Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G534.24 Capsicum annuum HOM05D000208 ORTHO05D022181 5.6e-44 180.6 97 100.0
CAN.G534.2 Capsicum annuum HOM05D000208 ORTHO05D022181 3.1e-42 174.9 96 96.9
CAN.G862.55 Capsicum annuum HOM05D000208 ORTHO05D000130 2.1e-19 99.0 67 79.1
Nitab4.5_0006391g0020 Nicotiana tabacum HOM05D000208 ORTHO05D000130 2.1e-19 99.0 67 79.1
Nitab4.5_0002898g0030 Nicotiana tabacum HOM05D000208 ORTHO05D000130 2.8e-19 98.6 68 77.9
Solyc03g122340.3 Solanum lycopersicum HOM05D000208 ORTHO05D000130 3.7e-19 98.2 67 77.6
Peaxi162Scf00038g02025 Petunia axillaris HOM05D000208 ORTHO05D000130 6.2e-19 97.4 67 77.6
Sopen03g041110 Solanum pennellii HOM05D000208 ORTHO05D000130 6.2e-19 97.4 67 77.6
PGSC0003DMG400022894 Solanum tuberosum HOM05D000208 ORTHO05D000130 1.4e-18 96.3 67 76.1
MSTRG.22544 Avicennia marina HOM05D000208 ORTHO05D000130 8.4e-16 87.0 69 68.1
Dinv37861 Davidia involucrata HOM05D000208 ORTHO05D000130 1.4e-15 86.3 67 65.7
Dinv20424 Davidia involucrata HOM05D000208 ORTHO05D000130 1.9e-15 85.9 67 65.7
Lj9A533T76 Lonicera japonica HOM05D000208 ORTHO05D000130 1.2e-14 83.2 67 62.7
Cc00_g27370 Coffea canephora HOM05D000208 ORTHO05D022181 2.7e-14 82.0 70 65.7
Oeu011095.1 Olea europaea HOM05D000208 ORTHO05D000130 3.5e-14 81.6 89 55.1
Migut.I01086 Erythranthe guttata HOM05D000208 ORTHO05D000130 4.6e-14 81.3 69 62.3
Eucgr.J02807 Eucalyptus grandis HOM05D000208 ORTHO05D000130 6.0e-14 80.9 67 61.2
Rhsim12G0210300 Rhododendron simsii HOM05D000208 ORTHO05D000130 1.3e-13 79.7 89 52.8
Actinidia26023 Actinidia chinensis HOM05D000208 ORTHO05D000130 1.8e-13 79.3 88 51.1
CAN.G344.5 Capsicum annuum HOM05D000208 ORTHO05D022181 1.8e-13 79.3 77 61.0
MELO3C024348.2 Cucumis melo HOM05D000208 ORTHO05D000130 3.0e-13 78.6 69 60.9
Thecc.06G121800 Theobroma cacao HOM05D000208 ORTHO05D000130 3.0e-13 78.6 70 62.9
Potri.001G167700 Populus trichocarpa HOM05D000208 ORTHO05D000130 5.1e-13 77.8 72 61.1
QL05p004060 Quercus lobata HOM05D000208 ORTHO05D000130 5.1e-13 77.8 94 48.9
CsaV3_7G034390 Cucumis sativus L. HOM05D000208 ORTHO05D000130 6.7e-13 77.4 69 60.9
Manes.04G145800 Manihot esculenta HOM05D000208 ORTHO05D000130 6.7e-13 77.4 94 53.2
TAR624G0057 Trochodendron aralioides HOM05D000208 ORTHO05D000130 6.7e-13 77.4 101 48.5
Aqoxy7G04077 Aquilegia oxysepala HOM05D000208 ORTHO05D000130 8.7e-13 77.0 65 61.5
SGA_v2.0_scaffold122G33344 Striga asiatica HOM05D000208 ORTHO05D000130 1.1e-12 76.6 61 63.9
Sabra01G0125800 Salix brachista HOM05D000208 ORTHO05D000130 1.5e-12 76.3 72 59.7
Cc05_g01710 Coffea canephora HOM05D000208 ORTHO05D022181 1.9e-12 75.9 68 60.3
Prupe.3G039200 Prunus persica HOM05D000208 ORTHO05D000130 1.9e-12 75.9 69 63.8
Duzib192G0847 Durio zibethinus HOM05D000208 ORTHO05D000130 2.5e-12 75.5 70 60.0
