Gene: Sopen05g001310
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen05g001310
- Transcript Identifier Sopen05g001310.1
- Gene Type Coding gene
- Location Spenn-ch05 : 263378-265479 : negative
Gene Family Information
- ID HOM05D001601
- #Genes/#Species 402/94
- Phylogenetic origin
- ID ORTHO05D002628
- #Genes/#Species 274/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen05g001310.1
Descriptions
- Description Encodes a basic helix-loop helix transcription factor involved in tapetal cell development. Loss of function mutations are male sterile. AMS binds to a region termed the E box of target gene promoters. | ABORTED MICROSPORES (AMS) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: tapetal layer development, regulation of transcription, pollen development | LOCATED IN: nucleus | EXPRESSED IN: petal, leaf whorl, sepal, flower, seed | EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage | CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain , Helix-loop-helix DNA-binding | BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-templated | AT1G10610 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046983 | IEA | InterPro | protein dimerization activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G10610 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.30 | RNA biosynthesis.transcriptional regulation.transcription factor (bHLH) |