Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G588.93 Capsicum annuum HOM05D005442 ORTHO05D006450 1.7e-97 359.4 184 100.0
PGSC0003DMG400006166 Solanum tuberosum HOM05D005442 ORTHO05D006450 2.1e-63 246.1 174 73.6
Solyc01g111720.4 Solanum lycopersicum HOM05D005442 ORTHO05D006450 1.7e-62 243.0 174 73.6
Sopen01g053760 Solanum pennellii HOM05D005442 ORTHO05D006450 1.7e-62 243.0 174 73.6
Peaxi162Scf00362g00530 Petunia axillaris HOM05D005442 ORTHO05D006450 4.6e-47 191.8 174 62.6
Dinv41924 Davidia involucrata HOM05D005442 ORTHO05D006450 1.9e-37 159.8 174 51.7
CSS0044298 Camellia sinensis var. sinensis HOM05D005442 ORTHO05D006450 7.4e-37 157.9 176 52.8
Actinidia39159 Actinidia chinensis HOM05D005442 ORTHO05D006450 1.1e-35 154.1 176 51.7
Lj5A177G53 Lonicera japonica HOM05D005442 ORTHO05D006450 4.5e-34 148.7 172 51.7
Actinidia21468 Actinidia chinensis HOM05D005442 ORTHO05D006450 1.4e-32 143.7 176 49.4
vmacro17319 Vaccinium macrocarpon HOM05D005442 ORTHO05D006450 7.2e-32 141.4 175 49.1
DCAR_011887 Daucus carota HOM05D005442 ORTHO05D006450 1.2e-31 140.6 174 47.7
ClCG02G012030 Citrullus lanatus HOM05D005442 ORTHO05D006450 2.1e-31 139.8 176 47.7
TWI31G1375 Tripterygium wilfordii HOM05D005442 ORTHO05D006450 2.7e-31 139.4 174 48.9
TAR376G0424 Trochodendron aralioides HOM05D005442 ORTHO05D006450 1.8e-30 136.7 174 48.9
TAR369G0572 Trochodendron aralioides HOM05D005442 ORTHO05D006450 5.1e-30 135.2 172 48.8
GSVIVG01023996001 Vitis vinifera HOM05D005442 ORTHO05D006450 1.5e-29 133.7 176 47.2
Ciclev10028168m.g Citrus clementina HOM05D005442 ORTHO05D006450 3.3e-29 132.5 177 48.0
Cc09_g09800 Coffea canephora HOM05D005442 ORTHO05D006450 3.3e-29 132.5 178 48.3
Eucgr.I01451 Eucalyptus grandis HOM05D005442 ORTHO05D006450 9.7e-29 131.0 172 44.2
Sed0001500 Sechium edule HOM05D005442 ORTHO05D006450 9.7e-29 131.0 173 46.2
Atru.chr5.3384 Acer truncatum HOM05D005442 ORTHO05D006450 1.3e-28 130.6 172 46.5
Oeu015514.1 Olea europaea HOM05D005442 ORTHO05D006450 4.8e-28 128.6 176 45.5
CsaV3_2G016200 Cucumis sativus L. HOM05D005442 ORTHO05D006450 8.2e-28 127.9 172 45.3
Actinidia32035 Actinidia chinensis HOM05D005442 ORTHO05D006450 4.1e-27 125.6 146 51.4
Sabra09G0106500 Salix brachista HOM05D005442 ORTHO05D006450 4.1e-27 125.6 174 46.0
Sc08g0002780 Simmondsia chinensis HOM05D005442 ORTHO05D006450 4.1e-27 125.6 177 45.2
MELO3C020828.2 Cucumis melo HOM05D005442 ORTHO05D006450 9.0e-27 124.4 173 45.1
Lsat_1_v5_gn_6_13820 Lactuca sativa HOM05D005442 ORTHO05D006450 1.2e-26 124.0 174 42.5
