Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G518.15 Capsicum annuum HOM05D000212 ORTHO05D005509 5.4e-113 411.0 207 100.0
CAN.G588.84 Capsicum annuum HOM05D000212 ORTHO05D005509 1.8e-55 219.9 258 52.7
Migut.N01323 Erythranthe guttata HOM05D000212 ORTHO05D005509 4.4e-54 215.3 189 63.0
SGA_v2.0_scaffold207G41924 Striga asiatica HOM05D000212 ORTHO05D005509 1.3e-50 203.8 231 54.5
Rhsim05G0056500 Rhododendron simsii HOM05D000212 ORTHO05D005509 1.7e-50 203.4 242 51.7
Nitab4.5_0003914g0050 Nicotiana tabacum HOM05D000212 ORTHO05D005509 2.9e-50 202.6 264 49.6
Nitab4.5_0000283g0400 Nicotiana tabacum HOM05D000212 ORTHO05D005509 3.8e-50 202.2 264 49.2
Peaxi162Scf00362g00646 Petunia axillaris HOM05D000212 ORTHO05D005509 8.0e-48 194.5 287 45.3
MBI08_g29141_MAGBIO Magnolia biondii HOM05D000212 ORTHO05D005509 3.0e-47 192.6 210 56.7
Solyc01g111630.3 Solanum lycopersicum HOM05D000212 ORTHO05D005509 6.8e-47 191.4 123 82.1
arahy.Tifrunner.gnm1.ann1.KVXN1E Arachis hypogaea HOM05D000212 ORTHO05D005509 8.9e-47 191.0 257 47.5
Sopen01g053670 Solanum pennellii HOM05D000212 ORTHO05D005509 8.9e-47 191.0 123 81.3
Ah.01g023040 Amaranthus hybridus HOM05D000212 ORTHO05D005509 2.6e-46 189.5 253 48.2
arahy.Tifrunner.gnm1.ann1.71EHKP Arachis hypogaea HOM05D000212 ORTHO05D005509 2.6e-46 189.5 217 52.1
FAN13G2675 Fragaria x ananassa HOM05D000212 ORTHO05D005509 3.4e-46 189.1 265 46.0
Lj5C178T12 Lonicera japonica HOM05D000212 ORTHO05D005509 4.4e-46 188.7 264 47.0
PGSC0003DMG400006186 Solanum tuberosum HOM05D000212 ORTHO05D005509 7.5e-46 188.0 123 79.7
vmacro17343 Vaccinium macrocarpon HOM05D000212 ORTHO05D005509 7.5e-46 188.0 277 45.5
Eucgr.I01423 Eucalyptus grandis HOM05D000212 ORTHO05D005509 1.3e-45 187.2 271 45.0
FvH4_5g30340 Fragaria vesca HOM05D000212 ORTHO05D005509 1.7e-45 186.8 271 45.0
HanXRQChr17g0544201 Helianthus annuus HOM05D000212 ORTHO05D005509 1.7e-45 186.8 271 45.0
Potri.004G175800 Populus trichocarpa HOM05D000212 ORTHO05D005509 1.7e-45 186.8 271 45.4
Ciclev10028639m.g Citrus clementina HOM05D000212 ORTHO05D005509 2.2e-45 186.4 271 46.1
Prupe.7G264000 Prunus persica HOM05D000212 ORTHO05D005509 2.2e-45 186.4 271 45.8
Dinv14109 Davidia involucrata HOM05D000212 ORTHO05D005509 2.8e-45 186.0 278 44.6
FAN08G0938 Fragaria x ananassa HOM05D000212 ORTHO05D005509 3.7e-45 185.7 243 47.3
Sabra04G0117700 Salix brachista HOM05D000212 ORTHO05D005509 3.7e-45 185.7 266 45.1
CANSAT25G2634 Cannabis sativa HOM05D000212 ORTHO05D005509 4.9e-45 185.3 271 45.8
Aqoxy6G02140 Aquilegia oxysepala HOM05D000212 ORTHO05D005509 6.3e-45 184.9 123 76.4
AUR62043666 Chenopodium quinoa HOM05D000212 ORTHO05D005509 6.3e-45 184.9 271 45.0
Cc09_g10170 Coffea canephora HOM05D000212 ORTHO05D005509 6.3e-45 184.9 273 45.4
GSVIVG01024012001 Vitis vinifera HOM05D000212 ORTHO05D005509 1.4e-44 183.7 271 45.4
BcaC08g46003 Brassica carinata HOM05D000212 ORTHO05D005509 1.8e-44 183.3 250 48.4
