Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G564.3 Capsicum annuum HOM05D000439 ORTHO05D006154 3.9e-108 394.8 201 100.0
PGSC0003DMG400031150 Solanum tuberosum HOM05D000439 ORTHO05D006154 1.1e-57 227.3 280 47.9
Nitab4.5_0001000g0080 Nicotiana tabacum HOM05D000439 ORTHO05D006154 5.2e-52 208.4 272 45.6
Nitab4.5_0000433g0090 Nicotiana tabacum HOM05D000439 ORTHO05D006154 4.4e-51 205.3 271 46.1
Nitab4.5_0001000g0070 Nicotiana tabacum HOM05D000439 ORTHO05D006154 1.1e-33 147.5 264 36.7
Nitab4.5_0000433g0080 Nicotiana tabacum HOM05D000439 ORTHO05D006154 1.9e-33 146.7 264 36.7
Peaxi162Scf00091g00516 Petunia axillaris HOM05D000439 ORTHO05D006154 1.3e-31 140.6 280 32.9
Nitab4.5_0012621g0010 Nicotiana tabacum HOM05D000439 ORTHO05D006154 4.7e-29 132.1 271 32.1
CAN.G1008.30 Capsicum annuum HOM05D000439 ORTHO05D006154 4.0e-28 129.0 271 32.5
CAN.G1008.29 Capsicum annuum HOM05D000439 ORTHO05D006154 5.2e-28 128.6 166 42.2
Peaxi162Scf00091g00051 Petunia axillaris HOM05D000439 ORTHO05D006154 8.9e-28 127.9 167 40.7
Sopen06g030920 Solanum pennellii HOM05D000439 ORTHO05D006154 4.9e-26 122.1 179 35.8
Nitab4.5_0000976g0310 Nicotiana tabacum HOM05D000439 ORTHO05D006154 5.4e-25 118.6 273 31.5
CAN.G564.8 Capsicum annuum HOM05D000439 ORTHO05D006154 7.1e-25 118.2 165 40.0
Nitab4.5_0001216g0050 Nicotiana tabacum HOM05D000439 ORTHO05D006154 7.1e-25 118.2 262 31.7
PGSC0003DMG400044295 Solanum tuberosum HOM05D000439 ORTHO05D006154 9.2e-25 117.9 177 33.9
Sopen03g036820 Solanum pennellii HOM05D000439 ORTHO05D006154 1.2e-24 117.5 167 43.1
Solyc06g074450.3 Solanum lycopersicum HOM05D000439 ORTHO05D006154 6.0e-24 115.2 177 34.5
PGSC0003DMG400031151 Solanum tuberosum HOM05D000439 ORTHO05D006154 6.0e-24 115.2 268 29.9
Dinv23249 Davidia involucrata HOM05D000439 ORTHO05D006154 3.9e-23 112.5 167 38.3
Sopen03g036830 Solanum pennellii HOM05D000439 ORTHO05D006154 1.1e-22 110.9 279 29.0
Sopen04g028360 Solanum pennellii HOM05D000439 ORTHO05D006154 1.5e-22 110.5 268 29.1
Actinidia36853 Actinidia chinensis HOM05D000439 ORTHO05D006154 1.9e-22 110.2 165 37.0
CAN.G919.14 Capsicum annuum HOM05D000439 ORTHO05D006154 2.5e-22 109.8 175 35.4
Actinidia08922 Actinidia chinensis HOM05D000439 ORTHO05D006154 9.6e-22 107.8 165 35.8
Solyc04g072200.3 Solanum lycopersicum HOM05D000439 ORTHO05D006154 9.6e-22 107.8 154 37.7
CAN.G1008.33 Capsicum annuum HOM05D000439 ORTHO05D006154 2.8e-21 106.3 276 27.5
Solyc03g117930.4 Solanum lycopersicum HOM05D000439 ORTHO05D006154 2.8e-21 106.3 279 28.7
Nitab4.5_0002540g0130 Nicotiana tabacum HOM05D000439 ORTHO05D006154 6.2e-21 105.1 167 37.1
