Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G521.6 Capsicum annuum HOM05D007048 ORTHO05D008811 5.4e-90 334.3 172 100.0
Sopen07g028330 Solanum pennellii HOM05D007048 ORTHO05D008820 8.4e-67 257.3 147 89.1
Solyc07g054400.3 Solanum lycopersicum HOM05D007048 ORTHO05D008811 2.7e-65 252.3 147 87.8
PGSC0003DMG400018389 Solanum tuberosum HOM05D007048 ORTHO05D008811 1.9e-63 246.1 140 90.0
Nitab4.5_0002584g0070 Nicotiana tabacum HOM05D007048 ORTHO05D008811 3.5e-57 225.3 152 79.6
Nitab4.5_0003119g0030 Nicotiana tabacum HOM05D007048 ORTHO05D008811 3.3e-55 218.8 146 78.8
Peaxi162Scf01168g00014 Petunia axillaris HOM05D007048 ORTHO05D008811 5.6e-55 218.0 145 79.3
Actinidia18303 Actinidia chinensis HOM05D007048 ORTHO05D008811 1.2e-49 200.3 138 72.5
Dinv23221 Davidia involucrata HOM05D007048 ORTHO05D008811 6.0e-49 198.0 134 73.9
Migut.D01184 Erythranthe guttata HOM05D007048 ORTHO05D008811 5.1e-48 194.9 130 75.4
Cc04_g05890 Coffea canephora HOM05D007048 ORTHO05D008811 1.1e-45 187.2 138 70.3
Haze_07101 Corylus avellana HOM05D007048 ORTHO05D008811 6.9e-45 184.5 136 69.9
Manes.14G045100 Manihot esculenta HOM05D007048 ORTHO05D008811 9.0e-45 184.1 135 68.1
Rhsim08G0196900 Rhododendron simsii HOM05D007048 ORTHO05D008811 9.0e-45 184.1 128 72.7
Hma1.2p1_0664F.1_g199000 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 1.2e-44 183.7 123 74.8
SalBow1G8421 Salvia bowleyana HOM05D007048 ORTHO05D008811 1.2e-44 183.7 136 70.6
Prupe.5G142300 Prunus persica HOM05D007048 ORTHO05D008811 2.0e-44 183.0 129 71.3
Sabra15G0126100 Salix brachista HOM05D007048 ORTHO05D008811 2.0e-44 183.0 137 65.0
Cfa018710 Carpinus fangiana HOM05D007048 ORTHO05D008811 9.9e-44 180.6 123 72.4
TAR475G0007 Trochodendron aralioides HOM05D007048 ORTHO05D008811 4.9e-43 178.3 133 67.7
TAR629G1913 Trochodendron aralioides HOM05D007048 ORTHO05D008811 4.9e-43 178.3 133 67.7
RcHm_v2.0_Chr7g0188741 Rosa chinensis HOM05D007048 ORTHO05D008811 6.4e-43 177.9 127 67.7
GSVIVG01008645001 Vitis vinifera HOM05D007048 ORTHO05D008811 1.4e-42 176.8 130 70.0
Ciclev10033023m.g Citrus clementina HOM05D007048 ORTHO05D008811 1.9e-42 176.4 126 71.4
TWI39G0039 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 2.4e-42 176.0 132 68.9
TWI14G0368 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 4.2e-42 175.3 129 66.7
Potri.015G105900 Populus trichocarpa HOM05D007048 ORTHO05D008811 9.3e-42 174.1 125 68.0
MD06G1131300 Malus domestica HOM05D007048 ORTHO05D008811 2.1e-41 172.9 129 65.9
CiPaw.11G000300 Carya illinoinensis HOM05D007048 ORTHO05D008811 3.5e-41 172.2 134 67.2
