Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G46.2 Capsicum annuum HOM05D001601 ORTHO05D002628 7.1e-187 657.1 335 100.0
CAN.G1731.6 Capsicum annuum HOM05D001601 ORTHO05D002628 4.6e-77 292.4 179 85.5
CAN.G682.3 Capsicum annuum HOM05D001601 ORTHO05D002628 5.6e-75 285.4 179 83.8
Sopen05g001310 Solanum pennellii HOM05D001601 ORTHO05D002628 2.2e-71 273.5 251 64.1
Solyc05g005300.2 Solanum lycopersicum HOM05D001601 ORTHO05D002628 4.9e-71 272.3 251 63.7
Nitab4.5_0001483g0050 Nicotiana tabacum HOM05D001601 ORTHO05D002628 9.5e-67 258.1 180 74.4
Nitab4.5_0000203g0220 Nicotiana tabacum HOM05D001601 ORTHO05D002628 3.1e-65 253.1 180 72.8
Peaxi162Scf00710g00416 Petunia axillaris HOM05D001601 ORTHO05D002628 5.4e-62 242.3 253 56.5
CSS0039169 Camellia sinensis var. sinensis HOM05D001601 ORTHO05D002628 3.9e-20 103.2 207 35.7
vmacro16245 Vaccinium macrocarpon HOM05D001601 ORTHO05D002628 8.5e-15 85.5 201 32.8
Rhsim12G0118200 Rhododendron simsii HOM05D000812 ORTHO05D000672 1.4e-14 84.7 201 32.3
Lj3A1054T81 Lonicera japonica HOM05D001601 ORTHO05D002628 1.9e-14 84.3 201 33.8
Duzib268G1820 Durio zibethinus HOM05D001601 ORTHO05D002628 7.2e-14 82.4 182 34.6
TWI75G0278 Tripterygium wilfordii HOM05D001601 ORTHO05D002628 1.2e-13 81.6 142 38.0
Thecc.02G251300 Theobroma cacao HOM05D001601 ORTHO05D002628 1.8e-12 77.8 182 34.1
Haze_12188 Corylus avellana HOM05D001601 ORTHO05D002628 2.3e-12 77.4 180 32.8
DCAR_007086 Daucus carota HOM05D001601 ORTHO05D002628 3.0e-12 77.0 162 37.0
MSTRG.18499 Avicennia marina HOM05D001601 ORTHO05D002628 3.3e-11 73.6 177 33.9
Cfa009154 Carpinus fangiana HOM05D001601 ORTHO05D002628 3.3e-11 73.6 229 29.3
Sc11g0001150 Simmondsia chinensis HOM05D001601 ORTHO05D002628 5.7e-11 72.8 164 33.5
Psat4g124280 Pisum sativum HOM05D001601 ORTHO05D002628 7.4e-11 72.4 208 31.7
QL03p060111 Quercus lobata HOM05D001601 ORTHO05D002628 1.7e-10 71.2 176 34.1
TPR.G11734 Trifolium pratense HOM05D001601 ORTHO05D002628 1.7e-10 71.2 164 34.1
Dinv24842 Davidia involucrata HOM05D000812 ORTHO05D002628 2.2e-10 70.9 171 33.3
Gohir.A05G314400 Gossypium hirsutum HOM05D001601 ORTHO05D002628 3.7e-10 70.1 174 31.6
Manes.12G028000 Manihot esculenta HOM05D001601 ORTHO05D002628 3.7e-10 70.1 187 32.1
Sed0004702 Sechium edule HOM05D001601 ORTHO05D002628 4.8e-10 69.7 172 34.3
Gohir.D05G313000 Gossypium hirsutum HOM05D001601 ORTHO05D002628 8.2e-10 68.9 192 31.8
Gorai.009G337700 Gossypium raimondii HOM05D001601 ORTHO05D002628 8.2e-10 68.9 192 31.8
Oeu057821.1 Olea europaea HOM05D001601 ORTHO05D002628 8.2e-10 68.9 181 33.1
Cpa.g.sc69.52 Carica papaya HOM05D001601 ORTHO05D002628 1.1e-09 68.6 144 36.1
CiPaw.06G071400 Carya illinoinensis HOM05D001601 ORTHO05D002628 1.4e-09 68.2 165 35.2
