum HOM05D006924 ORTHO05D008218 2.9e-92 342.8 268 72.8
Sopen08g016210 Solanum pennellii HOM05D006924 ORTHO05D008218 5.0e-92 342.0 335 67.2
Peaxi162Scf00073g01120 Petunia axillaris HOM05D006924 ORTHO05D008218 7.8e-77 291.6 265 64.2
GSVIVG01035827001 Vitis vinifera HOM05D006924 ORTHO05D008218 4.7e-74 282.3 324 54.6
CSS0024674 Camellia sinensis var. sinensis HOM05D006924 ORTHO05D008218 1.8e-73 280.4 307 55.7
TWI34G0486 Tripterygium wilfordii HOM05D006924 ORTHO05D008218 7.5e-72 275.0 340 56.2
Cc08_g00950 Coffea canephora HOM05D006924 ORTHO05D008218 3.7e-71 272.7 268 57.1
TWI63G1089 Tripterygium wilfordii HOM05D006924 ORTHO05D008218 5.6e-67 258.8 264 56.8
Potri.006G251700 Populus trichocarpa HOM05D006924 ORTHO05D008218 2.8e-66 256.5 337 54.0
Actinidia13248 Actinidia chinensis HOM05D006924 ORTHO05D008218 1.8e-65 253.8 260 56.5
vmacro11153 Vaccinium macrocarpon HOM05D006924 ORTHO05D008218 4.0e-65 252.7 275 52.7
Sabra06G0196700 Salix brachista HOM05D006924 ORTHO05D008218 8.9e-65 251.5 327 53.5
HanXRQChr08g0234821 Helianthus annuus HOM05D006924 ORTHO05D008218 4.4e-64 249.2 343 50.4
Cfa013171 Carpinus fangiana HOM05D006924 ORTHO05D008218 9.8e-64 248.1 267 56.9
Migut.E01789 Erythranthe guttata HOM05D006924 ORTHO05D008218 3.7e-63 246.1 260 56.5
Dinv15967 Davidia involucrata HOM05D006924 ORTHO05D008218 1.1e-62 244.6 273 54.2
Dinv18229 Davidia involucrata HOM05D006924 ORTHO05D008218 1.1e-62 244.6 273 54.2
VMungo1309G0550 Vigna mungo HOM05D006924 ORTHO05D008218 1.4e-62 244.2 259 55.2
Glyma.06G069700 Glycine max HOM05D006924 ORTHO05D008218 2.4e-62 243.4 266 54.5
unitig_26.g9317 Utricularia gibba HOM05D006924 ORTHO05D008218 3.2e-62 243.0 264 54.9
Lsat_1_v5_gn_5_30481 Lactuca sativa HOM05D006924 ORTHO05D008218 1.2e-61 241.1 297 50.2
PSO455G0271 Papaver somniferum HOM05D006924 ORTHO05D008218 6.0e-61 238.8 323 48.6
Lj1g0004722 Lotus japonicus HOM05D006924 ORTHO05D008218 7.8e-61 238.4 263 54.0
MSTRG.1715 Avicennia marina HOM05D006924 ORTHO05D008218 3.9e-60 236.1 272 54.4
ECA246G2052 Erigeron canadensis HOM05D000004 ORTHO05D000048 5.1e-60 235.7 306 50.0
Glyma.04G068000 Glycine max HOM05D006924 ORTHO05D008218 5.1e-60 235.7 262 55.0
Rhsim02G0195700 Rhododendron simsii HOM05D006924 ORTHO05D008218 8.6e-60 235.0 275 52.7
Nn8g39393 Nelumbo nucifera HOM05D006924 ORTHO05D008218 1.1e-59 234.6 257 54.5
Lalb_Chr23g0268731 Lupinus albus HOM05D006924 ORTHO05D008218 1.9e-59 233.8 268 54.9
SGA_v2.0_scaffold163G37992 Striga asiatica HOM05D004464 ORTHO05D005135 1.9e-59 233.8 274 54.0
FAN20G0173 Fragaria x ananassa HOM05D006924 ORTHO05D008218 5.6e-59 232.3 279 51.3
FAN24G1985 Fragaria x ananassa HOM05D006924 ORTHO05D008218 5.6e-59 232.3 281 51.6
THA.LOC104815037 Tarenaya hassleriana HOM05D006924 ORTHO05D008218 7.3e-59 231.9 261 52.9
QL02p022351 Quercus lobata HOM05D006924 ORTHO05D008218 1.6e-58 230.7 341 49.9
Ca_15720_v3 Cicer arietinum L. HOM05D006924 ORTHO05D008218 2.8e-58 229.9 263 53.2
Sc09g0008380 Simmondsia chinensis HOM05D006924 ORTHO05D008218 3.6e-58 229.6 273 50.2
Aa31LG3G15920 Aethionema arabicum HOM05D006924 ORTHO05D008218 6.2e-58 228.8 258 54.3
CARHR201990 Cardamine hirsuta HOM05D006924 ORTHO05D008218 8.1e-58 228.4 320 47.5
