Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G49.22 Capsicum annuum HOM05D004097 ORTHO05D043419 1.7e-75 285.8 134 100.0
CAN.G1548.3 Capsicum annuum HOM05D004097 ORTHO05D005352 6.1e-41 171.0 88 93.2
CAN.G311.73 Capsicum annuum HOM05D004097 ORTHO05D005352 6.1e-41 171.0 88 93.2
Nitab4.5_0002174g0010 Nicotiana tabacum HOM05D004097 ORTHO05D005352 1.7e-38 162.9 88 84.1
Sopen05g010470 Solanum pennellii HOM05D004097 ORTHO05D005352 2.9e-38 162.2 88 86.4
Solyc05g015220.3 Solanum lycopersicum HOM05D004097 ORTHO05D005352 8.3e-38 160.6 88 85.2
Nitab4.5_0005179g0010 Nicotiana tabacum HOM05D004097 ORTHO05D005352 5.4e-37 157.9 88 81.8
Peaxi162Scf00128g01140 Petunia axillaris HOM05D004097 ORTHO05D005352 3.5e-36 155.2 88 81.8
SalBow2G2696 Salvia bowleyana HOM05D004097 ORTHO05D005352 3.2e-29 132.1 86 74.4
C06p38670 Brassica napus HOM05D004097 ORTHO05D005352 4.1e-29 131.7 87 74.7
QL03p053766 Quercus lobata HOM05D004097 ORTHO05D005352 5.4e-29 131.3 92 67.4
CiPaw.05G112000 Carya illinoinensis HOM05D004097 ORTHO05D005352 1.6e-28 129.8 86 69.8
Lj6C825T6 Lonicera japonica HOM05D004097 ORTHO05D005352 2.0e-28 129.4 86 69.8
Haze_12391 Corylus avellana HOM05D004097 ORTHO05D005352 4.6e-28 128.3 86 69.8
MBI11_g07450_MAGBIO Magnolia biondii HOM05D004097 ORTHO05D005352 4.6e-28 128.3 86 73.3
Thecc.02G212500 Theobroma cacao HOM05D004097 ORTHO05D005352 4.6e-28 128.3 86 69.8
TWI36G0618 Tripterygium wilfordii HOM05D004097 ORTHO05D005352 4.6e-28 128.3 86 70.9
MSTRG.7991 Avicennia marina HOM05D004097 ORTHO05D005352 6.0e-28 127.9 86 73.3
BcaB03g15361 Brassica carinata HOM05D004097 ORTHO05D005352 6.0e-28 127.9 87 71.3
CSS0021321 Camellia sinensis var. sinensis HOM05D004097 ORTHO05D005352 6.0e-28 127.9 86 66.3
AL2G26080 Arabidopsis lyrata HOM05D004097 ORTHO05D005352 7.8e-28 127.5 87 71.3
FAN17G1448 Fragaria x ananassa HOM05D004097 ORTHO05D005352 1.3e-27 126.7 96 61.5
BolC6t38956H Brassica oleracea HOM05D004097 ORTHO05D005352 1.7e-27 126.3 87 70.1
Cfa009333 Carpinus fangiana HOM05D004097 ORTHO05D005352 1.7e-27 126.3 86 68.6
RcHm_v2.0_Chr4g0430631 Rosa chinensis HOM05D004097 ORTHO05D005352 2.3e-27 125.9 96 60.4
CSS0033535 Camellia sinensis var. sinensis HOM05D004097 ORTHO05D005352 3.0e-27 125.6 86 65.1
Cc00_g13540 Coffea canephora HOM05D004097 ORTHO05D005352 3.0e-27 125.6 85 67.1
Glyma.05G146500 Glycine max HOM05D004097 ORTHO05D005352 3.0e-27 125.6 94 66.0
Sp5g22470 Schrenkiella parvula HOM05D004097 ORTHO05D005352 3.0e-27 125.6 87 70.1
GSVIVG01010441001 Vitis vinifera HOM05D004097 ORTHO05D005352 3.0e-27 125.6 86 66.3
arahy.Tifrunner.gnm1.ann1.7LT28F Arachis hypogaea HOM05D004097 ORTHO05D005352 3.9e-27 125.2 96 62.5
EL10Ac6g13480 Beta vulgaris HOM05D004097 ORTHO05D005352 3.9e-27 125.2 92 62.0
BraA07t30877Z Brassica rapa HOM05D004097 ORTHO05D005352 3.9e-27 125.2 87 70.1
Ciclev10030695m.g Citrus clementina HOM05D004097 ORTHO05D005352 3.9e-27 125.2 86 66.3
A07p32530 Brassica napus HOM05D004097 ORTHO05D005352 5.0e-27 124.8 87 70.1