CiPaw.01G217600 Carya illinoinensis HOM05D000208 ORTHO05D000130 3.3e-12 75.1 75 58.7
Sabra03G0039000 Salix brachista HOM05D000208 ORTHO05D000130 3.3e-12 75.1 76 53.9
COL.COLO4_30742 Corchorus olitorius HOM05D000208 ORTHO05D000130 4.3e-12 74.7 75 57.3
DCAR_016115 Daucus carota HOM05D000208 ORTHO05D000130 7.4e-12 73.9 65 60.0
ClCG09G001030 Citrullus lanatus HOM05D000208 ORTHO05D000130 1.3e-11 73.2 69 59.4
MBI19_g47928_MAGBIO Magnolia biondii HOM05D000208 ORTHO05D000130 1.6e-11 72.8 67 61.2
MD09G1180900 Malus domestica HOM05D000208 ORTHO05D000130 1.6e-11 72.8 69 58.0
Nn6g35701 Nelumbo nucifera HOM05D000208 ORTHO05D000130 1.6e-11 72.8 65 56.9
RcHm_v2.0_Chr2g0145961 Rosa chinensis HOM05D000208 ORTHO05D000130 1.6e-11 72.8 70 60.0
DCAR_026417 Daucus carota HOM05D000208 ORTHO05D000130 2.2e-11 72.4 87 44.8
Hma1.2p1_0686F.1_g203361 Hydrangea macrophylla HOM05D000208 ORTHO05D000130 2.8e-11 72.0 65 58.5
AT1G17420 Arabidopsis thaliana HOM05D000208 ORTHO05D000130 3.7e-11 71.6 83 50.6
BcaB03g12999 Brassica carinata HOM05D000208 ORTHO05D000130 3.7e-11 71.6 75 54.7
BcaB05g24762 Brassica carinata HOM05D000208 ORTHO05D000130 3.7e-11 71.6 54 66.7
Carub.0002s1938 Capsella rubella HOM05D000208 ORTHO05D000130 3.7e-11 71.6 54 66.7
Cfa003524 Carpinus fangiana HOM05D000208 ORTHO05D000130 3.7e-11 71.6 91 51.6
Oeu000403.1 Olea europaea HOM05D000208 ORTHO05D000130 3.7e-11 71.6 69 58.0
Sp5g27600 Schrenkiella parvula HOM05D000208 ORTHO05D000130 3.7e-11 71.6 75 53.3
Thhalv10018089m.g Eutrema salsugineum HOM05D000208 ORTHO05D000130 4.8e-11 71.2 67 55.2
FvH4_6g34970 Fragaria vesca HOM05D000208 ORTHO05D000130 4.8e-11 71.2 72 56.9
FAN14G4250 Fragaria x ananassa HOM05D000208 ORTHO05D000130 4.8e-11 71.2 72 56.9
Nn8g38625 Nelumbo nucifera HOM05D000208 ORTHO05D000130 4.8e-11 71.2 65 61.5
QL05p004076 Quercus lobata HOM05D000208 ORTHO05D000130 4.8e-11 71.2 91 47.3
GSVIVG01016738001 Vitis vinifera HOM05D000208 ORTHO05D000130 4.8e-11 71.2 70 55.7
Sp1g15560 Schrenkiella parvula HOM05D000208 ORTHO05D000130 6.3e-11 70.9 83 50.6
CARHR018010 Cardamine hirsuta HOM05D000208 ORTHO05D000130 8.2e-11 70.5 83 48.2
FAN05G2841 Fragaria x ananassa HOM05D000208 ORTHO05D000130 8.2e-11 70.5 72 56.9
FAN09G4165 Fragaria x ananassa HOM05D000208 ORTHO05D000130 8.2e-11 70.5 72 56.9
AL2G32210 Arabidopsis lyrata HOM05D000208 ORTHO05D000130 1.1e-10 70.1 54 64.8
CARHR065460 Cardamine hirsuta HOM05D000208 ORTHO05D000130 1.1e-10 70.1 57 63.2
BcaC07g38858 Brassica carinata HOM05D000208 ORTHO05D000130 1.4e-10 69.7 75 53.3
BcaC07g41421 Brassica carinata HOM05D000208 ORTHO05D000130 1.4e-10 69.7 83 48.2
A08p30900 Brassica napus HOM05D000208 ORTHO05D000130 1.4e-10 69.7 75 53.3
C08p17950 Brassica napus HOM05D000208 ORTHO05D000130 1.4e-10 69.7 75 53.3
C08p43870 Brassica napus HOM05D000208 ORTHO05D000130 1.4e-10 69.7 83 48.2