Phvul.003G060700 Phaseolus vulgaris HOM05D001601 ORTHO05D002628 1.2e-08 65.1 160 31.2
COL.COLO4_24178 Corchorus olitorius HOM05D001601 ORTHO05D002628 2.0e-08 64.3 204 31.9
Ciclev10033428m.g Citrus clementina HOM05D001601 ORTHO05D002628 2.6e-08 63.9 177 31.1
SGA_v2.0_scaffold29G12096 Striga asiatica HOM05D001601 ORTHO05D002628 4.5e-08 63.2 155 34.2
unitig_64.g29773 Utricularia gibba HOM05D001601 ORTHO05D002628 4.5e-08 63.2 76 44.7
VMungo0251G2485 Vigna mungo HOM05D001601 ORTHO05D002628 4.5e-08 63.2 160 33.1
MD16G1093900 Malus domestica HOM05D001601 ORTHO05D002628 5.9e-08 62.8 168 33.3
ClCG05G025360 Citrullus lanatus HOM05D001601 ORTHO05D002628 7.7e-08 62.4 166 32.5
Lalb_Chr09g0334991 Lupinus albus HOM05D001601 ORTHO05D002628 7.7e-08 62.4 204 29.4
MELO3C011994.2 Cucumis melo HOM05D001601 ORTHO05D002628 1.7e-07 61.2 164 31.7
DCAR_026538 Daucus carota HOM05D001601 ORTHO05D002628 1.7e-07 61.2 200 29.0
Gohir.A12G143000 Gossypium hirsutum HOM05D001601 ORTHO05D002628 1.7e-07 61.2 191 31.4
HanXRQChr17g0539631 Helianthus annuus HOM05D001601 ORTHO05D002628 2.9e-07 60.5 160 31.2
Potri.008G189600 Populus trichocarpa HOM05D001601 ORTHO05D002628 2.9e-07 60.5 146 34.9
AUR62014049 Chenopodium quinoa HOM05D001601 ORTHO05D002628 5.0e-07 59.7 179 30.2
Glyma.08G286500 Glycine max HOM05D001601 ORTHO05D002628 5.0e-07 59.7 150 34.0
EL10Ac6g13680 Beta vulgaris HOM05D001601 ORTHO05D002628 8.5e-07 58.9 157 31.8
Gohir.D12G147800 Gossypium hirsutum HOM05D001601 ORTHO05D002628 8.5e-07 58.9 243 28.8
Gorai.008G159000 Gossypium raimondii HOM05D001601 ORTHO05D002628 8.5e-07 58.9 194 30.9
Prupe.1G252600 Prunus persica HOM05D001601 ORTHO05D002628 8.5e-07 58.9 145 33.1
Lj4g0008008 Lotus japonicus HOM05D001601 ORTHO05D002628 1.1e-06 58.5 206 28.6
Ah.03g132740 Amaranthus hybridus HOM05D001601 ORTHO05D002628 1.4e-06 58.2 175 31.4
arahy.Tifrunner.gnm1.ann1.BX85EM Arachis hypogaea HOM05D001601 ORTHO05D002628 1.4e-06 58.2 251 25.5
CsaV3_5G031540 Cucumis sativus L. HOM05D001601 ORTHO05D002628 1.9e-06 57.8 170 30.6
AagrBONN_evm.TU.Sc2ySwM_368.254 Anthoceros agrestis HOM05D000884 ORTHO05D002958 2.5e-06 57.4 64 46.9
arahy.Tifrunner.gnm1.ann1.JV7126 Arachis hypogaea HOM05D001601 ORTHO05D002628 2.5e-06 57.4 250 26.0
Sabra08G0144000 Salix brachista HOM05D001601 ORTHO05D002628 2.5e-06 57.4 134 37.3
Glyma.18G138751 Glycine max HOM05D001601 ORTHO05D002628 5.5e-06 56.2 61 50.8
Migut.D00743 Erythranthe guttata HOM05D001601 ORTHO05D002628 7.2e-06 55.8 110 38.2
Mapoly0028s0100 Marchantia polymorpha HOM05D000884 ORTHO05D002958 7.2e-06 55.8 83 41.0
FAN17G0319 Fragaria x ananassa HOM05D001601 ORTHO05D002628 9.4e-06 55.5 144 31.9
Potri.010G041500 Populus trichocarpa HOM05D001601 ORTHO05D002628 9.4e-06 55.5 54 57.4


User provided reference genes

Program Settings