Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G472.34 Capsicum annuum HOM05D013442 ORTHO05D016868 7.8e-236 820.1 413 100.0
CAN.G282.36 Capsicum annuum HOM05D013442 ORTHO05D016868 1.3e-190 669.8 595 63.0
CAN.G1697.3 Capsicum annuum HOM05D013442 ORTHO05D016868 4.1e-168 595.1 639 55.4
CAN.G500.28 Capsicum annuum HOM05D013442 ORTHO05D016868 6.8e-115 418.3 571 47.6
CAN.G1021.6 Capsicum annuum HOM05D013442 ORTHO05D016868 1.6e-111 407.1 462 52.6
CAN.G785.11 Capsicum annuum HOM05D013442 ORTHO05D016868 4.6e-111 405.6 434 57.6
CAN.G840.7 Capsicum annuum HOM05D013442 ORTHO05D016868 5.8e-98 362.1 553 43.9
CAN.G4745.1 Capsicum annuum HOM05D013442 ORTHO05D016868 2.3e-46 190.7 261 44.8
CAN.G1537.8 Capsicum annuum HOM05D013442 ORTHO05D016868 1.3e-17 95.1 57 75.4
PGSC0003DMG400015852 Solanum tuberosum HOM05D001726 ORTHO05D018885 1.0e-14 85.5 105 48.6
Peaxi162Scf01807g00015 Petunia axillaris HOM05D001932 ORTHO05D306439 3.0e-14 84.0 107 51.4
Nitab4.5_0001378g0100 Nicotiana tabacum HOM05D013442 ORTHO05D016868 5.9e-10 69.7 106 42.5
Peaxi162Scf00540g00061 Petunia axillaris HOM05D001932 ORTHO05D002319 3.8e-09 67.0 84 48.8
Solyc06g076870.4 Solanum lycopersicum HOM05D001932 ORTHO05D002319 8.6e-09 65.9 111 40.5
Sopen06g033260 Solanum pennellii HOM05D001932 ORTHO05D002319 1.5e-08 65.1 111 40.5
Psat0s4462g0240 Pisum sativum HOM05D001932 ORTHO05D004089 4.3e-08 63.5 96 39.6
CAN.G394.118 Capsicum annuum HOM05D001932 ORTHO05D002319 5.6e-08 63.2 109 39.4
Nitab4.5_0000010g0250 Nicotiana tabacum HOM05D001932 ORTHO05D002319 5.6e-08 63.2 80 46.2
Nitab4.5_0005502g0040 Nicotiana tabacum HOM05D001932 ORTHO05D002319 5.6e-08 63.2 78 47.4
Psat7g159120 Pisum sativum HOM05D000127 ORTHO05D000243 5.6e-08 63.2 140 32.9
Actinidia23892 Actinidia chinensis HOM05D001932 ORTHO05D002319 7.3e-08 62.8 117 35.9
PGSC0003DMG400030442 Solanum tuberosum HOM05D001932 ORTHO05D002319 1.2e-07 62.0 111 38.7
GSVIVG01032857001 Vitis vinifera HOM05D001932 ORTHO05D002319 1.2e-07 62.0 92 42.4
PSO832G2984 Papaver somniferum HOM05D001932 ORTHO05D002319 2.1e-07 61.2 102 40.2
Peaxi162Scf00592g00428 Petunia axillaris HOM05D000001 ORTHO05D000003 3.6e-07 60.5 74 48.6
Psat2g033920 Pisum sativum HOM05D001932 ORTHO05D002319 3.6e-07 60.5 97 40.2
SGA_v2.0_scaffold78G25468 Striga asiatica HOM05D001932 ORTHO05D002319 3.6e-07 60.5 91 38.5
Thhalv10016954m.g Eutrema salsugineum HOM05D001932 ORTHO05D002319 4.7e-07 60.1 89 40.4
Hma1.2p1_1409F.1_g281570 Hydrangea macrophylla HOM05D001932 ORTHO05D002319 4.7e-07 60.1 91 41.8
Medtr3g108280 Medicago truncatula HOM05D001932 ORTHO05D002319 4.7e-07 60.1 88 40.9
PGR142G2934 Punica granatum HOM05D001932 ORTHO05D002319 6.1e-07 59.7 90 38.9
CARHR207500 Cardamine hirsuta HOM05D001932 ORTHO05D002319 8.0e-07 59.3 125 35.2
Glyma.02G255500 Glycine max HOM05D001932 ORTHO05D002319 8.0e-07 59.3 87 39.1
AT2G40010 Arabidopsis thaliana HOM05D001932 ORTHO05D002319 1.0e-06 58.9 89 38.2
