Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G551.89 Capsicum annuum HOM05D005673 ORTHO05D007081 1.5e-144 516.2 257 100.0
Sopen12g004500 Solanum pennellii HOM05D005673 ORTHO05D007081 3.2e-131 471.9 257 91.4
Solyc12g009500.2 Solanum lycopersicum HOM05D005673 ORTHO05D007081 5.5e-131 471.1 257 91.1
PGSC0003DMG400002916 Solanum tuberosum HOM05D005673 ORTHO05D007081 8.8e-129 463.8 257 90.3
Nitab4.5_0000575g0020 Nicotiana tabacum HOM05D005673 ORTHO05D007081 5.0e-124 448.0 263 86.3
Nitab4.5_0002078g0030 Nicotiana tabacum HOM05D005673 ORTHO05D007081 4.7e-122 441.4 263 85.2
Actinidia38234 Actinidia chinensis HOM05D005673 ORTHO05D007081 1.7e-87 326.6 260 64.6
Lj1A928T62 Lonicera japonica HOM05D005673 ORTHO05D007081 2.4e-86 322.8 256 62.1
Lj1A926T37 Lonicera japonica HOM05D005673 ORTHO05D007081 7.0e-86 321.2 256 61.7
SalBow4G0159 Salvia bowleyana HOM05D005673 ORTHO05D007081 1.6e-85 320.1 251 61.4
Actinidia03012 Actinidia chinensis HOM05D005673 ORTHO05D007081 1.3e-84 317.0 260 62.7
CSS0045417 Camellia sinensis var. sinensis HOM05D005673 ORTHO05D007081 6.6e-84 314.7 262 63.0
QL08p057314 Quercus lobata HOM05D005673 ORTHO05D007081 6.6e-84 314.7 264 62.5
Lsat_1_v5_gn_8_21281 Lactuca sativa HOM05D005673 ORTHO05D007081 8.6e-84 314.3 265 60.0
ECA233G0150 Erigeron canadensis HOM05D005673 ORTHO05D007081 1.1e-83 313.9 249 62.2
HanXRQChr08g0219361 Helianthus annuus HOM05D005673 ORTHO05D007081 1.1e-83 313.9 258 58.5
CSS0019421 Camellia sinensis var. sinensis HOM05D005673 ORTHO05D007081 5.6e-83 311.6 262 62.2
Ciclev10032487m.g Citrus clementina HOM05D005673 ORTHO05D007081 2.1e-82 309.7 264 57.6
PSO384G5123 Papaver somniferum HOM05D005673 ORTHO05D007081 2.1e-82 309.7 253 60.1
PSO339G1442 Papaver somniferum HOM05D005673 ORTHO05D007081 8.1e-82 307.8 253 58.9
Peaxi162Scf00170g00413 Petunia axillaris HOM05D005673 ORTHO05D007081 6.8e-81 304.7 257 65.8
Thecc.10G064600 Theobroma cacao HOM05D005673 ORTHO05D007081 2.6e-80 302.8 260 58.5
Cc09_g02320 Coffea canephora HOM05D005673 ORTHO05D007081 3.4e-80 302.4 261 59.4
MSTRG.9191 Avicennia marina HOM05D005673 ORTHO05D007081 1.3e-79 300.4 259 57.5
Manes.07G105200 Manihot esculenta HOM05D005673 ORTHO05D007081 1.3e-79 300.4 262 56.5
MBI14_g17793_MAGBIO Magnolia biondii HOM05D005673 ORTHO05D007081 2.2e-79 299.7 236 61.4
GSVIVG01032643001 Vitis vinifera HOM05D005673 ORTHO05D007081 2.9e-79 299.3 261 59.8
CiPaw.02G177700 Carya illinoinensis HOM05D005673 ORTHO05D007081 4.9e-79 298.5 264 57.2
Hund22450 Selenicereus undatus HOM05D005673 ORTHO05D007081 6.4e-79 298.1 262 58.0
Aqoxy4G03141 Aquilegia oxysepala HOM05D005673 ORTHO05D007081 8.3e-79 297.7 263 57.8
RcHm_v2.0_Chr1g0364441 Rosa chinensis HOM05D005673 ORTHO05D007081 1.1e-78 297.4 253 59.3
