Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G481.32 Capsicum annuum HOM05D007331 ORTHO05D009273 1.2e-89 333.2 172 100.0
Sopen03g022780 Solanum pennellii HOM05D007331 ORTHO05D009273 8.9e-85 317.0 172 94.2
PGSC0003DMG400018546 Solanum tuberosum HOM05D007331 ORTHO05D009273 4.9e-83 311.2 172 94.2
Nitab4.5_0005491g0010 Nicotiana tabacum HOM05D007331 ORTHO05D009273 7.0e-82 307.4 172 93.6
Solyc03g082970.4 Solanum lycopersicum HOM05D007331 ORTHO05D009273 2.3e-80 302.4 172 91.3
Nitab4.5_0000548g0030 Nicotiana tabacum HOM05D007331 ORTHO05D008325 1.2e-65 253.4 146 93.2
Dinv35349 Davidia involucrata HOM05D007331 ORTHO05D009273 2.4e-58 229.2 148 79.7
Cc02_g01360 Coffea canephora HOM05D007331 ORTHO05D009273 1.0e-56 223.8 161 73.3
Migut.F00197 Erythranthe guttata HOM05D007331 ORTHO05D009273 5.1e-56 221.5 168 69.6
Peaxi162Scf00740g00023 Petunia axillaris HOM05D007331 ORTHO05D009273 1.1e-53 213.8 138 81.9
MSTRG.8644 Avicennia marina HOM05D007331 ORTHO05D009273 3.4e-52 208.8 170 64.7
GSVIVG01010322001 Vitis vinifera HOM05D007331 ORTHO05D009273 4.2e-50 201.8 170 67.6
Gorai.008G267700 Gossypium raimondii HOM05D007331 ORTHO05D009273 2.1e-49 199.5 149 69.8
Cfa016463 Carpinus fangiana HOM05D007331 ORTHO05D009273 3.5e-49 198.7 172 62.8
COL.COLO4_16795 Corchorus olitorius HOM05D007331 ORTHO05D009273 7.9e-49 197.6 146 70.5
PSO063G7177 Papaver somniferum HOM05D007331 ORTHO05D009273 7.9e-49 197.6 170 64.1
Gohir.A12G248800 Gossypium hirsutum HOM05D007331 ORTHO05D009273 1.0e-48 197.2 159 66.7
PSO170G4979 Papaver somniferum HOM05D007331 ORTHO05D009273 1.0e-48 197.2 171 63.7
PGR142G4299 Punica granatum HOM05D007331 ORTHO05D009273 6.7e-48 194.5 195 57.4
Eucgr.K00396 Eucalyptus grandis HOM05D007331 ORTHO05D009273 1.1e-47 193.7 170 61.8
Atru.chr12.2246 Acer truncatum HOM05D007331 ORTHO05D009273 1.9e-47 193.0 170 64.7
Medtr3g491820 Medicago truncatula HOM05D007331 ORTHO05D009273 3.3e-47 192.2 164 64.0
Phvul.009G050900 Phaseolus vulgaris HOM05D007331 ORTHO05D009273 3.3e-47 192.2 131 74.0
Glyma.04G234000 Glycine max HOM05D007331 ORTHO05D009273 4.3e-47 191.8 131 74.0
Lalb_Chr08g0240101 Lupinus albus HOM05D007331 ORTHO05D009273 2.1e-46 189.5 126 77.8
ClCG05G009050 Citrullus lanatus HOM05D007331 ORTHO05D009273 2.8e-46 189.1 157 63.1
Glyma.06G130800 Glycine max HOM05D007331 ORTHO05D009273 2.8e-46 189.1 131 73.3
Sabra15G0008800 Salix brachista HOM05D007331 ORTHO05D009273 3.7e-46 188.7 171 64.3
CiPaw.05G198500 Carya illinoinensis HOM05D007331 ORTHO05D009273 6.2e-46 188.0 128 75.0
Manes.05G191300 Manihot esculenta HOM05D007331 ORTHO05D009273 6.2e-46 188.0 162 64.2
Potri.015G010700 Populus trichocarpa HOM05D007331 ORTHO05D009273 1.4e-45 186.8 171 63.7
RcHm_v2.0_Chr1g0381631 Rosa chinensis HOM05D007331 ORTHO05D009273 1.8e-45 186.4 147 68.0
Aqoxy5G04308 Aquilegia oxysepala HOM05D007331 ORTHO05D009273 3.1e-45 185.7 140 67.1
Prupe.2G313600 Prunus persica HOM05D007331 ORTHO05D009273 4.0e-45 185.3 128 72.7