CiPaw.05G084400 Carya illinoinensis HOM05D005442 ORTHO05D006450 2.0e-26 123.2 174 44.3
Ca_03302_v3 Cicer arietinum L. HOM05D005442 ORTHO05D006450 2.0e-26 123.2 177 44.6
Manes.01G140900 Manihot esculenta HOM05D005442 ORTHO05D006450 2.6e-26 122.9 170 46.5
Duzib132G0277 Durio zibethinus HOM05D005442 ORTHO05D006450 3.8e-25 119.0 176 44.3
MD05G1123900 Malus domestica HOM05D005442 ORTHO05D006450 3.8e-25 119.0 175 47.4
CANSAT56G0103 Cannabis sativa HOM05D005442 ORTHO05D006450 1.1e-24 117.5 164 45.1
MSTRG.16924 Avicennia marina HOM05D005442 ORTHO05D006450 1.4e-24 117.1 178 44.4
Lj5g0013939 Lotus japonicus HOM05D005442 ORTHO05D006450 2.5e-24 116.3 174 41.4
RcHm_v2.0_Chr6g0278721 Rosa chinensis HOM05D005442 ORTHO05D006450 4.2e-24 115.5 166 47.0
QL11p051413 Quercus lobata HOM05D005442 ORTHO05D006450 5.5e-24 115.2 183 42.1
Gohir.A03G205700 Gossypium hirsutum HOM05D005442 ORTHO05D006450 2.7e-23 112.8 176 43.8
TWI79G1761 Tripterygium wilfordii HOM05D005442 ORTHO05D006450 2.7e-23 112.8 126 49.2
Haze_13370 Corylus avellana HOM05D005442 ORTHO05D006450 4.6e-23 112.1 162 45.7
Gorai.005G254900 Gossypium raimondii HOM05D005442 ORTHO05D006450 4.6e-23 112.1 176 43.8
AUR62013010 Chenopodium quinoa HOM05D005442 ORTHO05D006450 3.0e-22 109.4 179 39.7
Prupe.8G167900 Prunus persica HOM05D005442 ORTHO05D006450 3.9e-22 109.0 169 42.6
Thecc.02G056900 Theobroma cacao HOM05D005442 ORTHO05D006450 5.1e-22 108.6 173 40.5
FAN20G2789 Fragaria x ananassa HOM05D005442 ORTHO05D006450 6.7e-22 108.2 166 45.8
Gohir.D02G227000 Gossypium hirsutum HOM05D005442 ORTHO05D006450 6.7e-22 108.2 176 43.2
BcaB03g16428 Brassica carinata HOM05D005442 ORTHO05D006450 8.8e-22 107.8 175 42.9
Thhalv10022629m.g Eutrema salsugineum HOM05D005442 ORTHO05D006450 8.8e-22 107.8 175 42.3
Sp3g30220 Schrenkiella parvula HOM05D005442 ORTHO05D006450 8.8e-22 107.8 175 42.3
MBI11_g07617_MAGBIO Magnolia biondii HOM05D005442 ORTHO05D006450 1.1e-21 107.5 169 42.0
Hund06446 Selenicereus undatus HOM05D005442 ORTHO05D006450 1.1e-21 107.5 182 42.3
FvH4_2g15550 Fragaria vesca HOM05D005442 ORTHO05D006450 1.5e-21 107.1 179 43.0
Rhsim05G0053300 Rhododendron simsii HOM05D005442 ORTHO05D006450 1.5e-21 107.1 124 50.0
A07p04140 Brassica napus HOM05D005442 ORTHO05D006450 2.0e-21 106.7 175 42.3
BraA07t28205Z Brassica rapa HOM05D005442 ORTHO05D006450 2.0e-21 106.7 175 42.3
BcaC06g36199 Brassica carinata HOM05D005442 ORTHO05D006450 2.5e-21 106.3 180 43.3
C07p06570 Brassica napus HOM05D005442 ORTHO05D006450 2.5e-21 106.3 180 43.3
BolC7t41079H Brassica oleracea HOM05D005442 ORTHO05D006450 2.5e-21 106.3 180 43.3
