Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G525.4 Capsicum annuum HOM05D004769 ORTHO05D005605 1.4e-195 686.4 434 100.0
Nitab4.5_0000574g0160 Nicotiana tabacum HOM05D004769 ORTHO05D005605 9.2e-179 630.6 436 93.1
Sopen04g006720 Solanum pennellii HOM05D004769 ORTHO05D005605 2.7e-178 629.0 435 92.9
PGSC0003DMG400023617 Solanum tuberosum HOM05D004769 ORTHO05D005605 1.3e-177 626.7 435 92.6
Solyc04g014560.4 Solanum lycopersicum HOM05D004769 ORTHO05D005605 5.6e-176 621.3 445 90.8
Peaxi162Scf00442g00627 Petunia axillaris HOM05D004769 ORTHO05D005605 1.4e-166 590.1 434 87.6
Cc07_g12960 Coffea canephora HOM05D004769 ORTHO05D005605 3.4e-141 505.8 435 72.4
Dinv19070 Davidia involucrata HOM05D004769 ORTHO05D005605 9.3e-139 497.7 431 74.5
Hma1.2p1_0158F.1_g069800 Hydrangea macrophylla HOM05D004769 ORTHO05D005605 7.6e-133 478.0 438 66.4
Thecc.04G060900 Theobroma cacao HOM05D004769 ORTHO05D005605 9.3e-131 471.1 447 74.0
CiPaw.03G077600 Carya illinoinensis HOM05D004769 ORTHO05D005605 1.2e-130 470.7 445 72.8
MSTRG.3686 Avicennia marina HOM05D004769 ORTHO05D005605 7.9e-130 468.0 444 71.2
Actinidia35715 Actinidia chinensis HOM05D004769 ORTHO05D005605 2.3e-129 466.5 434 68.2
Cpa.g.sc178.7 Carica papaya HOM05D004769 ORTHO05D005605 5.1e-129 465.3 455 73.4
Lj4A255T24 Lonicera japonica HOM05D004769 ORTHO05D005605 5.1e-129 465.3 426 69.0
Oeu032315.1 Olea europaea HOM05D004769 ORTHO05D005605 5.1e-129 465.3 503 62.6
Migut.H02243 Erythranthe guttata HOM05D004769 ORTHO05D005605 8.1e-127 458.0 438 70.1
EL10Ac6g13916 Beta vulgaris HOM05D004769 ORTHO05D005605 2.4e-126 456.4 460 67.2
PGR042G1215 Punica granatum HOM05D004769 ORTHO05D005605 2.6e-125 453.0 437 73.9
Sc11g0004750 Simmondsia chinensis HOM05D004769 ORTHO05D005605 7.6e-125 451.4 437 70.0
Hma1.2p1_0034F.1_g021310 Hydrangea macrophylla HOM05D004769 ORTHO05D005605 1.0e-124 451.1 407 76.9
Potri.004G075700 Populus trichocarpa HOM05D004769 ORTHO05D005605 1.0e-124 451.1 434 68.9
Lsat_1_v5_gn_8_18601 Lactuca sativa HOM05D004769 ORTHO05D005605 6.4e-124 448.4 436 65.6
Oeu029083.1 Olea europaea HOM05D004769 ORTHO05D005605 1.1e-123 447.6 511 60.7
TAR375G0174 Trochodendron aralioides HOM05D004769 ORTHO05D005605 1.1e-123 447.6 446 60.5
Gohir.D08G062500 Gossypium hirsutum HOM05D004769 ORTHO05D005605 2.5e-123 446.4 435 75.2
Gorai.004G064700 Gossypium raimondii HOM05D004769 ORTHO05D005605 5.5e-123 445.3 435 74.7
Medtr5g077180 Medicago truncatula HOM05D004769 ORTHO05D005605 5.5e-123 445.3 433 72.1
Atru.chr1.1954 Acer truncatum HOM05D004769 ORTHO05D005605 7.1e-123 444.9 437 68.2
Haze_14305 Corylus avellana HOM05D004769 ORTHO05D005605 7.1e-123 444.9 437 70.0