Eucgr.B03480 Eucalyptus grandis HOM05D004097 ORTHO05D005352 5.0e-27 124.8 96 61.5
Oeu019032.1 Olea europaea HOM05D004097 ORTHO05D005352 5.0e-27 124.8 86 66.3
Prupe.1G228800 Prunus persica HOM05D004097 ORTHO05D005352 5.0e-27 124.8 86 68.6
Atru.chr11.2303 Acer truncatum HOM05D004097 ORTHO05D005352 8.6e-27 124.0 86 66.3
Carub.0002s1382 Capsella rubella HOM05D004097 ORTHO05D005352 8.6e-27 124.0 87 69.0
COL.COLO4_20377 Corchorus olitorius HOM05D004097 ORTHO05D005352 8.6e-27 124.0 96 61.5
Glyma.08G103233 Glycine max HOM05D004097 ORTHO05D005352 8.6e-27 124.0 94 66.0
Aa31sc781G10 Aethionema arabicum HOM05D004097 ORTHO05D005352 1.1e-26 123.6 98 63.3
AT1G67490 Arabidopsis thaliana HOM05D004097 ORTHO05D005352 1.1e-26 123.6 87 70.1
MD16G1117400 Malus domestica HOM05D004097 ORTHO05D005352 1.1e-26 123.6 86 67.4
PGR102G2071 Punica granatum HOM05D004097 ORTHO05D005352 1.5e-26 123.2 86 66.3
TWI18G1202 Tripterygium wilfordii HOM05D004097 ORTHO05D005352 1.5e-26 123.2 86 68.6
TAR629G3065 Trochodendron aralioides HOM05D004097 ORTHO05D005352 1.5e-26 123.2 86 68.6
CARHR060060 Cardamine hirsuta HOM05D004097 ORTHO05D005352 1.9e-26 122.9 87 69.0
MD13G1116700 Malus domestica HOM05D004097 ORTHO05D005352 1.9e-26 122.9 86 67.4
arahy.Tifrunner.gnm1.ann1.11CB4V Arachis hypogaea HOM05D004097 ORTHO05D005352 2.5e-26 122.5 96 61.5
ClCG11G013780 Citrullus lanatus HOM05D004097 ORTHO05D005352 2.5e-26 122.5 111 56.8
FAN07G0057 Fragaria x ananassa HOM05D004097 ORTHO05D005352 2.5e-26 122.5 86 65.1
VMungo0251G0768 Vigna mungo HOM05D004097 ORTHO05D005352 2.5e-26 122.5 93 64.5
Nn4g22358 Nelumbo nucifera HOM05D004097 ORTHO05D005352 3.3e-26 122.1 86 66.3
Potri.010G059000 Populus trichocarpa HOM05D004097 ORTHO05D005352 3.3e-26 122.1 86 66.3
Rhsim12G0102000 Rhododendron simsii HOM05D004097 ORTHO05D005352 3.3e-26 122.1 88 63.6
Dinv14824 Davidia involucrata HOM05D004097 ORTHO05D005352 4.3e-26 121.7 85 67.1
FvH4_4g23960 Fragaria vesca HOM05D004097 ORTHO05D005352 4.3e-26 121.7 96 60.4
FAN12G2099 Fragaria x ananassa HOM05D004097 ORTHO05D005352 4.3e-26 121.7 96 60.4
Hma1.2p1_0668F.1_g200000 Hydrangea macrophylla HOM05D004097 ORTHO05D005352 4.3e-26 121.7 86 65.1
Manes.13G018100 Manihot esculenta HOM05D004097 ORTHO05D005352 4.3e-26 121.7 86 67.4
SGA_v2.0_scaffold130G34253 Striga asiatica HOM05D004097 ORTHO05D005352 4.3e-26 121.7 86 70.9
CsaV3_5G030370 Cucumis sativus L. HOM05D004097 ORTHO05D005352 5.6e-26 121.3 86 65.1
Migut.K00711 Erythranthe guttata HOM05D004097 ORTHO05D005352 5.6e-26 121.3 86 70.9
Gohir.A01G155000 Gossypium hirsutum HOM05D004097 ORTHO05D005352 5.6e-26 121.3 86 65.1
Phvul.002G174800 Phaseolus vulgaris HOM05D004097 ORTHO05D005352 5.6e-26 121.3 93 63.4
Thhalv10018104m.g Eutrema salsugineum HOM05D004097 ORTHO05D005352 7.3e-26 120.9 100 60.0
AT1G24320 Arabidopsis thaliana HOM05D004097 ORTHO05D005352 9.5e-26 120.6 87 67.8
Medtr8g080360 Medicago truncatula HOM05D004097 ORTHO05D005352 9.5e-26 120.6 94 62.8
