Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G526.3 Capsicum annuum HOM05D004363 ORTHO05D005110 9.1e-39 163.3 95 100.0
THA.LOC104820934 Tarenaya hassleriana HOM05D004363 ORTHO05D005110 2.8e-11 72.0 76 55.3
A03p07650 Brassica napus HOM05D004363 ORTHO05D005110 4.7e-11 71.2 76 67.1
BraA03t10093Z Brassica rapa HOM05D004363 ORTHO05D005110 4.7e-11 71.2 76 67.1
Sp6g27880 Schrenkiella parvula HOM05D004363 ORTHO05D005110 4.7e-11 71.2 76 67.1
CAN.G911.40 Capsicum annuum HOM05D004363 ORTHO05D005110 8.0e-11 70.5 81 46.9
Aa31LG11G13340 Aethionema arabicum HOM05D004363 ORTHO05D005110 1.0e-10 70.1 76 65.8
BcaB01g04994 Brassica carinata HOM05D004363 ORTHO05D005110 1.0e-10 70.1 55 85.5
Carub.0006s1447 Capsella rubella HOM05D004363 ORTHO05D005110 1.0e-10 70.1 76 65.8
Solyc01g006960.3 Solanum lycopersicum HOM05D004363 ORTHO05D005110 1.0e-10 70.1 81 66.7
Sopen01g002950 Solanum pennellii HOM05D004363 ORTHO05D005110 1.0e-10 70.1 81 66.7
BolC3t13384H Brassica oleracea HOM05D004363 ORTHO05D005110 1.4e-10 69.7 76 65.8
CDE11G0453 Ceratophyllum demersum HOM05D004363 ORTHO05D005110 1.4e-10 69.7 81 63.0
Thhalv10012466m.g Eutrema salsugineum HOM05D004363 ORTHO05D005110 1.4e-10 69.7 76 65.8
CARHR197030 Cardamine hirsuta HOM05D004363 ORTHO05D005110 1.8e-10 69.3 76 65.8
BcaNung06113 Brassica carinata HOM05D004363 ORTHO05D005110 2.3e-10 68.9 76 65.8
Peaxi162Scf00582g00064 Petunia axillaris HOM05D004363 ORTHO05D005110 3.0e-10 68.6 81 65.4
A10p22780 Brassica napus HOM05D004363 ORTHO05D005110 4.0e-10 68.2 76 64.5
C03p08890 Brassica napus HOM05D004363 ORTHO05D005110 4.0e-10 68.2 76 64.5
BraA10t44344Z Brassica rapa HOM05D004363 ORTHO05D005110 4.0e-10 68.2 76 64.5
TWI77G0878 Tripterygium wilfordii HOM05D004363 ORTHO05D005110 4.0e-10 68.2 76 69.7
BolC9t58910H Brassica oleracea HOM05D004363 ORTHO05D005110 5.2e-10 67.8 76 64.5
Aqoxy1G00638 Aquilegia oxysepala HOM05D004363 ORTHO05D005110 1.5e-09 66.2 81 64.2
MSTRG.5891 Avicennia marina HOM05D004363 ORTHO05D005110 1.5e-09 66.2 81 64.2
CANSAT64G2344 Cannabis sativa HOM05D004363 ORTHO05D005110 1.5e-09 66.2 81 63.0
SEGI_28545 Sequoiadendron giganteum HOM05D004363 ORTHO05D005110 1.5e-09 66.2 79 65.8
TWI74G0412 Tripterygium wilfordii HOM05D004363 ORTHO05D005110 1.5e-09 66.2 76 68.4
AT5G16280 Arabidopsis thaliana HOM05D004363 ORTHO05D005110 3.4e-09 65.1 73 43.8
DCAR_020694 Daucus carota HOM05D004363 ORTHO05D005110 3.4e-09 65.1 81 58.0
ECA233G0072 Erigeron canadensis HOM05D004363 ORTHO05D005110 3.4e-09 65.1 81 64.2
HanXRQChr02g0053261 Helianthus annuus HOM05D004363 ORTHO05D005110 3.4e-09 65.1 81 64.2
QL07p036386 Quercus lobata HOM05D004363 ORTHO05D005110 3.4e-09 65.1 76 67.1
Gohir.D04G092000 Gossypium hirsutum HOM05D004363 ORTHO05D005110 4.4e-09 64.7 75 48.0
Gorai.009G393900 Gossypium raimondii HOM05D004363 ORTHO05D005110 4.4e-09 64.7 75 48.0
Lalb_Chr01g0017831 Lupinus albus HOM05D004363 ORTHO05D005110 4.4e-09 64.7 76 64.5
SGA_v2.0_scaffold13G06653 Striga asiatica HOM05D004363 ORTHO05D005110 4.4e-09 64.7 76 64.5
MSTRG.19302 Avicennia marina HOM05D004363 ORTHO05D005110 5.7e-09 64.3 76 67.1
COL.COLO4_29546 Corchorus olitorius HOM05D004363 ORTHO05D005110 5.7e-09 64.3 81 42.0