COL.COLO4_08204 Corchorus olitorius HOM05D005673 ORTHO05D007081 1.9e-78 296.6 260 56.9
SGA_v2.0_scaffold62G21443 Striga asiatica HOM05D005673 ORTHO05D007081 9.2e-78 294.3 251 57.8
FAN10G0505 Fragaria x ananassa HOM05D005673 ORTHO05D007081 1.2e-77 293.9 253 60.1
Lalb_Chr19g0126251 Lupinus albus HOM05D005673 ORTHO05D007081 2.7e-77 292.7 260 55.0
FAN03G2886 Fragaria x ananassa HOM05D005673 ORTHO05D007081 3.5e-77 292.4 253 59.7
FvH4_7g20560 Fragaria vesca HOM05D005673 ORTHO05D007081 4.6e-77 292.0 253 59.7
FAN06G0951 Fragaria x ananassa HOM05D005673 ORTHO05D007081 4.6e-77 292.0 253 59.7
FAN06G2416 Fragaria x ananassa HOM05D005673 ORTHO05D007081 6.0e-77 291.6 253 59.7
Cfa001572 Carpinus fangiana HOM05D005673 ORTHO05D007081 7.8e-77 291.2 266 57.5
Sabra08G0032600 Salix brachista HOM05D005673 ORTHO05D007081 7.8e-77 291.2 263 55.1
AUR62036006 Chenopodium quinoa HOM05D005673 ORTHO05D007081 1.0e-76 290.8 262 57.3
Haze_16957 Corylus avellana HOM05D005673 ORTHO05D007081 1.0e-76 290.8 266 57.1
Duzib114G0197 Durio zibethinus HOM05D005673 ORTHO05D007081 1.0e-76 290.8 260 57.3
FAN01G1496 Fragaria x ananassa HOM05D005673 ORTHO05D007081 1.0e-76 290.8 253 59.3
FAN01G2008 Fragaria x ananassa HOM05D005673 ORTHO05D007081 1.0e-76 290.8 253 59.3
MD07G1182600 Malus domestica HOM05D005673 ORTHO05D007081 1.3e-76 290.4 253 59.3
Potri.008G046400 Populus trichocarpa HOM05D005673 ORTHO05D007081 1.7e-76 290.0 263 55.1
Gorai.010G203600 Gossypium raimondii HOM05D005673 ORTHO05D007081 2.3e-76 289.7 258 57.4
TWI38G1168 Tripterygium wilfordii HOM05D005673 ORTHO05D007081 3.0e-76 289.3 266 57.9
Gohir.D06G174000 Gossypium hirsutum HOM05D005673 ORTHO05D007081 6.6e-76 288.1 258 57.0
MD01G1114500 Malus domestica HOM05D005673 ORTHO05D007081 1.1e-75 287.3 253 58.5
CANSAT11G2273 Cannabis sativa HOM05D005673 ORTHO05D007081 1.5e-75 287.0 254 57.5
Rhsim03G0121300 Rhododendron simsii HOM05D005673 ORTHO05D007081 1.5e-75 287.0 229 65.5
THA.LOC104825722 Tarenaya hassleriana HOM05D005673 ORTHO05D007081 2.5e-75 286.2 266 56.8
EL10Ac2g03532 Beta vulgaris HOM05D005673 ORTHO05D007081 4.3e-75 285.4 261 56.7
arahy.Tifrunner.gnm1.ann1.R12QR1 Arachis hypogaea HOM05D005673 ORTHO05D007081 7.3e-75 284.6 265 53.2
TAR623G0755 Trochodendron aralioides HOM05D005673 ORTHO05D007081 1.2e-74 283.9 222 65.3
Gohir.A06G179004 Gossypium hirsutum HOM05D005673 ORTHO05D007081 1.6e-74 283.5 258 56.2
Lj1g0007847 Lotus japonicus HOM05D005673 ORTHO05D007081 1.6e-74 283.5 253 54.5
CsaV3_5G006400 Cucumis sativus L. HOM05D005673 ORTHO05D007081 8.1e-74 281.2 260 56.9
Sed0006326 Sechium edule HOM05D005673 ORTHO05D007081 1.1e-73 280.8 265 55.1
arahy.Tifrunner.gnm1.ann1.YNZN7C Arachis hypogaea HOM05D005673 ORTHO05D007081 4.0e-73 278.9 265 52.5
Carub.0006s2866 Capsella rubella HOM05D005673 ORTHO05D007081 6.8e-73 278.1 266 54.5