Thecc.09G150000 Theobroma cacao HOM05D006924 ORTHO05D008218 8.1e-58 228.4 264 54.5
Phvul.009G094300 Phaseolus vulgaris HOM05D006924 ORTHO05D008218 1.4e-57 227.6 263 52.5
Ciclev10010768m.g Citrus clementina HOM05D006924 ORTHO05D008218 1.8e-57 227.3 332 53.0
PSO455G0276 Papaver somniferum HOM05D006924 ORTHO05D008218 1.8e-57 227.3 281 50.2
PSO170G6279 Papaver somniferum HOM05D006924 ORTHO05D008218 3.1e-57 226.5 283 49.1
Manes.03G016800 Manihot esculenta HOM05D006924 ORTHO05D008218 5.2e-57 225.7 263 52.5
FAN27G0236 Fragaria x ananassa HOM05D006924 ORTHO05D008218 6.8e-57 225.3 274 50.7
Gorai.004G274200 Gossypium raimondii HOM05D006924 ORTHO05D008218 1.2e-56 224.6 271 52.4
Sp6g32290 Schrenkiella parvula HOM05D006924 ORTHO05D008218 3.4e-56 223.0 255 53.7
Aqoxy7G02106 Aquilegia oxysepala HOM05D006924 ORTHO05D008218 4.4e-56 222.6 272 50.7
CDE04G2397 Ceratophyllum demersum HOM05D006924 ORTHO05D008218 4.4e-56 222.6 260 52.7
DCAR_001517 Daucus carota HOM05D006924 ORTHO05D008218 5.8e-56 222.2 309 46.3
Rhsim02G0198800 Rhododendron simsii HOM05D006924 ORTHO05D008218 5.8e-56 222.2 307 47.6
MELO3C003685.2 Cucumis melo HOM05D006924 ORTHO05D008218 9.9e-56 221.5 266 50.4
Hund25749 Selenicereus undatus HOM05D006924 ORTHO05D008218 9.9e-56 221.5 283 48.8
FvH4_2g29450 Fragaria vesca HOM05D006924 ORTHO05D008218 1.3e-55 221.1 281 50.5
CsaV3_3G046540 Cucumis sativus L. HOM05D006924 ORTHO05D008218 3.8e-55 219.5 266 51.1
Gohir.D08G257200 Gossypium hirsutum HOM05D006924 ORTHO05D008218 6.4e-55 218.8 271 51.3
Psat5g028520 Pisum sativum HOM05D006924 ORTHO05D008218 6.4e-55 218.8 273 49.8
Carub.0006s0974 Capsella rubella HOM05D006924 ORTHO05D008218 2.4e-54 216.9 253 53.0
AL6G21900 Arabidopsis lyrata HOM05D006924 ORTHO05D008218 3.2e-54 216.5 259 52.5
AT5G11270 Arabidopsis thaliana HOM05D006924 ORTHO05D008218 1.2e-53 214.5 261 52.5
COL.COLO4_00196 Corchorus olitorius HOM05D006924 ORTHO05D008218 2.1e-53 213.8 264 53.8
Duzib187G1593 Durio zibethinus HOM05D006924 ORTHO05D008218 1.7e-52 210.7 269 52.8
BcaC04g19245 Brassica carinata HOM05D006924 ORTHO05D008218 2.3e-52 210.3 259 52.9
A10p26450 Brassica napus HOM05D006924 ORTHO05D008218 2.3e-52 210.3 256 53.5
Ah.12g064050 Amaranthus hybridus HOM05D006924 ORTHO05D008218 3.0e-52 209.9 303 43.9
BraA10t44702Z Brassica rapa HOM05D006924 ORTHO05D008218 3.9e-52 209.5 258 53.1
Cpa.g.sc115.10 Carica papaya HOM05D006924 ORTHO05D008218 3.9e-52 209.5 250 52.0
ClCG05G017060 Citrullus lanatus HOM05D006924 ORTHO05D008218 3.9e-52 209.5 283 48.1
BcaB08g37076 Brassica carinata HOM05D006924 ORTHO05D008218 1.1e-51 208.0 260 50.4
Medtr3g107530 Medicago truncatula HOM05D006924 ORTHO05D008218 1.5e-51 207.6 258 50.8
Thhalv10013990m.g Eutrema salsugineum HOM05D006924 ORTHO05D008218 2.5e-51 206.8 250 51.6
Gohir.A08G236600 Gossypium hirsutum HOM05D006924 ORTHO05D008218 2.5e-51 206.8 260 51.2
EL10Ac2g02609 Beta vulgaris HOM05D006924 ORTHO05D008218 7.3e-51 205.3 271 47.2
arahy.Tifrunner.gnm1.ann1.SMV5T8 Arachis hypogaea HOM05D006924 ORTHO05D008218 9.6e-51 204.9 267 49.1
Eucgr.C02804 Eucalyptus grandis HOM05D006924 ORTHO05D008218 9.6e-51 204.9 268 46.3