BolC8t49428H Brassica oleracea HOM05D000208 ORTHO05D000130 1.4e-10 69.7 75 53.3
BolC8t51936H Brassica oleracea HOM05D000208 ORTHO05D000130 1.4e-10 69.7 83 48.2
BraA08t35022Z Brassica rapa HOM05D000208 ORTHO05D000130 1.4e-10 69.7 75 53.3
Haze_16042 Corylus avellana HOM05D000208 ORTHO05D000130 1.4e-10 69.7 93 48.4
TWI79G1762 Tripterygium wilfordii HOM05D000208 ORTHO05D000130 1.4e-10 69.7 73 60.3
AT1G72520 Arabidopsis thaliana HOM05D000208 ORTHO05D000130 1.8e-10 69.3 81 53.1
A09p60380 Brassica napus HOM05D000208 ORTHO05D000130 1.8e-10 69.3 83 47.0
BraA09t41410Z Brassica rapa HOM05D000208 ORTHO05D000130 1.8e-10 69.3 83 47.0
BcaC03g15398 Brassica carinata HOM05D000208 ORTHO05D000130 2.4e-10 68.9 80 50.0
A02p18060 Brassica napus HOM05D000208 ORTHO05D000130 2.4e-10 68.9 80 50.0
C02p30090 Brassica napus HOM05D000208 ORTHO05D000130 2.4e-10 68.9 80 50.0
BolC2t09058H Brassica oleracea HOM05D000208 ORTHO05D000130 2.4e-10 68.9 80 50.0
BraA02t06853Z Brassica rapa HOM05D000208 ORTHO05D000130 2.4e-10 68.9 80 50.0
MD17G1167100 Malus domestica HOM05D000208 ORTHO05D000130 2.4e-10 68.9 69 56.5
AL1G29680 Arabidopsis lyrata HOM05D000208 ORTHO05D000130 3.1e-10 68.6 83 48.2
QL02p039588 Quercus lobata HOM05D007170 ORTHO05D009243 4.1e-10 68.2 84 44.0
Thhalv10006732m.g Eutrema salsugineum HOM05D000208 ORTHO05D000130 5.3e-10 67.8 56 58.9
Gohir.A10G054600 Gossypium hirsutum HOM05D000208 ORTHO05D000130 6.9e-10 67.4 74 51.4
Gohir.D10G056600 Gossypium hirsutum HOM05D000208 ORTHO05D000130 6.9e-10 67.4 74 51.4
Gorai.011G060400 Gossypium raimondii HOM05D000208 ORTHO05D000130 6.9e-10 67.4 74 51.4
THA.LOC104814043 Tarenaya hassleriana HOM05D000208 ORTHO05D000130 6.9e-10 67.4 79 48.1
TWI75G1543 Tripterygium wilfordii HOM05D000208 ORTHO05D000130 9.0e-10 67.0 94 52.1
CANSAT56G3587 Cannabis sativa HOM05D000208 ORTHO05D000130 1.2e-09 66.6 63 60.3
Duzib235G1046 Durio zibethinus HOM05D000208 ORTHO05D000130 1.2e-09 66.6 71 54.9
Medtr8g020970 Medicago truncatula HOM05D000208 ORTHO05D000130 1.2e-09 66.6 57 63.2
VMungo0331G0225 Vigna mungo HOM05D000208 ORTHO05D000130 1.2e-09 66.6 57 61.4
Glyma.19G263300 Glycine max HOM05D000208 ORTHO05D000130 1.5e-09 66.2 93 51.6
Atru.chr1.4003 Acer truncatum HOM05D000208 ORTHO05D000130 2.0e-09 65.9 93 45.2
Atru.chr1.4020 Acer truncatum HOM05D000208 ORTHO05D000130 2.0e-09 65.9 93 45.2
Aa31LG4G2850 Aethionema arabicum HOM05D000208 ORTHO05D000130 2.0e-09 65.9 79 48.1
Sed0006888 Sechium edule HOM05D000208 ORTHO05D000130 2.0e-09 65.9 81 46.9
Carub.0001s1718 Capsella rubella HOM05D000208 ORTHO05D000130 2.6e-09 65.5 56 58.9
Glyma.07G039900 Glycine max HOM05D000208 ORTHO05D000130 2.6e-09 65.5 78 50.0
Glyma.16G008700 Glycine max HOM05D000208 ORTHO05D000130 2.6e-09 65.5 78 50.0
Lalb_Chr04g0261111 Lupinus albus HOM05D000208 ORTHO05D000130 2.6e-09 65.5 92 44.6