AL6G43874 Arabidopsis lyrata HOM05D005673 ORTHO05D007081 1.2e-72 277.3 265 54.3
ClCG02G013770 Citrullus lanatus HOM05D005673 ORTHO05D007081 1.5e-72 276.9 267 56.2
AT4G10090 Arabidopsis thaliana HOM05D005673 ORTHO05D007081 2.6e-72 276.2 265 54.3
MELO3C011718.2 Cucumis melo HOM05D005673 ORTHO05D007081 2.6e-72 276.2 263 55.5
Migut.F02013 Erythranthe guttata HOM05D005673 ORTHO05D007081 2.6e-72 276.2 237 59.9
PGR142G2170 Punica granatum HOM05D005673 ORTHO05D007081 7.6e-72 274.6 256 52.7
Ah.16g108000 Amaranthus hybridus HOM05D005673 ORTHO05D007081 2.2e-71 273.1 269 53.9
A09p28870 Brassica napus HOM05D005673 ORTHO05D007081 2.9e-71 272.7 259 54.4
BcaC04g21010 Brassica carinata HOM05D005673 ORTHO05D007081 6.4e-71 271.6 259 53.7
C09p36690 Brassica napus HOM05D005673 ORTHO05D007081 6.4e-71 271.6 259 53.7
BolC9t56500H Brassica oleracea HOM05D005673 ORTHO05D007081 6.4e-71 271.6 259 53.7
Oeu008278.1 Olea europaea HOM05D005673 ORTHO05D007081 8.4e-71 271.2 221 62.9
Cfa005598 Carpinus fangiana HOM05D005673 ORTHO05D007081 1.4e-70 270.4 264 53.0
Ca_07421_v3 Cicer arietinum L. HOM05D005673 ORTHO05D007081 1.9e-70 270.0 257 51.8
vmacro07099 Vaccinium macrocarpon HOM05D005673 ORTHO05D007081 2.4e-70 269.6 225 61.8
Glyma.08G340700 Glycine max HOM05D005673 ORTHO05D007081 3.2e-70 269.2 263 49.8
Thhalv10028887m.g Eutrema salsugineum HOM05D005673 ORTHO05D007081 4.1e-70 268.9 262 53.4
BcaB01g01447 Brassica carinata HOM05D005673 ORTHO05D007081 9.2e-70 267.7 268 52.2
DCAR_015256 Daucus carota HOM05D005673 ORTHO05D007081 1.2e-69 267.3 308 47.7
CARHR261110 Cardamine hirsuta HOM05D005673 ORTHO05D007081 2.7e-69 266.2 265 53.6
Eucgr.G02786 Eucalyptus grandis HOM05D005673 ORTHO05D007081 4.6e-69 265.4 259 52.5
Sp6g07430 Schrenkiella parvula HOM05D005673 ORTHO05D007081 1.3e-68 263.8 265 51.7
TPR.G10191 Trifolium pratense HOM05D005673 ORTHO05D007081 3.0e-68 262.7 257 51.0
Aa31LG9G11910 Aethionema arabicum HOM05D005673 ORTHO05D007081 3.9e-68 262.3 266 53.0
Phvul.008G138600 Phaseolus vulgaris HOM05D005673 ORTHO05D007081 5.1e-68 261.9 265 49.4
HPP92_012063 Vanilla planifolia HOM05D005673 ORTHO05D007081 1.1e-67 260.8 267 51.3
CDE04G2944 Ceratophyllum demersum HOM05D005673 ORTHO05D007081 9.6e-67 257.7 251 50.6
Prupe.2G221200 Prunus persica HOM05D005673 ORTHO05D007081 8.9e-65 251.1 213 59.6
Sc20g0002250 Simmondsia chinensis HOM05D005673 ORTHO05D007081 1.3e-63 247.3 224 55.4
Zm00001eb378810 Zea mays HOM05D005673 ORTHO05D007081 2.9e-63 246.1 246 51.6
Atru.BG.271.p Acer truncatum HOM05D005673 ORTHO05D007081 1.2e-61 240.7 234 53.0
Os03g0284000 Oryza sativa ssp. japonica HOM05D005673 ORTHO05D007081 2.7e-61 239.6 249 49.8
AUR62041616 Chenopodium quinoa HOM05D005673 ORTHO05D007081 1.3e-58 230.7 260 47.7