Cfa007768 Carpinus fangiana HOM05D004769 ORTHO05D005605 1.6e-122 443.7 442 72.9
GSVIVG01026312001 Vitis vinifera HOM05D004769 ORTHO05D005605 2.7e-122 443.0 436 65.6
ECA233G3826 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.6e-122 442.2 417 66.7
Potri.017G144121 Populus trichocarpa HOM05D004769 ORTHO05D005605 7.9e-122 441.4 438 71.2
THA.LOC104823824 Tarenaya hassleriana HOM05D004769 ORTHO05D005605 7.9e-122 441.4 437 69.3
TWI74G1557 Tripterygium wilfordii HOM05D004769 ORTHO05D005605 7.9e-122 441.4 439 67.9
Sabra04G0050400 Salix brachista HOM05D004769 ORTHO05D005605 2.3e-121 439.9 443 66.6
Gohir.A08G052900 Gossypium hirsutum HOM05D004769 ORTHO05D005605 3.0e-121 439.5 435 74.0
Lalb_Chr17g0345901 Lupinus albus HOM05D004769 ORTHO05D005605 3.0e-121 439.5 442 70.4
TWI77G0470 Tripterygium wilfordii HOM05D004769 ORTHO05D005605 3.9e-121 439.1 434 74.0
TPR.G9995 Trifolium pratense HOM05D004769 ORTHO05D005605 6.7e-121 438.3 437 71.9
CSS0001926 Camellia sinensis var. sinensis HOM05D004769 ORTHO05D005605 1.1e-120 437.6 264 80.3
MBI04_g35346_MAGBIO Magnolia biondii HOM05D004769 ORTHO05D005605 1.6e-119 433.7 434 72.1
Ah.02g128700 Amaranthus hybridus HOM05D004769 ORTHO05D005605 2.1e-119 433.3 512 59.4
Ca_05772_v3 Cicer arietinum L. HOM05D004769 ORTHO05D005605 2.1e-119 433.3 433 57.5
Prupe.1G069400 Prunus persica HOM05D004769 ORTHO05D005605 4.8e-119 432.2 438 69.4
VMungo0647G0921 Vigna mungo HOM05D004769 ORTHO05D005605 6.2e-119 431.8 448 70.1
HanXRQChr08g0218471 Helianthus annuus HOM05D004769 ORTHO05D005605 1.1e-118 431.0 435 64.8
Nitab4.5_0005193g0040 Nicotiana tabacum HOM05D004769 ORTHO05D005605 1.1e-118 431.0 339 91.7
Sed0006929 Sechium edule HOM05D004769 ORTHO05D005605 1.1e-118 431.0 450 68.4
PSO017G5633 Papaver somniferum HOM05D004769 ORTHO05D005605 2.4e-118 429.9 447 68.0
Phvul.008G239200 Phaseolus vulgaris HOM05D004769 ORTHO05D005605 3.1e-118 429.5 439 72.9
ClCG01G008650 Citrullus lanatus HOM05D004769 ORTHO05D005605 9.0e-118 427.9 441 70.1
Aqoxy5G00268 Aquilegia oxysepala HOM05D004769 ORTHO05D005605 1.2e-117 427.6 433 63.0
FvH4_4g06670 Fragaria vesca HOM05D004769 ORTHO05D005605 1.5e-117 427.2 447 65.8
AUR62017457 Chenopodium quinoa HOM05D004769 ORTHO05D005605 2.0e-117 426.8 417 63.3
Glyma.14G211600 Glycine max HOM05D004769 ORTHO05D005605 2.6e-117 426.4 444 71.4
COL.COLO4_05842 Corchorus olitorius HOM05D004769 ORTHO05D005605 3.4e-117 426.0 434 56.9
CANSAT78G2338 Cannabis sativa HOM05D004769 ORTHO05D005605 4.5e-117 425.6 447 69.1
RcHm_v2.0_Chr4g0398571 Rosa chinensis HOM05D004769 ORTHO05D005605 1.0e-116 424.5 449 63.9
Rhsim10G0183300 Rhododendron simsii HOM05D004769 ORTHO05D005605 2.2e-116 423.3 433 70.0