Lsat_1_v5_gn_4_93560 Lactuca sativa HOM05D000208 ORTHO05D000130 4.5e-09 64.7 68 51.5
PSO724G0434 Papaver somniferum HOM05D000208 ORTHO05D000130 4.5e-09 64.7 89 44.9
Phvul.010G128800 Phaseolus vulgaris HOM05D000208 ORTHO05D000130 4.5e-09 64.7 82 46.3
arahy.Tifrunner.gnm1.ann1.TRRP7J Arachis hypogaea HOM05D000208 ORTHO05D000130 5.9e-09 64.3 57 57.9
Actinidia02882 Actinidia chinensis HOM05D000208 ORTHO05D000130 7.6e-09 63.9 50 70.0
Cpa.g.sc25.128 Carica papaya HOM05D000208 ORTHO05D000130 7.6e-09 63.9 77 51.9
PSO135G0265 Papaver somniferum HOM05D000208 ORTHO05D000130 7.6e-09 63.9 89 44.9
Psat4g168720 Pisum sativum HOM05D000208 ORTHO05D000130 7.6e-09 63.9 66 53.0
arahy.Tifrunner.gnm1.ann1.J2XU5N Arachis hypogaea HOM05D000208 ORTHO05D000130 1.3e-08 63.2 60 56.7
Lsat_1_v5_gn_1_38321 Lactuca sativa HOM05D000208 ORTHO05D000130 1.3e-08 63.2 67 55.2
TPR.G16748 Trifolium pratense HOM05D000208 ORTHO05D000130 1.3e-08 63.2 57 59.6
PGR102G0779 Punica granatum HOM05D000208 ORTHO05D000130 1.7e-08 62.8 79 46.8
Sc15g0000460 Simmondsia chinensis HOM05D000208 ORTHO05D000130 1.7e-08 62.8 72 54.2
Glyma.03G264300 Glycine max HOM05D000208 ORTHO05D000130 2.9e-08 62.0 93 48.4
THA.LOC104808056 Tarenaya hassleriana HOM05D000208 ORTHO05D000130 2.9e-08 62.0 79 44.3
HanXRQChr09g0276861 Helianthus annuus HOM05D000208 ORTHO05D000130 3.8e-08 61.6 68 54.4
Lalb_Chr04g0263571 Lupinus albus HOM05D000208 ORTHO05D000130 3.8e-08 61.6 72 52.8
Lj3g0012720 Lotus japonicus HOM05D000208 ORTHO05D000130 5.0e-08 61.2 53 62.3
Ca_23392_v3 Cicer arietinum L. HOM05D000208 ORTHO05D000130 6.5e-08 60.8 57 56.1
EL10Ac7g16422 Beta vulgaris HOM05D000208 ORTHO05D000130 8.5e-08 60.5 48 64.6
ECA247G2397 Erigeron canadensis HOM05D000208 ORTHO05D000130 1.1e-07 60.1 69 50.7
THA.LOC104808057 Tarenaya hassleriana HOM05D000208 ORTHO05D000130 1.1e-07 60.1 79 43.0
AUR62001467 Chenopodium quinoa HOM05D000208 ORTHO05D000130 1.4e-07 59.7 48 64.6
vmacro22034 Vaccinium macrocarpon HOM05D000208 ORTHO05D000130 2.5e-07 58.9 73 57.5
CDE06G2187 Ceratophyllum demersum HOM05D000208 ORTHO05D000130 5.5e-07 57.8 64 50.0
Phvul.009G262900 Phaseolus vulgaris HOM05D000208 ORTHO05D000130 5.5e-07 57.8 93 44.1
ECA232G0914 Erigeron canadensis HOM05D000208 ORTHO05D000130 7.2e-07 57.4 68 48.5
TAR624G0783 Trochodendron aralioides HOM05D000208 ORTHO05D000130 7.2e-07 57.4 54 57.4
HPP92_028263 Vanilla planifolia HOM05D000208 ORTHO05D000130 9.3e-07 57.0 62 51.6
Hund18685 Selenicereus undatus HOM05D000208 ORTHO05D000130 1.6e-06 56.2 50 60.0
VMungo1309G1025 Vigna mungo HOM05D000208 ORTHO05D000130 3.6e-06 55.1 93 44.1
Ciclev10024819m.g Citrus clementina HOM05D000208 ORTHO05D000130 7.9e-06 53.9 73 45.2


User provided reference genes

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