PSO541G1525 Papaver somniferum HOM05D000212 ORTHO05D005509 1.8e-44 183.3 123 77.2
TWI79G0672 Tripterygium wilfordii HOM05D000212 ORTHO05D005509 1.8e-44 183.3 271 45.4
AUR62013028 Chenopodium quinoa HOM05D000212 ORTHO05D005509 2.4e-44 183.0 271 45.0
ClCG02G004060 Citrullus lanatus HOM05D000212 ORTHO05D005509 2.4e-44 183.0 248 46.4
Manes.04G076300 Manihot esculenta HOM05D000212 ORTHO05D005509 2.4e-44 183.0 271 44.6
CSS0004363 Camellia sinensis var. sinensis HOM05D000212 ORTHO05D005509 3.1e-44 182.6 123 76.4
RcHm_v2.0_Chr7g0224761 Rosa chinensis HOM05D000212 ORTHO05D005509 3.1e-44 182.6 271 44.3
EL10Ac9g21375 Beta vulgaris HOM05D000212 ORTHO05D005509 4.1e-44 182.2 271 44.3
CAN.G1040.7 Capsicum annuum HOM05D000212 ORTHO05D005509 4.1e-44 182.2 268 45.9
Lsat_1_v5_gn_3_46860 Lactuca sativa HOM05D000212 ORTHO05D005509 5.4e-44 181.8 123 74.8
Medtr1g112510 Medicago truncatula HOM05D000212 ORTHO05D005509 5.4e-44 181.8 271 44.6
PSO675G7560 Papaver somniferum HOM05D000212 ORTHO05D005509 5.4e-44 181.8 123 76.4
unitig_899.g15611 Utricularia gibba HOM05D000212 ORTHO05D005509 5.4e-44 181.8 123 74.8
DCAR_022947 Daucus carota HOM05D000212 ORTHO05D005509 7.0e-44 181.4 271 43.5
Dinv41936 Davidia involucrata HOM05D000212 ORTHO05D005509 7.0e-44 181.4 123 75.6
Gohir.A01G169100 Gossypium hirsutum HOM05D000212 ORTHO05D005509 7.0e-44 181.4 271 45.0
Lalb_Chr21g0306931 Lupinus albus HOM05D000212 ORTHO05D005509 7.0e-44 181.4 271 44.3
Sed0017644 Sechium edule HOM05D000212 ORTHO05D005509 7.0e-44 181.4 271 43.5
VMungo0720G0733 Vigna mungo HOM05D000212 ORTHO05D005509 7.0e-44 181.4 271 44.3
Lalb_Chr06g0163651 Lupinus albus HOM05D000212 ORTHO05D005509 9.2e-44 181.0 271 43.9
Aa31LG11G2730 Aethionema arabicum HOM05D000212 ORTHO05D005509 1.2e-43 180.6 264 45.1
Sc08g0002900 Simmondsia chinensis HOM05D000212 ORTHO05D005509 1.2e-43 180.6 271 43.5
TAR381G1304 Trochodendron aralioides HOM05D000212 ORTHO05D005509 1.6e-43 180.3 123 75.6
Hma1.2p1_0163F.1_g072520 Hydrangea macrophylla HOM05D000212 ORTHO05D005509 2.0e-43 179.9 123 76.4
Oeu005702.1 Olea europaea HOM05D000212 ORTHO05D005509 2.0e-43 179.9 278 44.2
CsaV3_7G001060 Cucumis sativus L. HOM05D000212 ORTHO05D005509 2.7e-43 179.5 264 44.3
Os02g0101500 Oryza sativa ssp. japonica HOM05D000212 ORTHO05D005509 2.7e-43 179.5 271 44.6
Actinidia21457 Actinidia chinensis HOM05D000212 ORTHO05D005509 3.5e-43 179.1 123 74.0
Cpa.g.sc20.87 Carica papaya HOM05D000212 ORTHO05D005509 3.5e-43 179.1 265 43.8
Haze_02134 Corylus avellana HOM05D000212 ORTHO05D005509 3.5e-43 179.1 265 44.9
ECA246G1556 Erigeron canadensis HOM05D000212 ORTHO05D005509 4.5e-43 178.7 123 75.6
MD05G1122100 Malus domestica HOM05D000212 ORTHO05D005509 4.5e-43 178.7 123 74.0
Thecc.02G059100 Theobroma cacao HOM05D000212 ORTHO05D005509 4.5e-43 178.7 123 74.8