MD01G1223100 Malus domestica HOM05D007331 ORTHO05D009273 5.3e-45 184.9 170 61.8
CANSAT21G1988 Cannabis sativa HOM05D007331 ORTHO05D009273 6.9e-45 184.5 170 62.4
ATR0730G104 Amborella trichopoda HOM05D007331 ORTHO05D009273 9.0e-45 184.1 158 63.3
Duzib068G0233 Durio zibethinus HOM05D007331 ORTHO05D009273 9.0e-45 184.1 120 75.8
CSS0016118 Camellia sinensis var. sinensis HOM05D007331 ORTHO05D009273 1.2e-44 183.7 108 81.5
SGA_v2.0_scaffold192G40527 Striga asiatica HOM05D007331 ORTHO05D009273 1.2e-44 183.7 170 54.7
MELO3C019371.2 Cucumis melo HOM05D000442 ORTHO05D007032 1.5e-44 183.3 150 64.0
DCAR_014548 Daucus carota HOM05D007331 ORTHO05D009273 1.5e-44 183.3 174 58.0
CsaV3_3G019730 Cucumis sativus L. HOM05D007331 ORTHO05D009273 2.0e-44 183.0 170 60.0
Psat5g075920 Pisum sativum HOM05D007331 ORTHO05D009273 3.4e-44 182.2 124 75.8
QL09p007955 Quercus lobata HOM05D007331 ORTHO05D009273 4.5e-44 181.8 173 60.1
Ciclev10022582m.g Citrus clementina HOM05D007331 ORTHO05D009273 5.8e-44 181.4 170 61.2
Sed0023714 Sechium edule HOM05D007331 ORTHO05D009273 5.8e-44 181.4 145 64.1
FvH4_7g32020 Fragaria vesca HOM05D007331 ORTHO05D009273 7.6e-44 181.0 169 60.9
Cpa.g.sc3.102 Carica papaya HOM05D007331 ORTHO05D009273 1.3e-43 180.3 108 81.5
FAN01G2673 Fragaria x ananassa HOM05D007331 ORTHO05D009273 1.3e-43 180.3 169 60.4
AUR62006072 Chenopodium quinoa HOM05D007331 ORTHO05D009273 2.2e-43 179.5 166 56.6
Ca_16722_v3 Cicer arietinum L. HOM05D007331 ORTHO05D009273 2.9e-43 179.1 148 64.9
Haze_00231 Corylus avellana HOM05D007331 ORTHO05D009273 3.8e-43 178.7 201 56.7
THA.LOC104798905 Tarenaya hassleriana HOM05D007331 ORTHO05D009273 6.4e-43 177.9 167 57.5
CDE04G0075 Ceratophyllum demersum HOM05D007331 ORTHO05D009273 1.1e-42 177.2 173 56.1
Nn5g27567 Nelumbo nucifera HOM05D007331 ORTHO05D009273 1.1e-42 177.2 107 80.4
Thecc.03G201300 Theobroma cacao HOM05D007331 ORTHO05D009273 1.9e-42 176.4 108 79.6
TPR.G33621 Trifolium pratense HOM05D007331 ORTHO05D009273 4.2e-42 175.3 165 57.6
Lj1g0000536 Lotus japonicus HOM05D007331 ORTHO05D009273 2.7e-41 172.6 141 64.5
VMungo1309G2222 Vigna mungo HOM05D007331 ORTHO05D009273 1.0e-40 170.6 109 76.1
CARHR189150 Cardamine hirsuta HOM05D007331 ORTHO05D009273 1.3e-40 170.2 150 58.7
BcaNung01223 Brassica carinata HOM05D007331 ORTHO05D009273 1.8e-40 169.9 133 64.7
Thhalv10005048m.g Eutrema salsugineum HOM05D007331 ORTHO05D009273 1.8e-40 169.9 149 59.1
HPP92_020186 Vanilla planifolia HOM05D007331 ORTHO05D009273 1.8e-40 169.9 174 56.9
C07p43430 Brassica napus HOM05D007331 ORTHO05D009273 2.3e-40 169.5 133 64.7
BolC7t44869H Brassica oleracea HOM05D007331 ORTHO05D009273 2.3e-40 169.5 133 64.7
BraA06t26434Z Brassica rapa HOM05D007331 ORTHO05D009273 2.3e-40 169.5 133 64.7
Carub.0006s2210 Capsella rubella HOM05D007331 ORTHO05D009273 2.3e-40 169.5 159 56.6
Actinidia34232 Actinidia chinensis HOM05D007331 ORTHO05D009273 3.0e-40 169.1 163 60.1