Lsat_1_v5_gn_6_33820 Lactuca sativa HOM05D004363 ORTHO05D005110 5.7e-09 64.3 81 64.2
Oeu035643.1 Olea europaea HOM05D004363 ORTHO05D005110 5.7e-09 64.3 57 82.5
CiPaw.10G018600 Carya illinoinensis HOM05D004363 ORTHO05D005110 7.5e-09 63.9 76 65.8
FAN09G2042 Fragaria x ananassa HOM05D004363 ORTHO05D005110 7.5e-09 63.9 76 44.7
Lalb_Chr25g0287961 Lupinus albus HOM05D004363 ORTHO05D005110 7.5e-09 63.9 81 61.7
Nn6g34649 Nelumbo nucifera HOM05D004363 ORTHO05D005110 7.5e-09 63.9 76 64.5
Atru.chr8.1332 Acer truncatum HOM05D004363 ORTHO05D005110 9.8e-09 63.5 81 60.5
ATR0772G191 Amborella trichopoda HOM05D004363 ORTHO05D005110 9.8e-09 63.5 76 53.9
AL6G27170 Arabidopsis lyrata HOM05D004363 ORTHO05D005110 9.8e-09 63.5 52 80.8
FAN02G1528 Fragaria x ananassa HOM05D004363 ORTHO05D005110 9.8e-09 63.5 76 59.2
Phvul.001G196200 Phaseolus vulgaris HOM05D004363 ORTHO05D005110 9.8e-09 63.5 81 61.7
VMungo1383G2497 Vigna mungo HOM05D004363 ORTHO05D005110 9.8e-09 63.5 81 61.7
arahy.Tifrunner.gnm1.ann1.D60SL5 Arachis hypogaea HOM05D004363 ORTHO05D005110 1.3e-08 63.2 81 60.5
arahy.Tifrunner.gnm1.ann1.KT4HPP Arachis hypogaea HOM05D004363 ORTHO05D005110 1.3e-08 63.2 81 60.5
CSS0038425 Camellia sinensis var. sinensis HOM05D004363 ORTHO05D005110 1.3e-08 63.2 81 61.7
Ca_09062_v3 Cicer arietinum L. HOM05D004363 ORTHO05D005110 1.3e-08 63.2 81 61.7
MELO3C009547.2 Cucumis melo HOM05D004363 ORTHO05D005110 1.3e-08 63.2 76 64.5
Duzib128G0297 Durio zibethinus HOM05D004363 ORTHO05D005110 1.3e-08 63.2 81 61.7
MD14G1040700 Malus domestica HOM05D004363 ORTHO05D005110 1.3e-08 63.2 76 64.5
SEGI_03324 Sequoiadendron giganteum HOM05D004363 ORTHO05D005110 1.3e-08 63.2 76 64.5
Thecc.05G106200 Theobroma cacao HOM05D004363 ORTHO05D005110 1.3e-08 63.2 81 60.5
TAR169G0003 Trochodendron aralioides HOM05D004363 ORTHO05D005110 1.3e-08 63.2 81 63.0
Glyma.03G202700 Glycine max HOM05D004363 ORTHO05D005110 1.7e-08 62.8 81 61.7
Glyma.19G200400 Glycine max HOM05D004363 ORTHO05D005110 1.7e-08 62.8 81 61.7
Lj1g0000064 Lotus japonicus HOM05D004363 ORTHO05D005110 1.7e-08 62.8 76 63.2
Manes.08G034300 Manihot esculenta HOM05D004363 ORTHO05D005110 1.7e-08 62.8 81 63.0
Rhsim11G0045000 Rhododendron simsii HOM05D004363 ORTHO05D005110 1.7e-08 62.8 81 51.9
Eucgr.A02575 Eucalyptus grandis HOM05D004363 ORTHO05D005110 2.2e-08 62.4 81 61.7
MD12G1041600 Malus domestica HOM05D004363 ORTHO05D005110 2.2e-08 62.4 76 65.8
Pp3c6_8810 Physcomitrium patens HOM05D004363 ORTHO05D005110 2.2e-08 62.4 76 46.1
TPR.G31289 Trifolium pratense HOM05D004363 ORTHO05D005110 2.2e-08 62.4 81 61.7
CsaV3_3G038050 Cucumis sativus L. HOM05D004363 ORTHO05D005110 2.8e-08 62.0 76 63.2
PSO384G4461 Papaver somniferum HOM05D004363 ORTHO05D005110 2.8e-08 62.0 81 61.7
TAR628G0010 Trochodendron aralioides HOM05D004363 ORTHO05D005110 2.8e-08 62.0 81 61.7
HPP92_013952 Vanilla planifolia HOM05D004363 ORTHO05D005110 2.8e-08 62.0 76 63.2
Cfa020046 Carpinus fangiana HOM05D004363 ORTHO05D005110 3.7e-08 61.6 74 67.6
AUR62030686 Chenopodium quinoa HOM05D004363 ORTHO05D005110 3.7e-08 61.6 57 52.6
AUR62041186 Chenopodium quinoa HOM05D004363 ORTHO05D005110 3.7e-08 61.6 57 52.6