CAN.G79.36 Capsicum annuum HOM05D001932 ORTHO05D002319 1.0e-06 58.9 89 39.3
FvH4_5g34410 Fragaria vesca HOM05D001932 ORTHO05D002319 1.0e-06 58.9 88 38.6
FAN18G1624 Fragaria x ananassa HOM05D001932 ORTHO05D002319 1.0e-06 58.9 88 38.6
Glyma.14G061100 Glycine max HOM05D001932 ORTHO05D002319 1.0e-06 58.9 87 39.1
unitig_60.g25679 Utricularia gibba HOM05D001932 ORTHO05D002319 1.4e-06 58.5 101 38.6
arahy.Tifrunner.gnm1.ann1.AS107A Arachis hypogaea HOM05D001932 ORTHO05D002319 1.8e-06 58.2 87 40.2
CDE08G0393 Ceratophyllum demersum HOM05D001932 ORTHO05D002319 1.8e-06 58.2 99 39.4
FvH4_7g24570 Fragaria vesca HOM05D001932 ORTHO05D002319 1.8e-06 58.2 88 37.5
FAN01G0309 Fragaria x ananassa HOM05D001932 ORTHO05D006975 1.8e-06 58.2 88 37.5
FAN03G2368 Fragaria x ananassa HOM05D001932 ORTHO05D002319 1.8e-06 58.2 88 37.5
FAN03G2493 Fragaria x ananassa HOM05D001932 ORTHO05D002319 1.8e-06 58.2 88 37.5
FAN06G4774 Fragaria x ananassa HOM05D001932 ORTHO05D002319 1.8e-06 58.2 88 37.5
FAN10G2360 Fragaria x ananassa HOM05D001932 ORTHO05D002319 1.8e-06 58.2 88 37.5
Lalb_Chr18g0052661 Lupinus albus HOM05D001932 ORTHO05D002319 1.8e-06 58.2 102 36.3
PSO339G1475 Papaver somniferum HOM05D001932 ORTHO05D002319 1.8e-06 58.2 92 39.1
PSO384G5058 Papaver somniferum HOM05D001932 ORTHO05D002319 1.8e-06 58.2 92 39.1
VMungo1215G3444 Vigna mungo HOM05D001932 ORTHO05D002319 1.8e-06 58.2 87 39.1
Zm00001eb173180 Zea mays HOM05D001932 ORTHO05D002319 1.8e-06 58.2 86 43.0
BolC3t15046H Brassica oleracea HOM05D001932 ORTHO05D002319 2.3e-06 57.8 92 37.0
BraA03t11471Z Brassica rapa HOM05D001932 ORTHO05D002319 2.3e-06 57.8 92 38.0
Dinv28628 Davidia involucrata HOM05D001932 ORTHO05D002319 2.3e-06 57.8 91 40.7
FvH4_7g24170 Fragaria vesca HOM05D001932 ORTHO05D002319 2.3e-06 57.8 88 37.5
Gohir.A05G316000 Gossypium hirsutum HOM05D001932 ORTHO05D002319 2.3e-06 57.8 91 40.7
Rhsim09G0173200 Rhododendron simsii HOM05D001932 ORTHO05D002319 2.3e-06 57.8 101 36.6
Thecc.10G023100 Theobroma cacao HOM05D001932 ORTHO05D002319 2.3e-06 57.8 91 41.8
TAR369G0303 Trochodendron aralioides HOM05D001932 ORTHO05D002319 2.3e-06 57.8 86 41.9
Cpa.g.sc19.207 Carica papaya HOM05D001932 ORTHO05D002319 3.0e-06 57.4 89 40.4
Pp3c11_3700 Physcomitrium patens HOM05D001932 ORTHO05D002319 3.0e-06 57.4 91 42.9
Psat5g026480 Pisum sativum HOM05D001932 ORTHO05D002319 3.0e-06 57.4 87 39.1
RcHm_v2.0_Chr1g0369751 Rosa chinensis HOM05D001932 ORTHO05D002319 3.0e-06 57.4 88 37.5
GSVIVG01016313001 Vitis vinifera HOM05D001932 ORTHO05D002319 3.0e-06 57.4 91 39.6
Zm00001eb261840 Zea mays HOM05D001932 ORTHO05D002319 3.0e-06 57.4 86 41.9
arahy.Tifrunner.gnm1.ann1.UK1KTC Arachis hypogaea HOM05D001932 ORTHO05D002319 4.0e-06 57.0 87 40.2
BcaC01g05447 Brassica carinata HOM05D001932 ORTHO05D002319 4.0e-06 57.0 92 37.0
CANSAT54G0645 Cannabis sativa HOM05D001932 ORTHO05D002319 4.0e-06 57.0 125 33.6
DCAR_032141 Daucus carota HOM05D001932 ORTHO05D002319 4.0e-06 57.0 81 43.2
Dinv34411 Davidia involucrata HOM05D001932 ORTHO05D002319 4.0e-06 57.0 91 39.6
FAN06G2993 Fragaria x ananassa HOM05D001932 ORTHO05D006975 4.0e-06 57.0 88 36.4
Glyma.11G228200 Glycine max HOM05D001932 ORTHO05D002319 4.0e-06 57.0 92 39.1
Manes.07G127000 Manihot esculenta HOM05D001932 ORTHO05D002319 4.0e-06 57.0 91 40.7
SEGI_01689 Sequoiadendron giganteum HOM05D001932 ORTHO05D002319 4.0e-06 57.0 97 37.1
AagrBONN_evm.TU.Sc2ySwM_368.2135 Anthoceros agrestis HOM05D001932 ORTHO05D002319 5.2e-06 56.6 99 37.4
arahy.Tifrunner.gnm1.ann1.VEJ0KU Arachis hypogaea HOM05D001932 ORTHO05D002319 5.2e-06 56.6 87 40.2
CDE02G3072 Ceratophyllum demersum HOM05D001932 ORTHO05D002319 5.2e-06 56.6 81 43.2
Duzib128G1539 Durio zibethinus HOM05D001932 ORTHO05D002319 5.2e-06 56.6 91 39.6
Migut.H01132 Erythranthe guttata HOM05D001932 ORTHO05D002319 5.2e-06 56.6 91 38.5
Medtr5g082180 Medicago truncatula HOM05D001932 ORTHO05D002319 5.2e-06 56.6 87 37.9
Nitab4.5_0001346g0030 Nicotiana tabacum HOM05D001932 ORTHO05D002319 5.2e-06 56.6 89 38.2
Oeu028595.1 Olea europaea HOM05D001932 ORTHO05D002319 5.2e-06 56.6 91 39.6
Sc12g0000800 Simmondsia chinensis HOM05D001932 ORTHO05D002319 5.2e-06 56.6 79 40.5
TAR369G0912 Trochodendron aralioides HOM05D001932 ORTHO05D002319 5.2e-06 56.6 86 40.7
HPP92_018196 Vanilla planifolia HOM05D001932 ORTHO05D002319 5.2e-06 56.6 86 43.0
CANSAT56G0886 Cannabis sativa HOM05D001932 ORTHO05D002319 6.8e-06 56.2 89 39.3
COL.COLO4_25633 Corchorus olitorius HOM05D001932 ORTHO05D002319 6.8e-06 56.2 99 37.4
Manes.10G016100 Manihot esculenta HOM05D001932 ORTHO05D002319 6.8e-06 56.2 89 39.3
Nn2g11426 Nelumbo nucifera HOM05D001932 ORTHO05D002319 6.8e-06 56.2 101 36.6
Hund13838 Selenicereus undatus HOM05D001932 ORTHO05D002319 6.8e-06 56.2 89 40.4
Solyc09g091520.2 Solanum lycopersicum HOM05D001932 ORTHO05D002319 6.8e-06 56.2 121 31.4
unitig_0.g235 Utricularia gibba HOM05D001932 ORTHO05D002319 6.8e-06 56.2 92 39.1
BcaB04g18546 Brassica carinata HOM05D001932 ORTHO05D002319 8.9e-06 55.8 87 40.2
A03p22440 Brassica napus HOM05D001932 ORTHO05D002319 8.9e-06 55.8 117 33.3
CSS0018186 Camellia sinensis var. sinensis HOM05D001932 ORTHO05D002319 8.9e-06 55.8 102 35.3
Duzib114G0066 Durio zibethinus HOM05D001932 ORTHO05D002319 8.9e-06 55.8 91 38.5
Duzib168G1514 Durio zibethinus HOM05D001932 ORTHO05D002319 8.9e-06 55.8 95 37.9
Lalb_Chr04g0250681 Lupinus albus HOM05D001932 ORTHO05D002319 8.9e-06 55.8 87 36.8
Lalb_Chr10g0105081 Lupinus albus HOM05D001932 ORTHO05D002319 8.9e-06 55.8 84 38.1
Phvul.003G020600 Phaseolus vulgaris HOM05D001932 ORTHO05D002319 8.9e-06 55.8 87 39.1
Rhsim01G0236000 Rhododendron simsii HOM05D001932 ORTHO05D002319 8.9e-06 55.8 102 35.3
Rhsim03G0141500 Rhododendron simsii HOM05D001932 ORTHO05D002319 8.9e-06 55.8 99 37.4
TAR633G2488 Trochodendron aralioides HOM05D001932 ORTHO05D002319 8.9e-06 55.8 89 38.2


User provided reference genes

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