CiPaw.05G082600 Carya illinoinensis HOM05D000212 ORTHO05D005509 7.8e-43 177.9 123 76.4
Psat6g231880 Pisum sativum HOM05D000212 ORTHO05D005509 7.8e-43 177.9 271 43.5
SalBow7G0649 Salvia bowleyana HOM05D000212 ORTHO05D005509 1.0e-42 177.6 282 42.2
SalBow7G2155 Salvia bowleyana HOM05D000212 ORTHO05D005509 1.0e-42 177.6 282 42.2
TPR.G36351 Trifolium pratense HOM05D000212 ORTHO05D005509 1.0e-42 177.6 271 43.9
Cfa005249 Carpinus fangiana HOM05D000212 ORTHO05D005509 1.3e-42 177.2 123 74.8
COL.COLO4_17344 Corchorus olitorius HOM05D000212 ORTHO05D005509 1.3e-42 177.2 229 47.6
Glyma.10G281400 Glycine max HOM05D000212 ORTHO05D005509 1.7e-42 176.8 271 42.8
Duzib132G0804 Durio zibethinus HOM05D000212 ORTHO05D005509 2.3e-42 176.4 123 73.2
FAN18G0770 Fragaria x ananassa HOM05D000212 ORTHO05D005509 2.3e-42 176.4 263 43.7
Nn5g30798 Nelumbo nucifera HOM05D000212 ORTHO05D005509 2.3e-42 176.4 123 75.6
Phvul.007G019300 Phaseolus vulgaris HOM05D000212 ORTHO05D005509 2.3e-42 176.4 271 42.8
Lalb_Chr02g0143391 Lupinus albus HOM05D000212 ORTHO05D005509 2.9e-42 176.0 269 43.1
Prupe.8G166000 Prunus persica HOM05D000212 ORTHO05D005509 2.9e-42 176.0 123 73.2
Hund00191 Selenicereus undatus HOM05D000212 ORTHO05D005509 2.9e-42 176.0 123 72.4
Ah.01g008420 Amaranthus hybridus HOM05D000212 ORTHO05D005509 3.8e-42 175.6 247 45.3
Glyma.20G107800 Glycine max HOM05D000212 ORTHO05D005509 5.0e-42 175.3 271 43.2
THA.LOC104807808 Tarenaya hassleriana HOM05D000212 ORTHO05D005509 6.6e-42 174.9 267 43.8
QL11p050728 Quercus lobata HOM05D000212 ORTHO05D005509 1.1e-41 174.1 122 74.6
Gohir.D01G160100 Gossypium hirsutum HOM05D000212 ORTHO05D005509 2.5e-41 172.9 123 73.2
Gorai.002G198600 Gossypium raimondii HOM05D000212 ORTHO05D005509 2.5e-41 172.9 123 73.2
Hma1.2p1_0163F.1_g072510 Hydrangea macrophylla HOM05D000212 ORTHO05D005509 4.3e-41 172.2 116 75.9
Ca_11207_v3 Cicer arietinum L. HOM05D000212 ORTHO05D005509 7.3e-41 171.4 271 42.8
Sp5g23030 Schrenkiella parvula HOM05D000212 ORTHO05D005509 9.5e-41 171.0 123 71.5
BcaB03g15139 Brassica carinata HOM05D000212 ORTHO05D005509 1.2e-40 170.6 123 73.2
BcaB03g15394 Brassica carinata HOM05D000212 ORTHO05D005509 1.2e-40 170.6 123 73.2
Thhalv10018534m.g Eutrema salsugineum HOM05D000212 ORTHO05D005509 2.1e-40 169.9 123 72.4
Lj5g0017900 Lotus japonicus HOM05D000212 ORTHO05D005509 2.1e-40 169.9 263 43.0
Carub.0002s1449 Capsella rubella HOM05D000212 ORTHO05D005509 2.8e-40 169.5 123 71.5
CARHR060660 Cardamine hirsuta HOM05D000212 ORTHO05D005509 2.8e-40 169.5 123 71.5
MELO3C013350.2 Cucumis melo HOM05D000212 ORTHO05D005509 2.8e-40 169.5 158 60.8
CAN.G798.47 Capsicum annuum HOM05D000212 ORTHO05D005509 4.7e-40 168.7 117 76.9
Zm00001eb229250 Zea mays HOM05D000212 ORTHO05D005509 4.7e-40 168.7 263 42.6
BcaNung05109 Brassica carinata HOM05D000212 ORTHO05D005509 6.1e-40 168.3 123 72.4
THA.LOC104824763 Tarenaya hassleriana HOM05D000212 ORTHO05D005509 6.1e-40 168.3 123 69.9
