Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G479.33 Capsicum annuum HOM05D001674 ORTHO05D008599 0.0e+00 2981.8 1617 100.0
Sopen03g034510 Solanum pennellii HOM05D001674 ORTHO05D008599 0.0e+00 2615.9 1634 89.0
Nitab4.5_0004511g0020 Nicotiana tabacum HOM05D001674 ORTHO05D008599 0.0e+00 2440.2 1633 83.0
PGSC0003DMG400024553 Solanum tuberosum HOM05D001674 ORTHO05D008599 0.0e+00 2258.4 1399 90.1
Solyc03g115510.3 Solanum lycopersicum HOM05D001674 ORTHO05D008599 0.0e+00 1900.9 1207 89.6
Peaxi162Scf00201g00021 Petunia axillaris HOM05D001674 ORTHO05D008599 0.0e+00 1824.7 1207 86.0
Cc00_g02250 Coffea canephora HOM05D001674 ORTHO05D008599 0.0e+00 1525.8 1736 55.8
vmacro17586 Vaccinium macrocarpon HOM05D001674 ORTHO05D008599 0.0e+00 1514.2 1690 55.3
Oeu032213.1 Olea europaea HOM05D001674 ORTHO05D008599 0.0e+00 1501.5 1720 57.5
TAR629G0913 Trochodendron aralioides HOM05D001674 ORTHO05D008599 0.0e+00 1493.0 1744 55.2
Hma1.2p1_0060F.1_g033350 Hydrangea macrophylla HOM05D001674 ORTHO05D008599 0.0e+00 1492.2 1747 56.1
QL10p018629 Quercus lobata HOM05D001674 ORTHO05D008599 0.0e+00 1471.8 1718 56.2
Atru.chr9.280 Acer truncatum HOM05D001674 ORTHO05D008599 0.0e+00 1464.1 1716 55.4
Nitab4.5_0020510g0010 Nicotiana tabacum HOM05D001674 ORTHO05D008599 0.0e+00 1463.7 987 86.2
MSTRG.9602 Avicennia marina HOM05D001674 ORTHO05D008599 0.0e+00 1461.0 1693 56.9
Thecc.03G096700 Theobroma cacao HOM05D001674 ORTHO05D008599 0.0e+00 1454.9 1722 55.1
Ciclev10018469m.g Citrus clementina HOM05D001674 ORTHO05D008599 0.0e+00 1437.9 1706 55.5
Actinidia04849 Actinidia chinensis HOM05D001674 ORTHO05D008599 0.0e+00 1428.3 1429 61.5
COL.COLO4_36885 Corchorus olitorius HOM05D001674 ORTHO05D008599 0.0e+00 1427.5 1710 54.9
Migut.D01672 Erythranthe guttata HOM05D001674 ORTHO05D008599 0.0e+00 1427.2 1669 53.3
Nn4g23353 Nelumbo nucifera HOM05D001674 ORTHO05D008599 0.0e+00 1424.5 1740 52.4
GSVIVG01007917001 Vitis vinifera HOM05D001674 ORTHO05D008599 0.0e+00 1424.5 1658 54.0
DCAR_031671 Daucus carota HOM05D001674 ORTHO05D008599 0.0e+00 1415.6 1698 53.2
Duzib068G0733 Durio zibethinus HOM05D001674 ORTHO05D008599 0.0e+00 1414.8 1718 54.4
Gorai.007G039000 Gossypium raimondii HOM05D001674 ORTHO05D008599 0.0e+00 1403.3 1723 53.9
Gohir.A11G032900 Gossypium hirsutum HOM05D001674 ORTHO05D008599 0.0e+00 1389.0 1702 54.1
SalBow7G3498 Salvia bowleyana HOM05D001674 ORTHO05D008599 0.0e+00 1375.9 1721 52.6
Manes.06G087600 Manihot esculenta HOM05D001674 ORTHO05D008599 0.0e+00 1370.9 1804 51.7