vmacro19180 Vaccinium macrocarpon HOM05D007048 ORTHO05D008811 4.6e-41 171.8 132 68.2
FAN18G3224 Fragaria x ananassa HOM05D007048 ORTHO05D008811 1.8e-40 169.9 129 65.9
Thecc.03G140000 Theobroma cacao HOM05D007048 ORTHO05D008811 3.0e-40 169.1 133 65.4
MELO3C035737.2 Cucumis melo HOM05D007048 ORTHO05D008811 1.5e-39 166.8 118 68.6
QL10p000556 Quercus lobata HOM05D007048 ORTHO05D008811 1.9e-39 166.4 120 70.0
Duzib068G0404 Durio zibethinus HOM05D007048 ORTHO05D008811 2.5e-39 166.0 128 66.4
SGA_v2.0_scaffold40G15679 Striga asiatica HOM05D007048 ORTHO05D008811 2.5e-39 166.0 166 57.8
Cpa.g.sc13.165 Carica papaya HOM05D007048 ORTHO05D008811 4.3e-39 165.2 136 61.8
Gohir.D07G051200 Gossypium hirsutum HOM05D007048 ORTHO05D008811 3.7e-38 162.2 139 61.2
Gorai.001G054300 Gossypium raimondii HOM05D007048 ORTHO05D008811 3.7e-38 162.2 139 61.2
CsaV3_1G009910 Cucumis sativus L. HOM05D007048 ORTHO05D008811 4.8e-38 161.8 118 66.1
Atru.chr6.1912 Acer truncatum HOM05D007048 ORTHO05D008811 1.1e-37 160.6 134 60.4
Gohir.A07G046900 Gossypium hirsutum HOM05D007048 ORTHO05D008811 1.1e-37 160.6 139 60.4
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 1.4e-37 160.2 122 64.8
MBI07_g41901_MAGBIO Magnolia biondii HOM05D007048 ORTHO05D008811 1.4e-37 160.2 126 61.9
Aqoxy3G01543 Aquilegia oxysepala HOM05D007048 ORTHO05D008811 2.4e-37 159.5 114 69.3
ClCG03G004020 Citrullus lanatus HOM05D007048 ORTHO05D008811 2.4e-37 159.5 127 64.6
ECA246G0638 Erigeron canadensis HOM05D003971 ORTHO05D004762 3.1e-37 159.1 132 65.9
EL10Ac5g11295 Beta vulgaris HOM05D007048 ORTHO05D008811 5.3e-37 158.3 120 67.5
CANSAT56G3502 Cannabis sativa HOM05D007048 ORTHO05D008811 6.9e-37 157.9 118 67.8
CANSAT56G3230 Cannabis sativa HOM05D007048 ORTHO05D008811 9.0e-37 157.5 118 67.8
PSO384G0987 Papaver somniferum HOM05D007048 ORTHO05D008811 9.0e-37 157.5 126 64.3
unitig_747.g21321 Utricularia gibba HOM05D007048 ORTHO05D008811 9.0e-37 157.5 164 54.9
Hund10045 Selenicereus undatus HOM05D007048 ORTHO05D008811 1.2e-36 157.1 128 61.7
FAN04G3007 Fragaria x ananassa HOM05D007048 ORTHO05D008811 3.4e-36 155.6 123 64.2
PSO339G2722 Papaver somniferum HOM05D007048 ORTHO05D008811 4.5e-36 155.2 126 64.3
Lsat_1_v5_gn_5_10141 Lactuca sativa HOM05D007048 ORTHO05D008811 5.8e-36 154.8 133 63.2
Sc22g0003410 Simmondsia chinensis HOM05D007048 ORTHO05D008811 5.8e-36 154.8 140 60.0
Ah.02g114610 Amaranthus hybridus HOM05D007048 ORTHO05D008811 2.2e-35 152.9 133 59.4
