Gene: Pp3c11_3700

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c11_3700
  • Transcript Identifier Pp3c11_3700V3.2
  • Gene Type Coding gene
  • Location Chr11 : 2246578-2248340 : positive

Gene Family Information

  • ID HOM05D001932
  • #Genes/#Species 342/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c11_3700V3.2
  • pacid 32959431
  • alias Pp1s39_424V6
  • alias Phypa_180102
  • alias Phpat.011G014500
  • uniprot A9S0Q1

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034059
ISO
PLAZA Integrative Orthologyresponse to anoxia Zm00001eb261840
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT3G09200
GO:0042254
IEA
GOA Databaseribosome biogenesis
GO:0042254
IEA
InterProribosome biogenesis
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT3G09200
GO:0010043
ISO
PLAZA Integrative Orthologyresponse to zinc ion AT3G09200
GO:0002181
IBA
GOA Databasecytoplasmic translation
GO:0000027
IBA
GOA Databaseribosomal large subunit assembly

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G09200
GO:0005507
ISO
PLAZA Integrative Orthologycopper ion binding AT3G09200
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G40010
GO:0044877
ISO
PLAZA Integrative Orthologyprotein-containing complex binding Zm00001eb261840
GO:0003735
IBA
GOA Databasestructural constituent of ribosome
GO:0070180
IBA
GOA Databaselarge ribosomal subunit rRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT3G09200
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G09200
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT3G09200
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G09200
GO:0042788
ISO
PLAZA Integrative Orthologypolysomal ribosome AT3G09200
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT3G09200
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT3G09200
GO:0022625
IBA
GOA Databasecytosolic large ribosomal subunit
GO:0005840
IEA
GOA Databaseribosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR030670 60S acidic ribosomal protein P0
IPR043164 50S ribosomal protein L10, insertion domain superfamily
IPR040637 60S ribosomal protein L10P, insertion domain
IPR043141 Ribosomal protein L10-like domain superfamily
IPR001790 Ribosomal protein L10P
Mapman id Description
17.1.2.1.45 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPP0