Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G481.59 Capsicum annuum HOM05D004333 ORTHO05D005363 2.0e-74 282.3 144 100.0
CAN.G481.56 Capsicum annuum HOM05D004333 ORTHO05D005363 1.6e-71 272.7 141 98.6
Sopen03g022440 Solanum pennellii HOM05D004333 ORTHO05D005363 2.0e-58 229.2 122 95.1
Nitab4.5_0008197g0020 Nicotiana tabacum HOM05D004333 ORTHO05D005363 4.5e-58 228.0 122 93.4
Nitab4.5_0010367g0010 Nicotiana tabacum HOM05D004333 ORTHO05D005363 3.8e-57 224.9 122 91.8
Peaxi162Scf00740g00426 Petunia axillaris HOM05D004333 ORTHO05D005363 1.8e-54 216.1 122 88.5
Lj1C1024G7 Lonicera japonica HOM05D004333 ORTHO05D005363 8.3e-52 207.2 122 82.8
Migut.F00177 Erythranthe guttata HOM05D004333 ORTHO05D005363 2.0e-50 202.6 124 79.0
Potri.012G020000 Populus trichocarpa HOM05D004333 ORTHO05D005363 4.6e-50 201.4 122 81.1
Sabra12G0012900 Salix brachista HOM05D004333 ORTHO05D005363 4.6e-50 201.4 122 81.1
Actinidia08674 Actinidia chinensis HOM05D004333 ORTHO05D005363 7.8e-50 200.7 122 82.0
CSS0025528 Camellia sinensis var. sinensis HOM05D004333 ORTHO05D005363 7.8e-50 200.7 122 81.1
CSS0015753 Camellia sinensis var. sinensis HOM05D004333 ORTHO05D005363 1.3e-49 199.9 122 80.3
vmacro06413 Vaccinium macrocarpon HOM05D004333 ORTHO05D005363 1.3e-49 199.9 122 81.1
Dinv32109 Davidia involucrata HOM05D004333 ORTHO05D005363 1.7e-49 199.5 122 79.5
Potri.015G008500 Populus trichocarpa HOM05D004333 ORTHO05D005363 1.7e-49 199.5 122 79.5
Rhsim03G0212200 Rhododendron simsii HOM05D004333 ORTHO05D005363 1.7e-49 199.5 122 81.1
Sabra15G0006500 Salix brachista HOM05D004333 ORTHO05D005363 1.7e-49 199.5 122 79.5
Hund21026 Selenicereus undatus HOM05D004333 ORTHO05D005363 2.3e-49 199.1 122 79.5
Haze_00260 Corylus avellana HOM05D004333 ORTHO05D005363 5.0e-49 198.0 122 78.7
CiPaw.05G200800 Carya illinoinensis HOM05D004333 ORTHO05D005363 6.6e-49 197.6 122 77.9
Lsat_1_v5_gn_9_49400 Lactuca sativa HOM05D004333 ORTHO05D005363 6.6e-49 197.6 122 79.5
TAR633G0098 Trochodendron aralioides HOM05D004333 ORTHO05D005363 8.6e-49 197.2 122 77.0
GSVIVG01038603001 Vitis vinifera HOM05D004333 ORTHO05D005363 8.6e-49 197.2 121 79.3
Psat5g074840 Pisum sativum HOM05D004333 ORTHO05D005363 1.1e-48 196.8 122 78.7
PGR142G3828 Punica granatum HOM05D004333 ORTHO05D005363 1.1e-48 196.8 122 77.0
Medtr3g091940 Medicago truncatula HOM05D004333 ORTHO05D005363 1.5e-48 196.4 122 78.7
TPR.G33633 Trifolium pratense HOM05D004333 ORTHO05D005363 1.5e-48 196.4 122 78.7
AUR62010404 Chenopodium quinoa HOM05D004333 ORTHO05D005363 1.9e-48 196.1 122 77.9
Ciclev10000006m.g Citrus clementina HOM05D004333 ORTHO05D005363 1.9e-48 196.1 122 80.3
Thecc.03G204400 Theobroma cacao HOM05D004333 ORTHO05D005363 1.9e-48 196.1 122 77.9
Cfa016195 Carpinus fangiana HOM05D004333 ORTHO05D005363 2.5e-48 195.7 122 77.9
Duzib068G0008 Durio zibethinus HOM05D004333 ORTHO05D005363 2.5e-48 195.7 122 77.9
AUR62016813 Chenopodium quinoa HOM05D004333 ORTHO05D005363 3.3e-48 195.3 122 76.2
Sc19g0000760 Simmondsia chinensis HOM05D004333 ORTHO05D005363 3.3e-48 195.3 122 79.5
Ca_16734_v3 Cicer arietinum L. HOM05D004333 ORTHO05D005363 4.3e-48 194.9 122 77.9
Gohir.D12G248500 Gossypium hirsutum HOM05D004333 ORTHO05D005363 4.3e-48 194.9 122 77.9
Gorai.008G266500 Gossypium raimondii HOM05D004333 ORTHO05D005363 4.3e-48 194.9 122 77.9
Atru.chr12.2311 Acer truncatum HOM05D004333 ORTHO05D005363 7.3e-48 194.1 122 77.9
COL.COLO4_16822 Corchorus olitorius HOM05D004333 ORTHO05D005363 9.5e-48 193.7 122 77.0
Phvul.009G048100 Phaseolus vulgaris HOM05D004333 ORTHO05D005363 9.5e-48 193.7 122 77.9
QL11p010725 Quercus lobata HOM05D004333 ORTHO05D005363 9.5e-48 193.7 122 77.9
Gohir.A12G247800 Gossypium hirsutum HOM05D004333 ORTHO05D005363 1.2e-47 193.4 122 77.0
Lalb_Chr08g0240011 Lupinus albus HOM05D004333 ORTHO05D005363 1.2e-47 193.4 122 77.0
arahy.Tifrunner.gnm1.ann1.F5KWPZ Arachis hypogaea HOM05D004333 ORTHO05D005363 1.6e-47 193.0 122 77.0
arahy.Tifrunner.gnm1.ann1.SMAV3X Arachis hypogaea HOM05D004333 ORTHO05D005363 1.6e-47 193.0 122 77.0
Cc02_g01170 Coffea canephora HOM05D004333 ORTHO05D005363 1.6e-47 193.0 122 77.9
Lj1g0003347 Lotus japonicus HOM05D004333 ORTHO05D005363 1.6e-47 193.0 122 77.0
MD01G1225300 Malus domestica HOM05D004333 ORTHO05D005363 1.6e-47 193.0 122 75.4
Prupe.2G315300 Prunus persica HOM05D004333 ORTHO05D005363 1.6e-47 193.0 122 74.6
Ah.01g018970 Amaranthus hybridus HOM05D004333 ORTHO05D005363 2.1e-47 192.6 122 77.0
MD07G1295800 Malus domestica HOM05D004333 ORTHO05D005363 2.1e-47 192.6 122 76.2
CANSAT21G1061 Cannabis sativa HOM05D004333 ORTHO05D005363 2.8e-47 192.2 122 74.6
ECA232G2446 Erigeron canadensis HOM05D004333 ORTHO05D005363 2.8e-47 192.2 122 77.0
CARHR189090 Cardamine hirsuta HOM05D004333 ORTHO05D005363 4.7e-47 191.4 122 75.4
AT5G24350 Arabidopsis thaliana HOM05D004333 ORTHO05D005363 6.2e-47 191.0 122 74.6
DCAR_020346 Daucus carota HOM05D004333 ORTHO05D005363 6.2e-47 191.0 122 78.7
Psat1g135480 Pisum sativum HOM05D004333 ORTHO05D005363 6.2e-47 191.0 122 77.0
AL6G35880 Arabidopsis lyrata HOM05D004333 ORTHO05D005363 8.0e-47 190.7 122 74.6
MBI06_g06689_MAGBIO Magnolia biondii HOM05D004333 ORTHO05D005363 8.0e-47 190.7 121 75.2
FAN01G1860 Fragaria x ananassa HOM05D004333 ORTHO05D005363 1.1e-46 190.3 122 74.6
FAN06G4186 Fragaria x ananassa HOM05D004333 ORTHO05D005363 1.1e-46 190.3 122 74.6
FAN20G1934 Fragaria x ananassa HOM05D004333 ORTHO05D005363 1.1e-46 190.3 122 74.6
TWI39G1232 Tripterygium wilfordii HOM05D004333 ORTHO05D005363 1.1e-46 190.3 122 76.2
Aa31LG11G3630 Aethionema arabicum HOM05D004333 ORTHO05D005363 1.4e-46 189.9 122 76.2
RcHm_v2.0_Chr1g0381961 Rosa chinensis HOM05D004333 ORTHO05D005363 1.4e-46 189.9 122 74.6
SGA_v2.0_scaffold18G08437 Striga asiatica HOM05D004333 ORTHO05D005363 1.4e-46 189.9 122 76.2
FvH4_7g32380 Fragaria vesca HOM05D004333 ORTHO05D005363 1.8e-46 189.5 122 74.6
SalBow4G2088 Salvia bowleyana HOM05D004333 ORTHO05D005363 1.8e-46 189.5 122 75.4
Sp2g22970 Schrenkiella parvula HOM05D004333 ORTHO05D005363 1.8e-46 189.5 122 75.4
VMungo1309G3147 Vigna mungo HOM05D004333 ORTHO05D005363 1.8e-46 189.5 122 76.2
MSTRG.27005 Avicennia marina HOM05D004333 ORTHO05D005363 2.3e-46 189.1 122 76.2
FAN03G1314 Fragaria x ananassa HOM05D004333 ORTHO05D005363 2.3e-46 189.1 122 74.6
Glyma.04G232700 Glycine max HOM05D004333 ORTHO05D005363 3.1e-46 188.7 122 76.2
Glyma.06G132300 Glycine max HOM05D004333 ORTHO05D005363 3.1e-46 188.7 122 76.2
HanXRQChr04g0107121 Helianthus annuus HOM05D004333 ORTHO05D005363 3.1e-46 188.7 122 74.6
Carub.0006s2218 Capsella rubella HOM05D004333 ORTHO05D005363 4.0e-46 188.3 122 73.8
Manes.01G037200 Manihot esculenta HOM05D004333 ORTHO05D005363 4.0e-46 188.3 122 75.4
A06p35170 Brassica napus HOM05D004333 ORTHO05D005363 5.2e-46 188.0 122 74.6
BraA06t26437Z Brassica rapa HOM05D004333 ORTHO05D005363 5.2e-46 188.0 122 74.6
PSO063G3257 Papaver somniferum HOM05D004333 ORTHO05D005363 5.2e-46 188.0 122 74.6
BcaNung01227 Brassica carinata HOM05D004333 ORTHO05D005363 6.8e-46 187.6 122 75.4
Aqoxy5G04259 Aquilegia oxysepala HOM05D004333 ORTHO05D005363 8.9e-46 187.2 122 75.4
EL10Ac9g21652 Beta vulgaris HOM05D004333 ORTHO05D005363 1.2e-45 186.8 122 73.8
Thhalv10003502m.g Eutrema salsugineum HOM05D004333 ORTHO05D005363 1.2e-45 186.8 122 73.8
FAN10G0319 Fragaria x ananassa HOM05D004333 ORTHO05D005363 1.2e-45 186.8 122 73.0
FAN10G1078 Fragaria x ananassa HOM05D004333 ORTHO05D005363 1.2e-45 186.8 122 73.0
Sed0018682 Sechium edule HOM05D004333 ORTHO05D005363 1.2e-45 186.8 122 76.2
ClCG03G011440 Citrullus lanatus HOM05D004333 ORTHO05D005363 2.0e-45 186.0 122 76.2
C07p43390 Brassica napus HOM05D004333 ORTHO05D005363 2.6e-45 185.7 122 73.8
BolC7t44866H Brassica oleracea HOM05D004333 ORTHO05D005363 2.6e-45 185.7 122 73.8
Nn7g38041 Nelumbo nucifera HOM05D004333 ORTHO05D005363 4.4e-45 184.9 122 73.0
MELO3C010103.2 Cucumis melo HOM05D004333 ORTHO05D005363 1.3e-44 183.3 122 76.2
CsaV3_1G044960 Cucumis sativus L. HOM05D004333 ORTHO05D005363 1.3e-44 183.3 122 76.2
Gohir.D09G180800 Gossypium hirsutum HOM05D004333 ORTHO05D005363 2.2e-44 182.6 122 72.1
Gorai.006G202800 Gossypium raimondii HOM05D004333 ORTHO05D005363 2.2e-44 182.6 122 72.1
ATR0697G293 Amborella trichopoda HOM05D004333 ORTHO05D005363 3.7e-44 181.8 122 73.8
Gohir.A09G185800 Gossypium hirsutum HOM05D004333 ORTHO05D005363 8.3e-44 180.6 122 71.3
unitig_0.g2452 Utricularia gibba HOM05D004333 ORTHO05D005363 3.2e-43 178.7 122 68.9
HPP92_002817 Vanilla planifolia HOM05D004333 ORTHO05D005363 4.6e-42 174.9 122 68.9
THA.LOC104798907 Tarenaya hassleriana HOM05D004333 ORTHO05D005363 1.0e-41 173.7 122 71.3
Psat0s2221g0080 Pisum sativum HOM05D004333 ORTHO05D005363 1.7e-41 172.9 109 75.2
Eucgr.D00250 Eucalyptus grandis HOM05D004333 ORTHO05D005363 3.9e-41 171.8 108 77.8
Zm00001eb359130 Zea mays HOM05D004333 ORTHO05D005363 3.9e-41 171.8 122 70.5
CDE02G3740 Ceratophyllum demersum HOM05D004333 ORTHO05D005363 5.0e-41 171.4 122 66.4
Psat0s3076g0080 Pisum sativum HOM05D004333 ORTHO05D001713 1.5e-40 169.9 109 75.2
SHI08279 Sapria himalayana HOM05D004333 ORTHO05D005363 1.9e-40 169.5 126 67.5
Aa31LG11G3970 Aethionema arabicum HOM05D004333 ORTHO05D005363 3.1e-38 162.2 102 74.5
Solyc03g082680.4 Solanum lycopersicum HOM05D004333 ORTHO05D005363 5.1e-33 144.8 78 96.2
Mapoly0143s0007 Marchantia polymorpha HOM05D004333 ORTHO05D005363 1.2e-31 140.2 122 57.4
SMO356G0059 Selaginella moellendorffii HOM05D004333 ORTHO05D005363 1.4e-30 136.7 122 50.8
AagrBONN_evm.TU.Sc2ySwM_362.1567 Anthoceros agrestis HOM05D004333 ORTHO05D005363 7.1e-27 124.4 103 59.2
CBR_g48777 Chara braunii HOM05D004333 ORTHO05D005363 1.5e-24 116.7 123 42.3
Pp3c1_3140 Physcomitrium patens HOM05D004333 ORTHO05D005363 2.1e-23 112.8 122 43.4
SEGI_24760 Sequoiadendron giganteum HOM05D004333 ORTHO05D005363 1.1e-22 110.5 78 70.5


User provided reference genes

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