FAN15G0807 Fragaria x ananassa HOM05D005442 ORTHO05D006450 2.5e-21 106.3 179 43.0
FAN24G2500 Fragaria x ananassa HOM05D005442 ORTHO05D006450 2.5e-21 106.3 179 42.5
Psat6g232320 Pisum sativum HOM05D005442 ORTHO05D006450 3.3e-21 105.9 180 40.0
ECA233G3196 Erigeron canadensis HOM05D005442 ORTHO05D006450 4.3e-21 105.5 175 39.4
SGA_v2.0_scaffold58G20356 Striga asiatica HOM05D002097 ORTHO05D002248 5.7e-21 105.1 167 42.5
Glyma.20G106900 Glycine max HOM05D005442 ORTHO05D006450 1.3e-20 104.0 176 40.3
PGR142G2067 Punica granatum HOM05D005442 ORTHO05D006450 1.3e-20 104.0 176 39.8
Migut.B00066 Erythranthe guttata HOM05D005442 ORTHO05D006450 1.7e-20 103.6 178 40.4
COL.COLO4_17367 Corchorus olitorius HOM05D005442 ORTHO05D006450 2.2e-20 103.2 170 42.4
FAN27G2972 Fragaria x ananassa HOM05D005442 ORTHO05D006450 2.2e-20 103.2 179 41.9
THA.LOC104807379 Tarenaya hassleriana HOM05D005442 ORTHO05D006450 1.1e-19 100.9 175 38.3
AUR62010020 Chenopodium quinoa HOM05D005442 ORTHO05D006450 1.4e-19 100.5 179 38.5
PSO541G1416 Papaver somniferum HOM05D005442 ORTHO05D006450 1.8e-19 100.1 115 49.6
CDE04G0468 Ceratophyllum demersum HOM05D005442 ORTHO05D000996 2.4e-19 99.8 155 43.9
CARHR033820 Cardamine hirsuta HOM05D005442 ORTHO05D006450 4.1e-19 99.0 177 39.5
unitig_744.g24278 Utricularia gibba HOM05D005442 ORTHO05D006450 4.1e-19 99.0 122 47.5
Medtr1g112820 Medicago truncatula HOM05D005442 ORTHO05D002291 5.3e-19 98.6 172 41.3
Lalb_Chr06g0163701 Lupinus albus HOM05D005442 ORTHO05D006450 6.9e-19 98.2 172 41.3
Phvul.007G018400 Phaseolus vulgaris HOM05D005442 ORTHO05D006450 9.1e-19 97.8 177 39.5
arahy.Tifrunner.gnm1.ann1.WUXL4S Arachis hypogaea HOM05D005442 ORTHO05D006450 1.5e-18 97.1 180 42.8
arahy.Tifrunner.gnm1.ann1.ZGQ44R Arachis hypogaea HOM05D005442 ORTHO05D006450 1.5e-18 97.1 180 42.8
CDE02G3112 Ceratophyllum demersum HOM05D005442 ORTHO05D006450 2.0e-18 96.7 112 51.8
Glyma.10G282700 Glycine max HOM05D005442 ORTHO05D006450 2.0e-18 96.7 165 39.4
AT1G34360 Arabidopsis thaliana HOM05D005442 ORTHO05D006450 1.0e-17 94.4 179 38.5
Aa31LG8G14120 Aethionema arabicum HOM05D005442 ORTHO05D006450 1.3e-17 94.0 178 42.1
Carub.0001s3251 Capsella rubella HOM05D005442 ORTHO05D006450 1.3e-17 94.0 182 40.7
PSO675G1865 Papaver somniferum HOM05D005442 ORTHO05D006450 1.3e-17 94.0 174 40.2
Cpa.g.sc20.103 Carica papaya HOM05D005442 ORTHO05D006450 1.7e-17 93.6 175 38.3
ATR0763G134 Amborella trichopoda HOM05D005442 ORTHO05D006450 2.2e-17 93.2 108 50.0
AL1G48920 Arabidopsis lyrata HOM05D005442 ORTHO05D006450 2.2e-17 93.2 176 38.6