ClCG10G018260 Citrullus lanatus HOM05D004363 ORTHO05D005110 3.7e-08 61.6 74 66.2
Ciclev10010925m.g Citrus clementina HOM05D004363 ORTHO05D005110 3.7e-08 61.6 76 64.5
Haze_20158 Corylus avellana HOM05D004363 ORTHO05D005110 3.7e-08 61.6 74 67.6
Medtr7g106380 Medicago truncatula HOM05D004363 ORTHO05D005110 3.7e-08 61.6 81 60.5
Os03g0786900 Oryza sativa ssp. japonica HOM05D004363 ORTHO05D005110 3.7e-08 61.6 59 79.7
Psat0s3922g0040 Pisum sativum HOM05D004363 ORTHO05D005110 3.7e-08 61.6 81 60.5
Prupe.7G093600 Prunus persica HOM05D004363 ORTHO05D005110 3.7e-08 61.6 76 64.5
PGR004G0690 Punica granatum HOM05D004363 ORTHO05D005110 3.7e-08 61.6 76 64.5
Ah.07g203620 Amaranthus hybridus HOM05D004363 ORTHO05D005110 4.9e-08 61.2 55 76.4
EL10Ac5g11738 Beta vulgaris HOM05D004363 ORTHO05D005110 4.9e-08 61.2 57 77.2
Dinv31774 Davidia involucrata HOM05D004363 ORTHO05D005110 4.9e-08 61.2 81 61.7
Lj1A1055T62 Lonicera japonica HOM05D004363 ORTHO05D005110 4.9e-08 61.2 81 61.7
Hund10860 Selenicereus undatus HOM05D004363 ORTHO05D005110 4.9e-08 61.2 57 78.9
Sc01g0005470 Simmondsia chinensis HOM05D004363 ORTHO05D005110 4.9e-08 61.2 57 80.7
Zm00001eb060010 Zea mays HOM05D004363 ORTHO05D005110 4.9e-08 61.2 59 59.3
Migut.J00693 Erythranthe guttata HOM05D004363 ORTHO05D005110 6.3e-08 60.8 76 63.2
FvH4_6g20450 Fragaria vesca HOM05D004363 ORTHO05D005110 6.3e-08 60.8 76 63.2
FAN05G1872 Fragaria x ananassa HOM05D004363 ORTHO05D005110 6.3e-08 60.8 76 63.2
FAN05G3395 Fragaria x ananassa HOM05D004363 ORTHO05D005110 6.3e-08 60.8 76 63.2
FAN14G2782 Fragaria x ananassa HOM05D004363 ORTHO05D005110 6.3e-08 60.8 76 63.2
PSO339G1158 Papaver somniferum HOM05D004363 ORTHO05D005110 6.3e-08 60.8 81 60.5
Cpa.g.sc104.18 Carica papaya HOM05D004363 ORTHO05D005110 8.3e-08 60.5 74 62.2
GSVIVG01022591001 Vitis vinifera HOM05D004363 ORTHO05D005110 8.3e-08 60.5 81 61.7
vmacro07483 Vaccinium macrocarpon HOM05D004363 ORTHO05D005110 1.4e-07 59.7 81 60.5
Duzib093G0100 Durio zibethinus HOM05D004363 ORTHO05D005110 1.8e-07 59.3 81 60.5
Potri.016G068800 Populus trichocarpa HOM05D004363 ORTHO05D005110 2.4e-07 58.9 81 58.0
AagrBONN_evm.TU.Sc2ySwM_228.1566 Anthoceros agrestis HOM05D004363 ORTHO05D005110 3.1e-07 58.5 76 43.4
Cc06_g06670 Coffea canephora HOM05D004363 ORTHO05D005110 3.1e-07 58.5 57 75.4
Glyma.19G200100 Glycine max HOM05D003781 ORTHO05D004299 3.1e-07 58.5 50 86.0
Sabra16G0069700 Salix brachista HOM05D004363 ORTHO05D005110 3.1e-07 58.5 81 58.0
Gohir.A11G315700 Gossypium hirsutum HOM05D004363 ORTHO05D005110 4.1e-07 58.2 57 77.2
Gohir.D11G332900 Gossypium hirsutum HOM05D004363 ORTHO05D005110 4.1e-07 58.2 57 77.2
Gorai.007G363900 Gossypium raimondii HOM05D004363 ORTHO05D005110 4.1e-07 58.2 57 77.2
RcHm_v2.0_Chr3g0476301 Rosa chinensis HOM05D004363 ORTHO05D005110 5.4e-07 57.8 76 61.8
SHI08956 Sapria himalayana HOM05D004363 ORTHO05D005110 5.4e-07 57.8 73 63.0
Sed0002127 Sechium edule HOM05D004363 ORTHO05D005110 5.4e-07 57.8 76 61.8
Sopen12g017710 Solanum pennellii HOM05D000002 ORTHO05D000001 2.0e-06 55.8 42 61.9


User provided reference genes

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