Nn2g10602 Nelumbo nucifera HOM05D005673 ORTHO05D007081 8.1e-58 228.0 190 61.1
Dinv25934 Davidia involucrata HOM05D005673 ORTHO05D007081 4.5e-56 222.2 164 68.9
Atru.chr12.608 Acer truncatum HOM05D005673 ORTHO05D007081 1.8e-49 200.3 166 60.8
Hma1.2p1_0348F.1_g131860 Hydrangea macrophylla HOM05D005673 ORTHO05D007081 1.9e-46 190.3 153 62.1
SGA_v2.0_scaffold17G08196 Striga asiatica HOM05D005673 ORTHO05D007081 9.3e-46 188.0 151 59.6
MD00G1166800 Malus domestica HOM05D005673 ORTHO05D007081 4.0e-41 172.6 189 48.7
Mapoly0003s0199 Marchantia polymorpha HOM05D005673 ORTHO05D007081 4.0e-41 172.6 251 40.6
Medtr7g047440 Medicago truncatula HOM05D005673 ORTHO05D007081 2.0e-40 170.2 159 50.3
Medtr7g451610 Medicago truncatula HOM05D005673 ORTHO05D007081 2.0e-40 170.2 159 50.3
Medtr7g451710 Medicago truncatula HOM05D005673 ORTHO05D007081 2.0e-40 170.2 159 50.3
VMungo1383G1385 Vigna mungo HOM05D005673 ORTHO05D007081 8.4e-39 164.9 149 49.7
Pp3c2_31740 Physcomitrium patens HOM05D005673 ORTHO05D007081 2.5e-35 153.3 277 36.8
HPP92_012075 Vanilla planifolia HOM05D005673 ORTHO05D007081 6.3e-34 148.7 153 51.0
unitig_37.g12298 Utricularia gibba HOM05D005673 ORTHO05D007081 2.4e-33 146.7 124 56.5
Psat0s9937g0040 Pisum sativum HOM05D005673 ORTHO05D007081 9.0e-33 144.8 110 63.6
SMO347G0616 Selaginella moellendorffii HOM05D005673 ORTHO05D007081 7.6e-32 141.7 208 40.9
AagrBONN_evm.TU.Sc2ySwM_362.1467 Anthoceros agrestis HOM05D005673 ORTHO05D007081 5.0e-31 139.0 253 35.6
Psat3g152960 Pisum sativum HOM05D005673 ORTHO05D007081 5.5e-30 135.6 115 54.8
PSO713G0026 Papaver somniferum HOM05D005673 ORTHO05D007081 9.7e-27 124.8 160 41.9
Aqoxy4G03136 Aquilegia oxysepala HOM05D005673 ORTHO05D007081 2.0e-24 117.1 165 46.1
unitig_37.g12299 Utricularia gibba HOM05D005673 ORTHO05D007081 1.6e-21 107.5 88 55.7
Psat3g152920 Pisum sativum HOM05D005673 ORTHO05D007081 7.9e-21 105.1 99 51.5
Psat3g153040 Pisum sativum HOM05D005673 ORTHO05D007081 3.9e-20 102.8 107 51.4
HanXRQChr02g0043631 Helianthus annuus HOM05D005673 ORTHO05D007081 5.1e-20 102.4 95 53.7
Hma1.2p1_0348F.1_g131840 Hydrangea macrophylla HOM05D005673 ORTHO05D007081 3.4e-16 89.7 82 58.5
VMungo1383G3547 Vigna mungo HOM05D005673 ORTHO05D007081 6.5e-15 85.5 80 51.2
CBR_g23354 Chara braunii HOM05D005673 ORTHO05D007081 8.5e-15 85.1 207 33.8
Cpa.g.c44350 Carica papaya HOM05D005673 ORTHO05D007081 3.2e-14 83.2 72 55.6
Medtr7g050450 Medicago truncatula HOM05D005673 ORTHO05D007081 1.8e-12 77.4 87 44.8
HanXRQChr13g0394111 Helianthus annuus HOM05D005673 ORTHO05D007081 5.2e-12 75.9 91 42.9
BcaB04g18418 Brassica carinata HOM05D005673 ORTHO05D007081 5.7e-11 72.4 92 42.4
Cpa.g.sc5360.1 Carica papaya HOM05D005673 ORTHO05D007081 2.2e-10 70.5 48 68.8


User provided reference genes

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