DCAR_031191 Daucus carota HOM05D004097 ORTHO05D005352 1.2e-25 120.2 86 64.0
MELO3C011876.2 Cucumis melo HOM05D004097 ORTHO05D005352 1.6e-25 119.8 86 65.1
ECA246G4064 Erigeron canadensis HOM05D004097 ORTHO05D005352 1.6e-25 119.8 86 67.4
Medtr8g080290 Medicago truncatula HOM05D004097 ORTHO05D005352 1.6e-25 119.8 94 60.6
Sabra10G0046600 Salix brachista HOM05D004097 ORTHO05D005352 1.6e-25 119.8 86 66.3
Hund25455 Selenicereus undatus HOM05D004097 ORTHO05D005352 1.6e-25 119.8 92 60.9
Actinidia20697 Actinidia chinensis HOM05D004097 ORTHO05D005352 2.1e-25 119.4 86 65.1
Aqoxy5G03417 Aquilegia oxysepala HOM05D004097 ORTHO05D005352 2.1e-25 119.4 86 64.0
TPR.G17087 Trifolium pratense HOM05D004097 ORTHO05D005352 2.8e-25 119.0 94 61.7
DCAR_026468 Daucus carota HOM05D004097 ORTHO05D005352 3.6e-25 118.6 105 57.1
Gohir.D01G154900 Gossypium hirsutum HOM05D004097 ORTHO05D005352 3.6e-25 118.6 86 64.0
Gorai.002G191800 Gossypium raimondii HOM05D004097 ORTHO05D005352 3.6e-25 118.6 86 64.0
THA.LOC104807884 Tarenaya hassleriana HOM05D004097 ORTHO05D005352 4.7e-25 118.2 86 67.4
HPP92_023192 Vanilla planifolia HOM05D004097 ORTHO05D005352 4.7e-25 118.2 86 62.8
VMungo0251G3103 Vigna mungo HOM05D004097 ORTHO05D005352 4.7e-25 118.2 99 59.6
AL1G40600 Arabidopsis lyrata HOM05D004097 ORTHO05D005352 6.2e-25 117.9 87 64.4
Duzib251G0245 Durio zibethinus HOM05D004097 ORTHO05D005352 6.2e-25 117.9 95 60.0
PSO478G3686 Papaver somniferum HOM05D004097 ORTHO05D005352 6.2e-25 117.9 86 66.3
Lj4g0020055 Lotus japonicus HOM05D004097 ORTHO05D005352 8.1e-25 117.5 88 64.8
Sed0007371 Sechium edule HOM05D004097 ORTHO05D005352 8.1e-25 117.5 86 66.3
Duzib248G1376 Durio zibethinus HOM05D004097 ORTHO05D005352 1.1e-24 117.1 96 58.3
HanXRQChr17g0540261 Helianthus annuus HOM05D004097 ORTHO05D005352 1.1e-24 117.1 86 64.0
PSO017G2193 Papaver somniferum HOM05D004097 ORTHO05D005352 1.1e-24 117.1 86 66.3
Sp1g23450 Schrenkiella parvula HOM05D004097 ORTHO05D005352 1.1e-24 117.1 86 66.3
Ah.02g130710 Amaranthus hybridus HOM05D004097 ORTHO05D005352 1.8e-24 116.3 86 61.6
Carub.0001s2575 Capsella rubella HOM05D004097 ORTHO05D005352 1.8e-24 116.3 86 65.1
ATR0561G059 Amborella trichopoda HOM05D004097 ORTHO05D005352 2.3e-24 115.9 85 63.5
AUR62024129 Chenopodium quinoa HOM05D004097 ORTHO05D005352 2.3e-24 115.9 86 61.6
BcaB03g13996 Brassica carinata HOM05D004097 ORTHO05D005352 3.1e-24 115.5 86 65.1
Os01g0921200 Oryza sativa ssp. japonica HOM05D004097 ORTHO05D005352 3.1e-24 115.5 86 62.8
CARHR026770 Cardamine hirsuta HOM05D004097 ORTHO05D005352 4.0e-24 115.2 87 63.2
Lalb_Chr13g0294221 Lupinus albus HOM05D004097 ORTHO05D005352 5.2e-24 114.8 88 64.8
AUR62005598 Chenopodium quinoa HOM05D004097 ORTHO05D005352 6.8e-24 114.4 86 60.5
Psat7g078160 Pisum sativum HOM05D004097 ORTHO05D005352 8.9e-24 114.0 94 59.6
CANSAT01G0794 Cannabis sativa HOM05D004097 ORTHO05D005352 1.2e-23 113.6 86 64.0