PGSC0003DMG400014443 Solanum tuberosum HOM05D000439 ORTHO05D006154 1.4e-20 104.0 167 36.5
CAN.G47.4 Capsicum annuum HOM05D000439 ORTHO05D006154 3.1e-20 102.8 167 35.9
Nitab4.5_0004781g0040 Nicotiana tabacum HOM05D000439 ORTHO05D006154 4.0e-20 102.4 167 37.7
Peaxi162Scf00091g00412 Petunia axillaris HOM05D000439 ORTHO05D006154 5.3e-20 102.1 271 29.5
Psat5g056000 Pisum sativum HOM05D000439 ORTHO05D006154 5.3e-20 102.1 154 39.0
Dinv13691 Davidia involucrata HOM05D000439 ORTHO05D006154 9.0e-20 101.3 167 35.9
Migut.I00648 Erythranthe guttata HOM05D000439 ORTHO05D006154 9.0e-20 101.3 165 35.8
CSS0035359 Camellia sinensis var. sinensis HOM05D000439 ORTHO05D006154 1.2e-19 100.9 165 35.2
Nitab4.5_0007669g0030 Nicotiana tabacum HOM05D000439 ORTHO05D006154 1.2e-19 100.9 238 30.7
Solyc12g042440.2 Solanum lycopersicum HOM05D000439 ORTHO05D006154 1.2e-19 100.9 167 35.9
Sopen12g021430 Solanum pennellii HOM05D000439 ORTHO05D006154 2.0e-19 100.1 167 35.3
Phvul.009G159400 Phaseolus vulgaris HOM05D000439 ORTHO05D006154 2.6e-19 99.8 169 34.3
QL10p000140 Quercus lobata HOM05D000439 ORTHO05D006154 3.4e-19 99.4 272 28.3
arahy.Tifrunner.gnm1.ann1.94UTWG Arachis hypogaea HOM05D000439 ORTHO05D006154 5.8e-19 98.6 167 32.3
Rhsim08G0200600 Rhododendron simsii HOM05D000439 ORTHO05D006154 5.8e-19 98.6 165 33.9
TWI23G1133 Tripterygium wilfordii HOM05D000439 ORTHO05D006154 5.8e-19 98.6 274 26.3
Peaxi162Scf00314g00840 Petunia axillaris HOM05D000439 ORTHO05D006154 7.6e-19 98.2 172 35.5
Ca_17046_v3 Cicer arietinum L. HOM05D000422 ORTHO05D001248 2.9e-18 96.3 278 25.2
VMungo1309G2046 Vigna mungo HOM05D000439 ORTHO05D006154 3.8e-18 95.9 171 34.5
Glyma.06G162100 Glycine max HOM05D000439 ORTHO05D006154 4.9e-18 95.5 172 33.1
Lj1g0000423 Lotus japonicus HOM05D000439 ORTHO05D006154 4.9e-18 95.5 179 31.3
Nn3g16172 Nelumbo nucifera HOM05D000439 ORTHO05D006154 1.1e-17 94.4 154 31.8
TWI14G1070 Tripterygium wilfordii HOM05D000439 ORTHO05D006154 1.9e-17 93.6 166 33.1
Aa31LG3G7580 Aethionema arabicum HOM05D000439 ORTHO05D006154 3.2e-17 92.8 166 33.1
Duzib084G0576 Durio zibethinus HOM05D000439 ORTHO05D006154 3.2e-17 92.8 172 32.6
TAR374G1365 Trochodendron aralioides HOM05D000439 ORTHO05D006154 4.2e-17 92.4 272 25.4
CsaV3_4G029810 Cucumis sativus L. HOM05D000439 ORTHO05D006154 2.1e-16 90.1 161 32.3
MELO3C003262.2 Cucumis melo HOM05D000439 ORTHO05D006154 6.0e-16 88.6 280 24.6
DCAR_025619 Daucus carota HOM05D000439 ORTHO05D006154 6.0e-16 88.6 182 28.6
Eucgr.H00244 Eucalyptus grandis HOM05D000439 ORTHO05D006154 6.0e-16 88.6 154 33.1