Sed0001141 Sechium edule HOM05D006924 ORTHO05D008218 9.6e-51 204.9 309 49.8
BolC9t59383H Brassica oleracea HOM05D006924 ORTHO05D008218 1.2e-50 204.5 252 52.4
arahy.Tifrunner.gnm1.ann1.748QI4 Arachis hypogaea HOM05D006924 ORTHO05D008218 6.2e-50 202.2 261 48.7
MD08G1147000 Malus domestica HOM05D006924 ORTHO05D008218 8.1e-50 201.8 271 48.3
RcHm_v2.0_Chr6g0298241 Rosa chinensis HOM05D006924 ORTHO05D008218 8.1e-50 201.8 281 47.3
CANSAT21G2575 Cannabis sativa HOM05D006924 ORTHO05D008218 4.0e-49 199.5 262 50.4
TPR.G31774 Trifolium pratense HOM05D006924 ORTHO05D008218 2.0e-48 197.2 231 50.6
SalBow1G5089 Salvia bowleyana HOM05D006924 ORTHO05D008218 3.8e-47 193.0 143 67.8
Zm00001eb385620 Zea mays HOM05D006924 ORTHO05D008218 3.8e-47 193.0 249 49.0
CiPaw.08G012700 Carya illinoinensis HOM05D006924 ORTHO05D008218 3.5e-45 186.4 283 52.7
Prupe.1G478200 Prunus persica HOM05D006924 ORTHO05D008218 4.6e-45 186.0 172 58.7
Os06g0601000 Oryza sativa ssp. japonica HOM05D006924 ORTHO05D008218 3.0e-44 183.3 251 48.2
ATR0564G047 Amborella trichopoda HOM05D006924 ORTHO05D008218 3.9e-44 183.0 265 46.0
MBI04_g07630_MAGBIO Magnolia biondii HOM05D006924 ORTHO05D008218 6.6e-44 182.2 351 45.6
FAN15G1620 Fragaria x ananassa HOM05D006924 ORTHO05D008218 1.1e-43 181.4 246 48.4
Atru.chr7.2389 Acer truncatum HOM05D006924 ORTHO05D008218 1.5e-40 171.0 336 41.7
HPP92_003651 Vanilla planifolia HOM05D000347 ORTHO05D001997 1.7e-39 167.5 172 54.7
AUR62024897 Chenopodium quinoa HOM05D006924 ORTHO05D008218 3.8e-39 166.4 270 41.5
Lj7C719T2 Lonicera japonica HOM05D006924 ORTHO05D008218 2.1e-37 160.6 227 48.0
TAR626G1567 Trochodendron aralioides HOM05D006924 ORTHO05D008218 2.1e-37 160.6 144 61.8
Haze_21546 Corylus avellana HOM05D006924 ORTHO05D008218 2.3e-36 157.1 259 45.9
CSS0004992 Camellia sinensis var. sinensis HOM05D006924 ORTHO05D008218 3.6e-34 149.8 117 66.7
PGR044G1352 Punica granatum HOM05D006924 ORTHO05D008218 3.6e-34 149.8 231 45.9
Pp3c19_15790 Physcomitrium patens HOM05D006924 ORTHO05D008218 7.1e-30 135.6 276 38.0
Mapoly0029s0145 Marchantia polymorpha HOM05D006924 ORTHO05D008218 1.5e-27 127.9 262 39.3
AUR62030642 Chenopodium quinoa HOM05D006924 ORTHO05D008218 4.6e-21 106.3 273 33.0
Atru.chr7.2280 Acer truncatum HOM05D006924 ORTHO05D008218 7.4e-19 99.0 113 50.4
SEGI_32810 Sequoiadendron giganteum HOM05D006924 ORTHO05D008218 1.4e-14 84.7 234 34.6
Atru.chr10.503 Acer truncatum HOM05D006924 ORTHO05D008218 5.5e-14 82.8 267 31.8
Haze_21544 Corylus avellana HOM05D006924 ORTHO05D008218 7.2e-14 82.4 51 76.5
AagrBONN_evm.TU.Sc2ySwM_368.1808 Anthoceros agrestis HOM05D006924 ORTHO05D008218 3.9e-12 76.6 137 38.7
TPR.G28713 Trifolium pratense HOM05D006924 ORTHO05D008218 3.3e-11 73.6 42 73.8
Nn2g11969 Nelumbo nucifera HOM05D006924 ORTHO05D008218 5.7e-11 72.8 177 35.6
SMO367G1066 Selaginella moellendorffii HOM05D024584 ORTHO05D008218 1.6e-10 71.2 99 37.4
Hma1.2p1_0000F.1_g000370 Hydrangea macrophylla HOM05D006924 ORTHO05D008218 1.7e-07 61.2 134 50.0
Atru.chr1.1063 Acer truncatum HOM05D006924 ORTHO05D008218 3.8e-07 60.1 84 47.6


User provided reference genes

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