Ca_18045_v3 Cicer arietinum L. HOM05D004097 ORTHO05D005352 1.2e-23 113.6 86 62.8
Glyma.05G146400 Glycine max HOM05D004097 ORTHO05D005352 1.2e-23 113.6 96 59.4
Zm00001eb143210 Zea mays HOM05D004097 ORTHO05D005352 2.0e-23 112.8 86 61.6
Ca_18044_v3 Cicer arietinum L. HOM05D004097 ORTHO05D005352 2.6e-23 112.5 94 57.4
TPR.G17069 Trifolium pratense HOM05D004097 ORTHO05D005352 2.6e-23 112.5 94 57.4
Ca_18046_v3 Cicer arietinum L. HOM05D004097 ORTHO05D005352 3.4e-23 112.1 94 57.4
Thhalv10006835m.g Eutrema salsugineum HOM05D004097 ORTHO05D005352 3.4e-23 112.1 86 65.1
A07p12040 Brassica napus HOM05D004097 ORTHO05D005352 5.8e-23 111.3 86 62.8
BcaC06g35272 Brassica carinata HOM05D004097 ORTHO05D005352 7.5e-23 110.9 86 64.0
C07p17980 Brassica napus HOM05D004097 ORTHO05D005352 7.5e-23 110.9 86 64.0
BolC7t42308H Brassica oleracea HOM05D004097 ORTHO05D005352 7.5e-23 110.9 86 64.0
Lalb_Chr13g0294231 Lupinus albus HOM05D004097 ORTHO05D005352 7.5e-23 110.9 86 61.6
Psat7g078280 Pisum sativum HOM05D004097 ORTHO05D005352 7.5e-23 110.9 94 58.5
PSO675G1898 Papaver somniferum HOM05D004097 ORTHO05D005352 1.3e-22 110.2 86 61.6
Lsat_1_v5_gn_3_29780 Lactuca sativa HOM05D004097 ORTHO05D005352 2.2e-22 109.4 86 61.6
Aa31LG7G6710 Aethionema arabicum HOM05D004097 ORTHO05D005352 4.9e-22 108.2 87 59.8
SEGI_39835 Sequoiadendron giganteum HOM05D004097 ORTHO05D005352 2.4e-21 105.9 86 59.3
BcaB03g13994 Brassica carinata HOM05D004097 ORTHO05D005352 3.2e-21 105.5 86 61.6
Cpa.g.sc43.15 Carica papaya HOM05D004097 ORTHO05D043419 9.2e-21 104.0 72 68.1
BcaB02g06725 Brassica carinata HOM05D004097 ORTHO05D005352 2.7e-20 102.4 102 50.0
CBR_g11887 Chara braunii HOM05D004097 ORTHO05D005352 2.7e-20 102.4 118 46.6
Sc04g0010030 Simmondsia chinensis HOM05D004097 ORTHO05D005352 4.6e-20 101.7 68 72.1
Pp3c11_13660 Physcomitrium patens HOM05D004097 ORTHO05D005352 6.6e-19 97.8 97 49.5
C05p05580 Brassica napus HOM05D004097 ORTHO05D005352 1.5e-18 96.7 105 47.6
SMO358G0259 Selaginella moellendorffii HOM05D004097 ORTHO05D005352 1.9e-18 96.3 102 50.0
AagrBONN_evm.TU.Sc2ySwM_344.2645 Anthoceros agrestis HOM05D004097 ORTHO05D005352 5.6e-18 94.7 86 54.7
Sp1g06290 Schrenkiella parvula HOM05D004097 ORTHO05D005352 9.5e-18 94.0 89 49.4
BolC5t29329H Brassica oleracea HOM05D004097 ORTHO05D005352 1.6e-17 93.2 86 51.2
Cre13.g579734 Chlamydomonas reinhardtii HOM05D004097 ORTHO05D005352 1.6e-17 93.2 99 45.5
CDE05G0715 Ceratophyllum demersum HOM05D004097 ORTHO05D005352 2.1e-17 92.8 83 54.2
BraA10t42875Z Brassica rapa HOM05D004097 ORTHO05D108425 2.8e-17 92.4 86 51.2
SHI17952 Sapria himalayana HOM05D004097 ORTHO05D005352 5.2e-16 88.2 67 64.2
A10p06090 Brassica napus HOM05D004097 ORTHO05D005352 1.2e-15 87.0 86 47.7
Mapoly0071s0095 Marchantia polymorpha HOM05D004097 ORTHO05D005352 2.0e-15 86.3 94 47.9
unitig_22.g6408 Utricularia gibba HOM05D004097 ORTHO05D005352 2.0e-07 59.7 59 54.2


User provided reference genes

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