Medtr3g098290 Medicago truncatula HOM05D000439 ORTHO05D006154 6.0e-16 88.6 167 34.1
Rhsim12G0182700 Rhododendron simsii HOM05D000439 ORTHO05D006154 7.8e-16 88.2 162 31.5
ECA246G4312 Erigeron canadensis HOM05D007610 ORTHO05D009592 1.0e-15 87.8 183 31.7
Lalb_Chr23g0272801 Lupinus albus HOM05D000439 ORTHO05D006154 1.7e-15 87.0 167 31.1
Duzib205G0088 Durio zibethinus HOM05D000439 ORTHO05D006154 2.3e-15 86.7 279 25.8
Gohir.A03G055200 Gossypium hirsutum HOM05D000439 ORTHO05D006154 3.0e-15 86.3 279 26.5
Thecc.03G143900 Theobroma cacao HOM05D000439 ORTHO05D006154 3.0e-15 86.3 279 25.4
arahy.Tifrunner.gnm1.ann1.R8UNTY Arachis hypogaea HOM05D000439 ORTHO05D006154 3.9e-15 85.9 189 28.6
ECA246G1416 Erigeron canadensis HOM05D000439 ORTHO05D006154 3.9e-15 85.9 153 32.0
Atru.chr6.1963 Acer truncatum HOM05D000439 ORTHO05D006154 5.1e-15 85.5 165 32.1
CAN.G919.28 Capsicum annuum HOM05D000439 ORTHO05D006154 5.1e-15 85.5 126 40.5
Lalb_Chr11g0068951 Lupinus albus HOM05D000439 ORTHO05D006154 5.1e-15 85.5 169 32.0
Gohir.D03G111600 Gossypium hirsutum HOM05D000439 ORTHO05D006154 6.6e-15 85.1 279 26.2
Gorai.003G118000 Gossypium raimondii HOM05D000439 ORTHO05D006154 6.6e-15 85.1 279 26.2
Manes.06G128900 Manihot esculenta HOM05D000439 ORTHO05D006154 6.6e-15 85.1 165 29.7
TPR.G7812 Trifolium pratense HOM05D000439 ORTHO05D006154 1.5e-14 84.0 278 25.9
ECA246G3042 Erigeron canadensis HOM05D000439 ORTHO05D006154 1.9e-14 83.6 153 33.3
Gorai.001G052900 Gossypium raimondii HOM05D000439 ORTHO05D006154 1.9e-14 83.6 274 24.8
Gohir.A07G045400 Gossypium hirsutum HOM05D000439 ORTHO05D006154 2.5e-14 83.2 276 25.0
Nitab4.5_0000976g0300 Nicotiana tabacum HOM05D000439 ORTHO05D006154 5.6e-14 82.0 122 36.1
AL8G25340 Arabidopsis lyrata HOM05D000439 ORTHO05D006154 1.3e-13 80.9 165 27.9
Manes.14G042300 Manihot esculenta HOM05D000439 ORTHO05D006154 1.3e-13 80.9 274 24.1
Thhalv10012996m.g Eutrema salsugineum HOM05D000439 ORTHO05D006154 2.1e-13 80.1 155 27.7
BcaC01g06069 Brassica carinata HOM05D000439 ORTHO05D006154 3.6e-13 79.3 154 27.9
BolC3t14311H Brassica oleracea HOM05D000439 ORTHO05D006154 8.1e-13 78.2 154 27.3
CARHR257000 Cardamine hirsuta HOM05D000439 ORTHO05D006154 8.1e-13 78.2 154 27.9
Peaxi162Scf00091g00413 Petunia axillaris HOM05D000439 ORTHO05D006154 1.1e-12 77.8 99 41.4
Sp6g13280 Schrenkiella parvula HOM05D000439 ORTHO05D006154 1.1e-12 77.8 154 28.6
BcaC01g06107 Brassica carinata HOM05D000439 ORTHO05D006154 1.4e-12 77.4 154 26.0
C03p19250 Brassica napus HOM05D000439 ORTHO05D006154 1.8e-12 77.0 154 27.3