CANSAT80G0851 Cannabis sativa HOM05D001674 ORTHO05D008599 0.0e+00 1363.6 1720 53.7
PGR083G0537 Punica granatum HOM05D001674 ORTHO05D008599 0.0e+00 1353.6 1715 51.4
Prupe.5G200400 Prunus persica HOM05D001674 ORTHO05D008599 0.0e+00 1347.4 1721 53.1
Sed0027646 Sechium edule HOM05D001674 ORTHO05D008599 0.0e+00 1343.6 1711 52.0
TWI15G1152 Tripterygium wilfordii HOM05D001674 ORTHO05D008599 0.0e+00 1335.9 1713 53.2
Lalb_Chr13g0302981 Lupinus albus HOM05D001674 ORTHO05D008599 0.0e+00 1331.6 1712 51.2
Glyma.17G076400 Glycine max HOM05D001674 ORTHO05D008599 0.0e+00 1330.5 1711 52.3
Aqoxy3G00452 Aquilegia oxysepala HOM05D001674 ORTHO05D008599 0.0e+00 1324.7 1723 51.3
HanXRQChr04g0107361 Helianthus annuus HOM05D001674 ORTHO05D008599 0.0e+00 1323.1 1616 52.9
AUR62021608 Chenopodium quinoa HOM05D001674 ORTHO05D008599 0.0e+00 1318.1 1702 50.9
MELO3C017205.2 Cucumis melo HOM05D001674 ORTHO05D008599 0.0e+00 1317.8 1726 51.9
AUR62008489 Chenopodium quinoa HOM05D001674 ORTHO05D008599 0.0e+00 1315.4 1722 50.6
Hund02613 Selenicereus undatus HOM05D001674 ORTHO05D008599 0.0e+00 1311.6 1686 51.2
TPR.G2046 Trifolium pratense HOM05D001674 ORTHO05D008599 0.0e+00 1310.4 1700 52.4
VMungo1215G3312 Vigna mungo HOM05D001674 ORTHO05D008599 0.0e+00 1308.9 1720 51.5
CsaV3_1G002700 Cucumis sativus L. HOM05D001674 ORTHO05D008599 0.0e+00 1308.1 1724 51.0
Glyma.05G023300 Glycine max HOM05D001674 ORTHO05D008599 0.0e+00 1307.0 1713 52.0
Lj4g0011824 Lotus japonicus HOM05D001674 ORTHO05D008599 0.0e+00 1305.4 1732 51.8
ECA247G0462 Erigeron canadensis HOM05D001674 ORTHO05D008599 0.0e+00 1305.0 1643 52.0
Phvul.003G186700 Phaseolus vulgaris HOM05D001674 ORTHO05D008599 0.0e+00 1305.0 1730 51.3
arahy.Tifrunner.gnm1.ann1.MMN4BF Arachis hypogaea HOM05D001674 ORTHO05D008599 0.0e+00 1300.8 1719 50.9
Medtr4g109230 Medicago truncatula HOM05D001674 ORTHO05D008599 0.0e+00 1298.5 1694 52.7
ClCG06G015860 Citrullus lanatus HOM05D001674 ORTHO05D008599 0.0e+00 1297.0 1715 51.1
Sabra12G0048200 Salix brachista HOM05D001674 ORTHO05D008599 0.0e+00 1294.3 1911 47.6
SGA_v2.0_scaffold3G01735 Striga asiatica HOM05D001674 ORTHO05D008599 0.0e+00 1288.1 1681 50.0
Psat4g048680 Pisum sativum HOM05D001674 ORTHO05D008599 0.0e+00 1287.7 1701 52.2
Rhsim08G0149500 Rhododendron simsii HOM05D001674 ORTHO05D008599 0.0e+00 1287.3 1471 55.1
RcHm_v2.0_Chr7g0182421 Rosa chinensis HOM05D001674 ORTHO05D008599 0.0e+00 1284.2 1712 51.8
Lsat_1_v5_gn_1_13760 Lactuca sativa HOM05D001674 ORTHO05D008599 0.0e+00 1280.8 1607 52.0
Eucgr.B00566 Eucalyptus grandis HOM05D001674 ORTHO05D008599 0.0e+00 1276.2 1429 58.4
FvH4_5g14340 Fragaria vesca HOM05D001674 ORTHO05D008599 0.0e+00 1271.1 1704 51.3
FAN08G0876 Fragaria x ananassa HOM05D001674 ORTHO05D008599 0.0e+00 1270.0 1730 51.0
FAN18G2329 Fragaria x ananassa HOM05D001674 ORTHO05D008599 0.0e+00 1266.5 1704 51.2
FAN13G3105 Fragaria x ananassa HOM05D001674 ORTHO05D008599 0.0e+00 1263.8 1704 51.1
Ca_21793_v3 Cicer arietinum L. HOM05D001674 ORTHO05D008599 0.0e+00 1260.7 1587 53.3
PSO478G4640 Papaver somniferum HOM05D001674 ORTHO05D008599 0.0e+00 1243.8 1613 51.7
Haze_07676 Corylus avellana HOM05D001674 ORTHO05D008599 0.0e+00 1239.6 1502 56.2
Potri.012G066900 Populus trichocarpa HOM05D001674 ORTHO05D008599 0.0e+00 1217.2 1603 52.2
PSO017G4474 Papaver somniferum HOM05D001674 ORTHO05D008599 0.0e+00 1212.6 1791 48.5
Gohir.D11G036200 Gossypium hirsutum HOM05D001674 ORTHO05D008599 0.0e+00 1146.7 1215 59.7
ATR0064G082 Amborella trichopoda HOM05D001674 ORTHO05D008599 0.0e+00 1131.7 1366 54.5
Lj5A106T70 Lonicera japonica HOM05D001674 ORTHO05D008599 0.0e+00 1108.6 1223 57.4
CiPaw.11G049600 Carya illinoinensis HOM05D001674 ORTHO05D008599 0.0e+00 1105.5 1299 57.0
Sc12g0006570 Simmondsia chinensis HOM05D001674 ORTHO05D008599 0.0e+00 1100.5 1264 56.3
Cpa.g.sc94.3 Carica papaya HOM05D001674 ORTHO05D008599 0.0e+00 1098.2 1229 58.7
Dinv10682 Davidia involucrata HOM05D001674 ORTHO05D008599 0.0e+00 1092.0 951 65.1
SEGI_10628 Sequoiadendron giganteum HOM05D001674 ORTHO05D008599 5.4e-301 1038.5 1729 44.0
Actinidia09243 Actinidia chinensis HOM05D001674 ORTHO05D008599 3.5e-292 1009.2 940 62.4
Zm00001eb108430 Zea mays HOM05D001674 ORTHO05D008599 9.6e-290 1001.1 1462 49.1
MD14G1208500 Malus domestica HOM05D001674 ORTHO05D008599 1.4e-288 997.3 1221 54.3
Dinv38777 Davidia involucrata HOM05D001674 ORTHO05D008599 9.4e-269 931.4 817 64.1
Ah.02g113890 Amaranthus hybridus HOM05D001674 ORTHO05D008599 3.2e-261 906.4 1420 47.3
unitig_37.g12722 Utricularia gibba HOM05D001674 ORTHO05D008599 2.0e-250 870.5 1101 51.2
SMO117G0045 Selaginella moellendorffii HOM05D001674 ORTHO05D008599 4.2e-245 852.8 1195 49.9
Pp3c11_9170 Physcomitrium patens HOM05D001674 ORTHO05D008599 3.8e-238 829.7 1709 39.7
Os06g0235300 Oryza sativa ssp. japonica HOM05D001674 ORTHO05D008599 4.0e-179 633.6 1033 47.0
AagrBONN_evm.TU.Sc2ySwM_228.3354 Anthoceros agrestis HOM05D001674 ORTHO05D008599 1.0e-169 602.4 868 44.2
Nitab4.5_0002881g0120 Nicotiana tabacum HOM05D001674 ORTHO05D008599 2.3e-166 591.3 426 72.8
Dinv10683 Davidia involucrata HOM05D001674 ORTHO05D008599 3.0e-142 511.1 721 48.4