AL2G26910 Arabidopsis lyrata HOM05D000212 ORTHO05D005509 1.0e-39 167.5 123 70.7
MSTRG.5454 Avicennia marina HOM05D000212 ORTHO05D005509 4.0e-39 165.6 123 68.3
AT1G68010 Arabidopsis thaliana HOM05D000212 ORTHO05D005509 5.2e-39 165.2 123 69.9
BcaC08g46227 Brassica carinata HOM05D000212 ORTHO05D005509 6.8e-39 164.9 129 68.2
A07p34520 Brassica napus HOM05D000212 ORTHO05D005509 1.2e-38 164.1 116 73.3
CDE04G1730 Ceratophyllum demersum HOM05D000212 ORTHO05D005509 1.2e-38 164.1 121 69.4
ATR0180G008 Amborella trichopoda HOM05D000212 ORTHO05D005509 2.0e-38 163.3 123 69.1
Pp3c19_20080 Physcomitrium patens HOM05D000212 ORTHO05D005509 2.0e-38 163.3 265 40.8
SMO145G0129 Selaginella moellendorffii HOM05D000212 ORTHO05D005509 2.6e-38 162.9 270 40.7
C06p42000 Brassica napus HOM05D000573 ORTHO05D005509 1.3e-37 160.6 116 71.6
BolC6t39228H Brassica oleracea HOM05D000212 ORTHO05D005509 1.3e-37 160.6 116 71.6
CDE02G3685 Ceratophyllum demersum HOM05D000212 ORTHO05D005509 2.2e-37 159.8 117 68.4
Mapoly0015s0044 Marchantia polymorpha HOM05D000212 ORTHO05D005509 1.6e-35 153.7 120 65.8
CBR_g49204 Chara braunii HOM05D000212 ORTHO05D005509 4.6e-35 152.1 116 65.5
Pp3c18_12500 Physcomitrium patens HOM05D000212 ORTHO05D005509 3.0e-34 149.4 265 38.9
AagrBONN_evm.TU.Sc2ySwM_117.3207 Anthoceros agrestis HOM05D000212 ORTHO05D005509 5.6e-33 145.2 117 64.1
HPP92_022190 Vanilla planifolia HOM05D000212 ORTHO05D005509 9.5e-33 144.4 111 64.9
Hund01460 Selenicereus undatus HOM05D000212 ORTHO05D005509 2.2e-29 133.3 161 54.0
CAN.G937.5 Capsicum annuum HOM05D000212 ORTHO05D005509 3.7e-29 132.5 245 39.6
CiPaw.06G121600 Carya illinoinensis HOM05D000212 ORTHO05D005509 3.7e-29 132.5 267 37.8
PGR142G1333 Punica granatum HOM05D000212 ORTHO05D005509 1.1e-28 131.0 223 41.3
SalBow7G0410 Salvia bowleyana HOM05D000212 ORTHO05D005509 1.9e-28 130.2 97 70.1
Atru.chr5.3324 Acer truncatum HOM05D000212 ORTHO05D005509 7.0e-28 128.3 121 55.4
Actinidia28255 Actinidia chinensis HOM05D000212 ORTHO05D005509 6.2e-24 115.2 87 69.0
Actinidia33560 Actinidia chinensis HOM05D000212 ORTHO05D005509 6.2e-24 115.2 87 69.0
Hund28420 Selenicereus undatus HOM05D000212 ORTHO05D005509 6.2e-24 115.2 116 54.3
Hund28422 Selenicereus undatus HOM05D000212 ORTHO05D005509 6.2e-24 115.2 116 54.3
CAN.G426.19 Capsicum annuum HOM05D000212 ORTHO05D005509 3.1e-23 112.8 78 74.4
PRCOL_00005045 Prasinoderma coloniale HOM05D000212 ORTHO05D005509 3.4e-22 109.4 266 33.1
Cre06.g295450 Chlamydomonas reinhardtii HOM05D000212 ORTHO05D005509 5.8e-22 108.6 266 33.8
SalBow1G2308 Salvia bowleyana HOM05D000212 ORTHO05D005509 4.9e-21 105.5 199 36.2
CAN.G1181.28 Capsicum annuum HOM05D000212 ORTHO05D005509 1.9e-20 103.6 69 76.8
Cpa.g.sc20.88 Carica papaya HOM05D000212 ORTHO05D005509 1.6e-19 100.5 101 52.5
CAN.G1305.30 Capsicum annuum HOM05D000212 ORTHO05D005509 2.7e-19 99.8 68 75.0
