Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G484.107 Capsicum annuum HOM05D008922 ORTHO05D010978 1.7e-72 275.8 129 100.0
Gorai.002G146700 Gossypium raimondii HOM05D008922 ORTHO05D010978 3.6e-46 188.3 114 79.8
Gohir.1Z049566 Gossypium hirsutum HOM05D008922 ORTHO05D010978 5.7e-44 181.0 106 81.1
Solyc05g023725.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 7.5e-44 180.6 129 71.3
Solyc00g500033.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 8.2e-43 177.2 99 84.8
Solyc00g500078.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 8.2e-43 177.2 99 84.8
Solyc00g500129.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 8.2e-43 177.2 99 84.8
Solyc00g500199.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 8.2e-43 177.2 99 84.8
Solyc00g500151.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 1.8e-42 176.0 99 83.8
Solyc00g500328.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 5.3e-42 174.5 97 85.6
Gohir.A12G138620 Gossypium hirsutum HOM05D008922 ORTHO05D010978 1.3e-40 169.9 97 81.4
PGSC0003DMG400004211 Solanum tuberosum HOM05D001387 ORTHO05D001250 2.2e-40 169.1 96 83.3
RhsimPtG0002400 Rhododendron simsii HOM05D008922 ORTHO05D010978 4.2e-39 164.9 106 74.5
ScUNg0000580 Simmondsia chinensis HOM05D001387 ORTHO05D010978 4.2e-39 164.9 106 75.5
HanXRQChr00c0585g0576281 Helianthus annuus HOM05D008922 ORTHO05D010978 7.2e-39 164.1 94 83.0
Gohir.D04G160150 Gossypium hirsutum HOM05D008922 ORTHO05D010978 9.4e-39 163.7 106 74.5
Gorai.005G093900 Gossypium raimondii HOM05D008922 ORTHO05D010978 2.3e-37 159.1 106 74.5
Gohir.D02G149550 Gossypium hirsutum HOM05D008922 ORTHO05D010978 6.8e-37 157.5 101 74.3
Migut.D02168 Erythranthe guttata HOM05D008922 ORTHO05D010978 8.8e-37 157.1 94 79.8
Solyc10g012213.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 1.4e-34 149.8 85 83.5
Ah.10g028480 Amaranthus hybridus HOM05D002965 ORTHO05D010183 1.8e-34 149.4 89 78.7
Oeu045555.1 Olea europaea HOM05D008922 ORTHO05D010978 1.7e-32 142.9 104 69.2
Migut.A01147 Erythranthe guttata HOM05D008922 ORTHO05D010978 8.6e-32 140.6 79 82.3
Eucgr.J02736 Eucalyptus grandis HOM05D008922 ORTHO05D010978 8.6e-32 140.6 101 71.3
Gorai.007G083900 Gossypium raimondii HOM05D008922 ORTHO05D010978 1.5e-28 129.8 83 73.5
Gorai.011G182500 Gossypium raimondii HOM05D008922 ORTHO05D010978 3.1e-26 122.1 102 62.7
SEGI_05822 Sequoiadendron giganteum HOM05D000216 ORTHO05D001131 5.4e-26 121.3 102 61.8
SEGI_05748 Sequoiadendron giganteum HOM05D000216 ORTHO05D001131 5.6e-23 111.3 87 62.1
HPP92_028403 Vanilla planifolia HOM05D008922 ORTHO05D010978 1.2e-20 103.6 67 73.1
HPP92_028411 Vanilla planifolia HOM05D008922 ORTHO05D010978 1.2e-20 103.6 67 73.1
HPP92_028427 Vanilla planifolia HOM05D008922 ORTHO05D010978 1.2e-20 103.6 67 73.1
Gorai.012G032000 Gossypium raimondii HOM05D008922 ORTHO05D010978 2.0e-20 102.8 79 67.1
HanXRQChr13g0413491 Helianthus annuus HOM05D005034 ORTHO05D006234 3.2e-18 95.5 58 77.6
HanXRQChr12g0369781 Helianthus annuus HOM05D008922 ORTHO05D010978 2.7e-17 92.4 52 80.8
Medtr4g076920 Medicago truncatula HOM05D008922 ORTHO05D010978 3.3e-15 85.5 45 88.9
Oeu028760.1 Olea europaea HOM05D001387 ORTHO05D001250 4.3e-15 85.1 50 78.0
HanXRQChr00c0554g0575681 Helianthus annuus HOM05D008922 ORTHO05D010978 1.1e-13 80.5 48 77.1
Oeu028750.1 Olea europaea HOM05D008922 ORTHO05D010978 4.0e-13 78.6 53 69.8
SGA_v2.0_scaffold477G52163 Striga asiatica HOM05D008922 ORTHO05D010978 5.8e-12 74.7 44 77.3
HanXRQChr08g0235731 Helianthus annuus HOM05D000445 ORTHO05D010978 1.7e-11 73.2 40 82.5
arahy.Tifrunner.gnm1.ann1.9U8SPX Arachis hypogaea HOM05D008922 ORTHO05D010978 2.2e-11 72.8 83 50.6
EL10As9g23921 Beta vulgaris HOM05D008922 ORTHO05D010978 6.4e-11 71.2 41 78.0
Sc15g0001780 Simmondsia chinensis HOM05D001387 ORTHO05D001250 1.6e-09 66.6 42 73.8
Sopen01g027160 Solanum pennellii HOM05D008922 ORTHO05D010978 2.0e-09 66.2 39 79.5


User provided reference genes

Program Settings