AL8G25120 Arabidopsis lyrata HOM05D007048 ORTHO05D008811 4.9e-35 151.8 111 65.8
arahy.Tifrunner.gnm1.ann1.QNIR3T Arachis hypogaea HOM05D007048 ORTHO05D008811 4.9e-35 151.8 126 58.7
BraA03t10934Z Brassica rapa HOM05D007048 ORTHO05D008811 4.9e-35 151.8 111 65.8
BcaNung07188 Brassica carinata HOM05D007048 ORTHO05D008811 6.5e-35 151.4 111 65.8
A03p16450 Brassica napus HOM05D007048 ORTHO05D008811 6.5e-35 151.4 131 58.8
C03p19340 Brassica napus HOM05D007048 ORTHO05D008811 6.5e-35 151.4 111 65.8
BolC3t14320H Brassica oleracea HOM05D007048 ORTHO05D008811 6.5e-35 151.4 111 65.8
AT5G50930 Arabidopsis thaliana HOM05D007048 ORTHO05D008811 8.4e-35 151.0 147 55.1
HanXRQChr10g0316061 Helianthus annuus HOM05D007048 ORTHO05D008811 8.4e-35 151.0 129 62.8
Carub.0008s1094 Capsella rubella HOM05D007048 ORTHO05D008811 1.1e-34 150.6 111 67.6
Thhalv10014960m.g Eutrema salsugineum HOM05D007048 ORTHO05D008811 1.1e-34 150.6 126 59.5
Sp6g13100 Schrenkiella parvula HOM05D007048 ORTHO05D008811 1.4e-34 150.2 111 64.0
arahy.Tifrunner.gnm1.ann1.8FCI62 Arachis hypogaea HOM05D007048 ORTHO05D008811 2.5e-34 149.4 131 58.8
Sed0017197 Sechium edule HOM05D007048 ORTHO05D008811 4.2e-34 148.7 122 60.7
Aa31LG3G7430 Aethionema arabicum HOM05D007048 ORTHO05D008811 5.5e-34 148.3 110 63.6
CSS0012628 Camellia sinensis var. sinensis HOM05D007048 ORTHO05D008811 9.3e-34 147.5 138 58.7
Glyma.04G201000 Glycine max HOM05D007048 ORTHO05D008811 4.6e-33 145.2 128 59.4
Medtr3g098660 Medicago truncatula HOM05D007048 ORTHO05D008811 6.0e-33 144.8 128 58.6
Os04g0397700 Oryza sativa ssp. japonica HOM05D007048 ORTHO05D008811 6.0e-33 144.8 135 56.3
Phvul.009G161500 Phaseolus vulgaris HOM05D007048 ORTHO05D008811 7.9e-33 144.4 125 60.8
Psat5g055240 Pisum sativum HOM05D007048 ORTHO05D008811 7.9e-33 144.4 119 61.3
CARHR257290 Cardamine hirsuta HOM05D007048 ORTHO05D008811 1.0e-32 144.1 112 62.5
Lalb_Chr08g0237541 Lupinus albus HOM05D007048 ORTHO05D008811 1.0e-32 144.1 125 60.8
Lj1g0016164 Lotus japonicus HOM05D007048 ORTHO05D008811 1.8e-32 143.3 120 60.8
arahy.Tifrunner.gnm1.ann1.CS080T Arachis hypogaea HOM05D007048 ORTHO05D008811 2.3e-32 142.9 126 58.7
PGR031G3844 Punica granatum HOM05D007048 ORTHO05D008811 2.3e-32 142.9 136 57.4
PGR031G3072 Punica granatum HOM05D007048 ORTHO05D008811 3.9e-32 142.1 125 58.4
Hma1.2p1_0664F.1_g198980 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 6.7e-32 141.4 92 80.4
arahy.Tifrunner.gnm1.ann1.DD5QTF Arachis hypogaea HOM05D007048 ORTHO05D008811 8.7e-32 141.0 126 57.9
PGR031G2395 Punica granatum HOM05D007048 ORTHO05D008811 8.7e-32 141.0 136 55.9