Nn1g06499 Nelumbo nucifera HOM05D005442 ORTHO05D006450 5.0e-17 92.0 101 53.5
HPP92_022198 Vanilla planifolia HOM05D005442 ORTHO05D006450 1.9e-16 90.1 179 35.8
Ah.01g023170 Amaranthus hybridus HOM05D005442 ORTHO05D006450 3.2e-16 89.4 183 40.4
arahy.Tifrunner.gnm1.ann1.U87P2U Arachis hypogaea HOM05D005442 ORTHO05D006450 5.5e-16 88.6 156 42.9
HPP92_022180 Vanilla planifolia HOM05D005442 ORTHO05D006450 7.2e-16 88.2 181 35.9
TPR.G2470 Trifolium pratense HOM05D005442 ORTHO05D006450 2.1e-15 86.7 182 37.9
Zm00001eb134390 Zea mays HOM05D005442 ORTHO05D006450 2.7e-15 86.3 124 41.9
SalBow1G0486 Salvia bowleyana HOM05D005442 ORTHO05D006450 3.6e-15 85.9 182 36.8
C03p57670 Brassica napus HOM05D005442 ORTHO05D006450 1.4e-14 84.0 108 47.2
EL10Ac9g21351 Beta vulgaris HOM05D005442 ORTHO05D006450 1.8e-14 83.6 113 47.8
BolC3t18042H Brassica oleracea HOM05D005442 ORTHO05D013811 1.1e-13 80.9 107 45.8
Os02g0101100 Oryza sativa ssp. japonica HOM05D005442 ORTHO05D006450 1.5e-13 80.5 95 44.2
BcaC01g02969 Brassica carinata HOM05D005442 ORTHO05D006450 7.4e-13 78.2 108 44.4
Aqoxy6G02079 Aquilegia oxysepala HOM05D005442 ORTHO05D006450 4.8e-12 75.5 181 30.4
C03p57690 Brassica napus HOM05D005442 ORTHO05D013811 1.2e-10 70.9 104 45.2
Mapoly0037s0141 Marchantia polymorpha HOM05D005442 ORTHO05D006450 2.9e-09 66.2 93 38.7
Rhsim09G0155200 Rhododendron simsii HOM05D005442 ORTHO05D006450 1.5e-08 63.9 78 47.4
SMO171G0119 Selaginella moellendorffii HOM05D005442 ORTHO05D006450 2.1e-07 60.1 79 43.0
Pp3c14_5800 Physcomitrium patens HOM05D004690 ORTHO05D005527 2.7e-07 59.7 98 39.8
Pp3c16_14950 Physcomitrium patens HOM05D005442 ORTHO05D006450 4.7e-07 58.9 93 38.7
C03p57650 Brassica napus HOM05D005442 ORTHO05D006450 1.4e-06 57.4 51 54.9
BolC3t18039H Brassica oleracea HOM05D005442 ORTHO05D006450 1.4e-06 57.4 51 54.9
AagrBONN_evm.TU.Sc2ySwM_344.3952 Anthoceros agrestis HOM05D005442 ORTHO05D006450 1.8e-06 57.0 121 34.7
Lsat_1_v5_gn_1_105560 Lactuca sativa HOM05D003178 ORTHO05D003636 3.0e-06 56.2 80 37.5
CBR_g29438 Chara braunii HOM05D005442 ORTHO05D006450 4.0e-06 55.8 111 35.1
Mapoly0090s0068 Marchantia polymorpha HOM05D004690 ORTHO05D005527 4.0e-06 55.8 102 34.3
Pp3c2_19940 Physcomitrium patens HOM05D004690 ORTHO05D005527 4.0e-06 55.8 105 35.2
Pp3c27_2790 Physcomitrium patens HOM05D005442 ORTHO05D006450 5.2e-06 55.5 116 35.3
HPP92_028071 Vanilla planifolia HOM05D005442 ORTHO05D006450 6.7e-06 55.1 98 38.8


User provided reference genes

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