Rhsim03G0210700 Rhododendron simsii HOM05D007331 ORTHO05D009273 3.0e-40 169.1 173 52.6
Sp2g23030 Schrenkiella parvula HOM05D007331 ORTHO05D009273 3.0e-40 169.1 169 56.8
AL6G35810 Arabidopsis lyrata HOM05D007331 ORTHO05D009273 6.7e-40 167.9 136 62.5
AT5G24314 Arabidopsis thaliana HOM05D007331 ORTHO05D009273 8.7e-40 167.5 136 61.8
A06p35140 Brassica napus HOM05D007331 ORTHO05D009273 8.7e-40 167.5 169 56.2
Ah.07g205440 Amaranthus hybridus HOM05D007331 ORTHO05D009273 2.1e-38 162.9 107 72.9
AUR62035555 Chenopodium quinoa HOM05D007331 ORTHO05D009273 2.8e-38 162.5 106 73.6
Hund11645 Selenicereus undatus HOM05D007331 ORTHO05D009273 8.2e-38 161.0 162 54.3
FAN06G3260 Fragaria x ananassa HOM05D007331 ORTHO05D009273 1.4e-37 160.2 98 78.6
FAN10G2274 Fragaria x ananassa HOM05D007331 ORTHO05D009273 1.4e-37 160.2 98 77.6
FAN10G3896 Fragaria x ananassa HOM05D007331 ORTHO05D009273 1.4e-37 160.2 98 77.6
EL10Ac3g05257 Beta vulgaris HOM05D007331 ORTHO05D009273 1.8e-37 159.8 165 55.8
unitig_92.g28248 Utricularia gibba HOM05D007331 ORTHO05D009273 1.8e-37 159.8 110 70.9
TWI39G0006 Tripterygium wilfordii HOM05D007331 ORTHO05D009273 2.4e-37 159.5 135 63.0
COL.COLO4_06879 Corchorus olitorius HOM05D007331 ORTHO05D009273 4.5e-36 155.2 103 76.7
Oeu023663.2 Olea europaea HOM05D007331 ORTHO05D009273 4.5e-36 155.2 131 64.9
Aa31LG11G3570 Aethionema arabicum HOM05D007331 ORTHO05D009273 1.3e-35 153.7 100 72.0
arahy.Tifrunner.gnm1.ann1.E13FL8 Arachis hypogaea HOM05D007331 ORTHO05D009273 1.3e-35 153.7 131 64.1
Os01g0705300 Oryza sativa ssp. japonica HOM05D007331 ORTHO05D009273 4.9e-35 151.8 158 49.4
MBI06_g33738_MAGBIO Magnolia biondii HOM05D007331 ORTHO05D009273 1.1e-34 150.6 99 77.8
arahy.Tifrunner.gnm1.ann1.US9W38 Arachis hypogaea HOM05D007331 ORTHO05D009273 1.6e-33 146.7 150 56.7
Zm00001eb361120 Zea mays HOM05D007331 ORTHO05D009273 2.7e-33 146.0 146 50.7
Zm00001eb155420 Zea mays HOM05D007331 ORTHO05D009273 6.0e-33 144.8 117 57.3
HanXRQChr07g0206431 Helianthus annuus HOM05D007331 ORTHO05D009273 6.7e-32 141.4 159 53.5
Lsat_1_v5_gn_2_136240 Lactuca sativa HOM05D007331 ORTHO05D009273 3.3e-31 139.0 161 50.3
Lj3P902T29 Lonicera japonica HOM05D007331 ORTHO05D009273 1.3e-30 137.1 87 73.6
ECA238G3436 Erigeron canadensis HOM05D007331 ORTHO05D009273 3.7e-30 135.6 118 63.6
vmacro06396 Vaccinium macrocarpon HOM05D007331 ORTHO05D009273 5.3e-29 131.7 92 66.3
Thecc.05G118900 Theobroma cacao HOM05D007331 ORTHO05D009273 3.9e-16 89.0 105 50.5
Actinidia08666 Actinidia chinensis HOM05D007331 ORTHO05D009273 5.1e-16 88.6 92 58.7
arahy.Tifrunner.gnm1.ann1.2NJ5KY Arachis hypogaea HOM05D007331 ORTHO05D009273 1.9e-10 70.1 67 56.7
AagrBONN_evm.TU.Sc2ySwM_368.2672 Anthoceros agrestis HOM05D007331 ORTHO05D009273 2.1e-09 66.6 101 32.7
Mapoly0073s0014 Marchantia polymorpha HOM05D007331 ORTHO05D009273 1.0e-08 64.3 133 32.3


User provided reference genes

Program Settings