CDE07G0117 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 2.7e-135 488.0 540 55.0
Pp3c1_9760 Physcomitrium patens HOM05D001674 ORTHO05D008599 9.4e-128 463.0 1103 35.3
CDE07G0766 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 2.0e-125 455.3 801 42.8
Actinidia09244 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.6e-119 435.6 719 43.8
Dinv38778 Davidia involucrata HOM05D001674 ORTHO05D008599 2.0e-93 349.0 687 43.2
Actinidia09199 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.2e-82 313.2 692 37.0
Ah.02g113880 Amaranthus hybridus HOM05D001674 ORTHO05D008599 1.0e-73 283.5 265 56.2
PGSC0003DMG400006818 Solanum tuberosum HOM05D001674 ORTHO05D008599 1.4e-67 263.1 159 86.8
Lj5A106T69 Lonicera japonica HOM05D001674 ORTHO05D008599 1.0e-65 256.9 495 40.2
MD14G1208300 Malus domestica HOM05D001674 ORTHO05D008599 1.0e-57 230.3 239 54.0
Rhsim08G0149700 Rhododendron simsii HOM05D001674 ORTHO05D008599 8.7e-57 227.3 220 55.9
Actinidia09209 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.8e-41 176.4 165 58.8
CDE07G0655 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 2.5e-40 172.6 160 57.5
unitig_37.g12721 Utricularia gibba HOM05D001674 ORTHO05D008599 2.5e-40 172.6 209 47.4
PRCOL_00000483 Prasinoderma coloniale HOM05D001674 ORTHO05D008599 1.1e-38 167.2 1323 23.1
Cpa.g.sc94.4 Carica papaya HOM05D001674 ORTHO05D008599 4.5e-37 161.8 197 51.8
CBR_g23198 Chara braunii HOM05D000019 ORTHO05D000048 1.7e-31 143.3 314 32.2
Actinidia09203 Actinidia chinensis HOM05D001674 ORTHO05D008599 9.1e-30 137.5 131 63.4
MCO15G104 Micromonas commoda HOM05D001674 ORTHO05D008599 3.9e-25 122.1 253 33.6
TAR376G0971 Trochodendron aralioides HOM05D001674 ORTHO05D008599 7.4e-24 117.9 111 54.1
Actinidia09211 Actinidia chinensis HOM05D001674 ORTHO05D008599 2.2e-23 116.3 262 37.8
Cre16.g679400 Chlamydomonas reinhardtii HOM05D001674 ORTHO05D008599 3.1e-22 112.5 279 28.7
CBR_g23193 Chara braunii HOM05D000019 ORTHO05D000048 7.0e-22 111.3 106 56.6
Actinidia09202 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.6e-18 100.1 98 59.2
CBR_g23210 Chara braunii HOM05D000019 ORTHO05D000002 4.8e-15 88.6 72 50.0
CBR_g23187 Chara braunii HOM05D001674 ORTHO05D000353 4.5e-13 82.0 69 59.4
Psat3g111480 Pisum sativum HOM05D001026 ORTHO05D008599 5.9e-13 81.6 59 66.1
unitig_37.g12720 Utricularia gibba HOM05D001674 ORTHO05D008599 1.3e-12 80.5 188 33.0
Migut.C00071 Erythranthe guttata HOM05D001674 ORTHO05D008599 4.1e-06 58.9 71 54.9


User provided reference genes

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