Actinidia26083 Actinidia chinensis HOM05D000212 ORTHO05D056122 3.6e-16 89.4 53 75.5
MBI15_g00259_MAGBIO Magnolia biondii HOM05D000212 ORTHO05D005509 1.2e-14 84.3 62 69.4
SEGI_26169 Sequoiadendron giganteum HOM05D000212 ORTHO05D005509 3.8e-13 79.3 58 72.4
TAR633G2032 Trochodendron aralioides HOM05D000212 ORTHO05D005509 1.1e-12 77.8 55 72.7
TPR.G2480 Trifolium pratense HOM05D000001 ORTHO05D000003 6.2e-08 62.0 39 82.1
RcHm_v2.0_Chr7g0224721 Rosa chinensis HOM05D000212 ORTHO05D005509 1.8e-07 60.5 45 64.4
SEGI_20354 Sequoiadendron giganteum HOM05D000212 ORTHO05D000001 2.4e-07 60.1 42 73.8
QL08p051306 Quercus lobata HOM05D000866 ORTHO05D000673 5.3e-07 58.9 96 36.5
PSO478G1269 Papaver somniferum HOM05D000866 ORTHO05D000673 9.0e-07 58.2 147 29.3
SEGI_30200 Sequoiadendron giganteum HOM05D000866 ORTHO05D000673 9.0e-07 58.2 75 44.0
SEGI_40797 Sequoiadendron giganteum HOM05D000866 ORTHO05D000673 9.0e-07 58.2 75 44.0
Sc02g0002350 Simmondsia chinensis HOM05D000866 ORTHO05D000673 1.2e-06 57.8 61 45.9
CARHR060650 Cardamine hirsuta HOM05D000212 ORTHO05D005509 1.5e-06 57.4 39 76.9
Os01g0228600 Oryza sativa ssp. japonica HOM05D000866 ORTHO05D000673 1.5e-06 57.4 67 43.3
Zm00001eb338070 Zea mays HOM05D000866 ORTHO05D000673 1.5e-06 57.4 60 45.0
CsaV3_3G009450 Cucumis sativus L. HOM05D000866 ORTHO05D000673 2.6e-06 56.6 113 35.4
AagrBONN_evm.TU.Sc2ySwM_368.680 Anthoceros agrestis HOM05D000866 ORTHO05D000673 3.4e-06 56.2 126 31.0
BcaNung07151 Brassica carinata HOM05D000866 ORTHO05D000673 3.4e-06 56.2 74 39.2
C06p28770 Brassica napus HOM05D000866 ORTHO05D000673 3.4e-06 56.2 74 39.2
THA.LOC104800424 Tarenaya hassleriana HOM05D000866 ORTHO05D000673 3.4e-06 56.2 73 41.1
BcaC08g45274 Brassica carinata HOM05D000866 ORTHO05D000673 4.4e-06 55.8 67 41.8
Ah.05g175670 Amaranthus hybridus HOM05D000866 ORTHO05D000673 5.8e-06 55.5 83 34.9
A07p26380 Brassica napus HOM05D000866 ORTHO05D000673 5.8e-06 55.5 74 39.2
BraA07t30282Z Brassica rapa HOM05D000866 ORTHO05D000673 5.8e-06 55.5 74 39.2
BolC6t38047H Brassica oleracea HOM05D000866 ORTHO05D000673 7.6e-06 55.1 74 37.8
Nn2g11703 Nelumbo nucifera HOM05D000866 ORTHO05D000673 7.6e-06 55.1 73 39.7
Psat5g298160 Pisum sativum HOM05D000866 ORTHO05D000673 7.6e-06 55.1 73 42.5
Aa31LG1G27100 Aethionema arabicum HOM05D005142 ORTHO05D006519 9.9e-06 54.7 59 44.1
AagrBONN_evm.TU.Sc2ySwM_117.4042 Anthoceros agrestis HOM05D000866 ORTHO05D000673 9.9e-06 54.7 66 42.4
Cfa026488 Carpinus fangiana HOM05D001181 ORTHO05D000673 9.9e-06 54.7 92 34.8
Os04g0106400 Oryza sativa ssp. japonica HOM05D000866 ORTHO05D000673 9.9e-06 54.7 56 46.4
Peaxi162Scf00988g00324 Petunia axillaris HOM05D000866 ORTHO05D000673 9.9e-06 54.7 59 44.1
SEGI_31086 Sequoiadendron giganteum HOM05D000866 ORTHO05D000673 9.9e-06 54.7 72 44.4


User provided reference genes

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