CsaV3_5G020660 Cucumis sativus L. HOM05D004769 ORTHO05D005605 3.8e-116 422.5 444 69.6
unitig_748.g7024 Utricularia gibba HOM05D004769 ORTHO05D005605 6.5e-116 421.8 246 84.6
MELO3C025080.2 Cucumis melo HOM05D004769 ORTHO05D005605 1.4e-115 420.6 491 65.0
Os05g0178900 Oryza sativa ssp. japonica HOM05D004769 ORTHO05D005605 2.5e-115 419.9 447 66.4
MD16G1242400 Malus domestica HOM05D004769 ORTHO05D005605 3.2e-115 419.5 428 67.5
AL7G46000 Arabidopsis lyrata HOM05D004769 ORTHO05D005605 7.1e-115 418.3 436 63.8
BolC4t25993H Brassica oleracea HOM05D004769 ORTHO05D005605 1.2e-114 417.5 450 60.0
Glyma.02G241900 Glycine max HOM05D004769 ORTHO05D005605 1.2e-114 417.5 482 63.7
MD13G1237000 Malus domestica HOM05D004769 ORTHO05D005605 1.6e-114 417.2 420 67.9
Sp7g05100 Schrenkiella parvula HOM05D004769 ORTHO05D005605 1.6e-114 417.2 449 54.3
Carub.0007s3249 Capsella rubella HOM05D004769 ORTHO05D005605 3.5e-114 416.0 451 62.3
FAN07G0829 Fragaria x ananassa HOM05D004769 ORTHO05D005605 7.9e-114 414.8 433 65.4
C04p44180 Brassica napus HOM05D004769 ORTHO05D005605 1.3e-113 414.1 451 58.8
Thhalv10027788m.g Eutrema salsugineum HOM05D004769 ORTHO05D005605 1.3e-113 414.1 440 66.1
QL02p060102 Quercus lobata HOM05D004769 ORTHO05D005605 3.0e-113 412.9 527 59.2
DCAR_028435 Daucus carota HOM05D004769 ORTHO05D005605 5.1e-113 412.1 257 76.7
vmacro20487 Vaccinium macrocarpon HOM05D004769 ORTHO05D005605 5.1e-113 412.1 234 82.5
FAN17G2568 Fragaria x ananassa HOM05D004769 ORTHO05D005605 6.7e-113 411.8 436 64.0
SGA_v2.0_scaffold45G17131 Striga asiatica HOM05D004769 ORTHO05D005605 1.1e-112 411.0 259 79.9
FAN12G3741 Fragaria x ananassa HOM05D004769 ORTHO05D005605 1.9e-112 410.2 438 63.5
Lj2C513G15 Lonicera japonica HOM05D004769 ORTHO05D005605 4.3e-112 409.1 427 52.7
ATR0083G043 Amborella trichopoda HOM05D004769 ORTHO05D005605 5.7e-112 408.7 443 67.9
AUR62032521 Chenopodium quinoa HOM05D004769 ORTHO05D005605 7.4e-112 408.3 416 55.0
HPP92_017811 Vanilla planifolia HOM05D004769 ORTHO05D005605 2.2e-111 406.8 442 63.1
FAN22G0974 Fragaria x ananassa HOM05D004769 ORTHO05D005605 2.8e-111 406.4 434 65.0
Nn1g02020 Nelumbo nucifera HOM05D004769 ORTHO05D005605 2.8e-111 406.4 433 67.9
SGA_v2.0_scaffold115G32089 Striga asiatica HOM05D004769 ORTHO05D005605 1.4e-110 404.1 436 63.5
TAR374G1377 Trochodendron aralioides HOM05D004769 ORTHO05D005605 1.4e-110 404.1 444 63.1
Zm00001eb377290 Zea mays HOM05D004769 ORTHO05D005605 1.4e-110 404.1 438 56.8
A04p10540 Brassica napus HOM05D004769 ORTHO05D005605 3.1e-110 402.9 445 57.8
arahy.Tifrunner.gnm1.ann1.SAK0JK Arachis hypogaea HOM05D004769 ORTHO05D005605 1.2e-109 401.0 473 66.4
BraA04t16720Z Brassica rapa HOM05D004769 ORTHO05D005605 2.9e-108 396.4 246 79.3