HanXRQChr05g0154491 Helianthus annuus HOM05D000439 ORTHO05D006154 4.0e-12 75.9 155 33.5
Aqoxy5G03342 Aquilegia oxysepala HOM05D000439 ORTHO05D006154 6.9e-12 75.1 154 29.9
BraA03t10927Z Brassica rapa HOM05D000439 ORTHO05D006154 6.9e-12 75.1 154 27.3
ClCG04G003180 Citrullus lanatus HOM05D000439 ORTHO05D006154 6.9e-12 75.1 345 21.7
COL.COLO4_37292 Corchorus olitorius HOM05D000439 ORTHO05D006154 6.9e-12 75.1 315 22.9
HanXRQChr05g0157581 Helianthus annuus HOM05D000439 ORTHO05D006154 6.9e-12 75.1 155 31.6
THA.LOC104808041 Tarenaya hassleriana HOM05D000439 ORTHO05D006154 6.9e-12 75.1 156 30.8
BcaB08g35465 Brassica carinata HOM05D000439 ORTHO05D006154 1.2e-11 74.3 154 27.9
A03p16370 Brassica napus HOM05D000439 ORTHO05D006154 1.2e-11 74.3 154 27.3
Lsat_1_v5_gn_5_9321 Lactuca sativa HOM05D000439 ORTHO05D006154 2.6e-11 73.2 156 29.5
BcaC04g20734 Brassica carinata HOM05D000439 ORTHO05D006154 3.4e-11 72.8 154 27.3
C09p39760 Brassica napus HOM05D000439 ORTHO05D006154 3.4e-11 72.8 154 27.3
BolC9t56878H Brassica oleracea HOM05D000439 ORTHO05D006154 3.4e-11 72.8 154 27.3
Solyc03g117920.1 Solanum lycopersicum HOM05D000439 ORTHO05D006154 7.6e-11 71.6 105 41.0
BraSC35t45999Z Brassica rapa HOM05D000439 ORTHO05D006154 9.9e-11 71.2 154 26.0
VMungo1309G0148 Vigna mungo HOM05D000439 ORTHO05D006154 9.9e-11 71.2 109 37.6
A10p08000 Brassica napus HOM05D000439 ORTHO05D006154 1.3e-10 70.9 154 26.0
MBI07_g11053_MAGBIO Magnolia biondii HOM05D000439 ORTHO05D006154 1.7e-10 70.5 154 27.9
unitig_61.g26220 Utricularia gibba HOM05D000439 ORTHO05D006154 3.8e-10 69.3 129 26.4
SGA_v2.0_scaffold5G02819 Striga asiatica HOM05D000439 ORTHO05D006154 1.4e-09 67.4 331 21.1
Gohir.D07G049801 Gossypium hirsutum HOM05D000439 ORTHO05D006154 2.1e-08 63.5 131 29.0
PGSC0003DMG400034493 Solanum tuberosum HOM05D000439 ORTHO05D006154 4.6e-08 62.4 179 29.6
AagrBONN_evm.TU.Sc2ySwM_344.4515 Anthoceros agrestis HOM05D000439 ORTHO05D001363 1.1e-06 57.8 152 26.3
PSO541G3118 Papaver somniferum HOM05D000439 ORTHO05D001363 1.1e-06 57.8 152 27.0
Mapoly0043s0082 Marchantia polymorpha HOM05D000439 ORTHO05D001363 1.9e-06 57.0 152 25.7
PSO675G5826 Papaver somniferum HOM05D000439 ORTHO05D001363 1.9e-06 57.0 152 25.7
Ciclev10032109m.g Citrus clementina HOM05D000439 ORTHO05D006154 4.3e-06 55.8 98 32.7
Sabra15G0132200 Salix brachista HOM05D000439 ORTHO05D006154 4.3e-06 55.8 110 32.7
Cc04_g05540 Coffea canephora HOM05D000439 ORTHO05D006154 9.6e-06 54.7 43 62.8


User provided reference genes

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