VMungo1309G1627 Vigna mungo HOM05D007048 ORTHO05D008811 3.3e-31 139.0 113 60.2
Hma1.2p1_0664F.1_g198990 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 4.3e-31 138.7 84 83.3
Glyma.06G164400 Glycine max HOM05D007048 ORTHO05D008811 9.7e-31 137.5 128 57.8
TPR.G21584 Trifolium pratense HOM05D007048 ORTHO05D008811 1.6e-30 136.7 122 59.0
MD14G1147700 Malus domestica HOM05D007048 ORTHO05D008811 1.8e-29 133.3 96 64.6
Eucgr.K02194 Eucalyptus grandis HOM05D007048 ORTHO05D008811 7.6e-28 127.9 145 46.9
FvH4_5g09450 Fragaria vesca HOM05D007048 ORTHO05D008811 6.5e-27 124.8 96 63.5
AUR62009534 Chenopodium quinoa HOM05D007048 ORTHO05D008811 7.2e-26 121.3 94 63.8
HPP92_008245 Vanilla planifolia HOM05D007048 ORTHO05D008811 1.2e-25 120.6 122 54.1
PGR044G0448 Punica granatum HOM05D007048 ORTHO05D008811 1.6e-25 120.2 108 54.6
AUR62044083 Chenopodium quinoa HOM05D007048 ORTHO05D008811 3.6e-25 119.0 94 62.8
Nn3g16280 Nelumbo nucifera HOM05D007048 ORTHO05D008811 7.9e-25 117.9 81 72.8
AUR62041697 Chenopodium quinoa HOM05D007048 ORTHO05D008811 1.0e-24 117.5 94 61.7
ATR0582G167 Amborella trichopoda HOM05D007048 ORTHO05D008811 1.5e-23 113.6 118 52.5
SEGI_10153 Sequoiadendron giganteum HOM05D007048 ORTHO05D008811 2.5e-23 112.8 104 55.8
CDE05G0753 Ceratophyllum demersum HOM05D000512 ORTHO05D000861 9.1e-21 104.4 81 63.0
Nn1g04900 Nelumbo nucifera HOM05D007048 ORTHO05D008811 1.2e-20 104.0 73 69.9
Zm00001eb084850 Zea mays HOM05D007048 ORTHO05D008811 2.9e-19 99.4 117 49.6
FAN13G1437 Fragaria x ananassa HOM05D007048 ORTHO05D008811 1.1e-18 97.4 77 62.3
BcaB01g01606 Brassica carinata HOM05D007048 ORTHO05D008811 3.2e-18 95.9 84 58.3
AagrBONN_evm.TU.Sc2ySwM_362.2725 Anthoceros agrestis HOM05D007048 ORTHO05D008811 4.2e-18 95.5 121 43.8
Pp3c2_1780 Physcomitrium patens HOM05D007048 ORTHO05D008811 3.6e-17 92.4 99 48.5
BcaB05g23641 Brassica carinata HOM05D007048 ORTHO05D008811 6.9e-13 78.2 77 54.5
Mapoly0109s0028 Marchantia polymorpha HOM05D007048 ORTHO05D008811 3.4e-12 75.9 133 35.3
RcHm_v2.0_Chr5g0067941 Rosa chinensis HOM05D052544 ORTHO05D008811 3.2e-10 69.3 55 61.8
ECA233G3375 Erigeron canadensis HOM05D007048 ORTHO05D008811 2.1e-09 66.6 65 53.8
COL.COLO4_37252 Corchorus olitorius HOM05D007048 ORTHO05D008811 6.1e-09 65.1 89 47.2
Oeu009260.1 Olea europaea HOM05D007048 ORTHO05D008811 6.1e-09 65.1 39 79.5
ECA246G4512 Erigeron canadensis HOM05D007880 ORTHO05D003386 4.8e-06 55.5 63 52.4


User provided reference genes

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