SHI30114 Sapria himalayana HOM05D002544 ORTHO05D007856 3.8e-108 396.0 234 81.2
BcaC02g09560 Brassica carinata HOM05D004769 ORTHO05D005605 1.9e-107 393.7 450 58.0
Lalb_Chr04g0251441 Lupinus albus HOM05D004769 ORTHO05D005605 7.2e-107 391.7 433 68.8
Migut.K01113 Erythranthe guttata HOM05D004769 ORTHO05D005605 6.9e-102 375.2 226 78.8
MapolyY_B0025 Marchantia polymorpha HOM05D004769 ORTHO05D005605 9.1e-102 374.8 262 69.8
Pp3c14_14980 Physcomitrium patens HOM05D004769 ORTHO05D005605 2.1e-98 363.6 229 73.8
Pp3c14_14989 Physcomitrium patens HOM05D004769 ORTHO05D005605 2.1e-98 363.6 229 73.8
Mapoly0017s0020 Marchantia polymorpha HOM05D004769 ORTHO05D005605 3.9e-97 359.4 265 67.5
SMO351G0501 Selaginella moellendorffii HOM05D004769 ORTHO05D005605 4.4e-96 355.9 230 72.6
CBR_g22246 Chara braunii HOM05D004769 ORTHO05D005605 2.2e-95 353.6 230 74.3
CARHR215720 Cardamine hirsuta HOM05D004769 ORTHO05D005605 4.8e-95 352.4 401 59.6
LjContig00141g0012428 Lotus japonicus HOM05D004769 ORTHO05D005605 4.5e-93 345.9 481 45.7
Eucgr.J01630 Eucalyptus grandis HOM05D004769 ORTHO05D005605 7.7e-93 345.1 389 73.8
PSO170G3102 Papaver somniferum HOM05D004769 ORTHO05D005605 7.0e-86 322.0 392 63.0
CDE02G3274 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 1.7e-79 300.8 154 87.0
Dinv28230 Davidia involucrata HOM05D004769 ORTHO05D005605 1.1e-78 298.1 337 65.0
Lalb_Chr10g0104091 Lupinus albus HOM05D004769 ORTHO05D005605 1.1e-75 288.1 148 86.5
Pp3c17_5870 Physcomitrium patens HOM05D004769 ORTHO05D005605 1.0e-73 281.6 211 67.8
CDE02G0598 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 1.3e-68 264.6 144 81.9
Ciclev10018227m.g Citrus clementina HOM05D004769 ORTHO05D005605 2.7e-61 240.4 146 78.1
Cre03.g178300 Chlamydomonas reinhardtii HOM05D004769 ORTHO05D005605 3.3e-59 233.4 262 50.0
Duzib211G0206 Durio zibethinus HOM05D004769 ORTHO05D005605 2.8e-58 230.3 323 68.4
MCO07G113 Micromonas commoda HOM05D004769 ORTHO05D005605 1.4e-57 228.0 222 50.5
PRCOL_00000163 Prasinoderma coloniale HOM05D004769 ORTHO05D005605 5.2e-57 226.1 204 53.9
Ciclev10015797m.g Citrus clementina HOM05D004769 ORTHO05D005605 6.8e-57 225.7 316 64.9
Lj1g0013060 Lotus japonicus HOM05D004769 ORTHO05D005605 7.5e-56 222.2 174 64.4
Oeu048972.1 Olea europaea HOM05D004769 ORTHO05D005605 3.7e-55 219.9 113 91.2
Sed0026946 Sechium edule HOM05D004769 ORTHO05D005605 1.4e-54 218.0 347 63.4
Zm00001eb283000 Zea mays HOM05D004769 ORTHO05D005605 9.2e-54 215.3 326 58.0
SEGI_40758 Sequoiadendron giganteum HOM05D004769 ORTHO05D005605 3.0e-52 210.3 148 70.3
CDE02G1258 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 1.1e-51 208.4 324 54.0
Manes.02G080000 Manihot esculenta HOM05D004769 ORTHO05D005605 5.2e-49 199.5 321 65.1
Sed0001997 Sechium edule HOM05D004769 ORTHO05D005605 4.9e-47 193.0 101 86.1
AT5G37370 Arabidopsis thaliana HOM05D004769 ORTHO05D005605 1.3e-44 184.9 318 52.2
Gohir.A02G124601 Gossypium hirsutum HOM05D004769 ORTHO05D005605 1.9e-43 181.0 96 86.5
SMO231G0026 Selaginella moellendorffii HOM05D004769 ORTHO05D005605 4.3e-43 179.9 196 53.1
CSS0045560 Camellia sinensis var. sinensis HOM05D004769 ORTHO05D005605 9.5e-43 178.7 96 82.3
Aa31LG9G17630 Aethionema arabicum HOM05D004769 ORTHO05D005605 2.1e-42 177.6 98 83.7
Zm00001eb361740 Zea mays HOM05D004769 ORTHO05D005605 1.3e-39 168.3 96 81.2
SMO231G0020 Selaginella moellendorffii HOM05D004769 ORTHO05D005605 7.1e-38 162.5 130 58.5
Zm00001eb046660 Zea mays HOM05D004769 ORTHO05D005605 6.0e-37 159.5 84 83.3
Zm00001eb221230 Zea mays HOM05D004769 ORTHO05D005605 6.6e-36 156.0 83 83.1
Psat2g044720 Pisum sativum HOM05D004769 ORTHO05D005605 1.9e-35 154.5 296 65.9
Lalb_Chr10g0104101 Lupinus albus HOM05D004769 ORTHO05D005605 7.3e-35 152.5 292 60.3
Gohir.A11G193800 Gossypium hirsutum HOM05D004769 ORTHO05D005605 9.6e-35 152.1 85 83.5
HanXRQChr14g0429111 Helianthus annuus HOM05D004769 ORTHO05D005605 1.1e-33 148.7 80 86.2
HanXRQChr14g0429051 Helianthus annuus HOM05D004769 ORTHO05D005605 4.4e-32 143.3 80 83.8
MD01G1153700 Malus domestica HOM05D004769 ORTHO05D005605 1.4e-30 138.3 79 81.0
Actinidia28787 Actinidia chinensis HOM05D004769 ORTHO05D005605 4.8e-26 123.2 321 46.4
FAN07G1815 Fragaria x ananassa HOM05D004769 ORTHO05D005605 5.3e-25 119.8 254 56.3
Gohir.A08G086562 Gossypium hirsutum HOM05D004769 ORTHO05D005605 1.2e-24 118.6 83 71.1
CSS0036345 Camellia sinensis var. sinensis HOM05D004769 ORTHO05D005605 8.4e-23 112.5 287 55.1
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 5.4e-22 109.8 292 50.0
ATR0127G005 Amborella trichopoda HOM05D004769 ORTHO05D005605 2.5e-19 100.9 77 70.1
HanXRQChr08g0224021 Helianthus annuus HOM05D004769 ORTHO05D005605 2.5e-19 100.9 60 80.0
Lj2g0009880 Lotus japonicus HOM05D004769 ORTHO05D005605 2.1e-18 97.8 74 59.5
Lj1g0013083 Lotus japonicus HOM05D004769 ORTHO05D005605 1.2e-16 92.0 68 58.8
CDE02G3573 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 8.4e-15 85.9 266 37.2
Zm00001eb313200 Zea mays HOM05D004769 ORTHO05D005605 3.9e-12 77.0 43 83.7
SMO351G0097 Selaginella moellendorffii HOM05D007698 ORTHO05D009663 8.7e-12 75.9 63 54.0
FAN23G0276 Fragaria x ananassa HOM05D004769 ORTHO05D005605 1.2e-08 65.5 57 57.9
AagrBONN_evm.TU.Sc2ySwM_344.2680 Anthoceros agrestis HOM05D004769 ORTHO05D005605 1.3e-07 62.0 246 52.0


User provided reference genes

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