Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G438.36 Capsicum annuum HOM05D002908 ORTHO05D007390 7.7e-64 246.9 117 100.0
Peaxi162Scf00015g00145 Petunia axillaris HOM05D002908 ORTHO05D007390 1.1e-49 199.9 115 83.5
Nitab4.5_0009963g0020 Nicotiana tabacum HOM05D002908 ORTHO05D007390 4.5e-48 194.5 115 82.6
Nitab4.5_0000351g0020 Nicotiana tabacum HOM05D002908 ORTHO05D007390 1.7e-47 192.6 115 80.9
CAN.G1152.12 Capsicum annuum HOM05D002908 ORTHO05D007390 2.9e-47 191.8 115 80.0
Solyc06g066570.4 Solanum lycopersicum HOM05D002908 ORTHO05D007390 5.5e-46 187.6 115 79.1
Sopen06g024840 Solanum pennellii HOM05D002908 ORTHO05D007390 5.5e-46 187.6 115 79.1
PGSC0003DMG400016501 Solanum tuberosum HOM05D002908 ORTHO05D007390 1.6e-45 186.0 115 78.3
Lalb_Chr01g0013051 Lupinus albus HOM05D002908 ORTHO05D007390 1.0e-44 183.3 114 77.2
Cfa002106 Carpinus fangiana HOM05D002908 ORTHO05D007390 6.8e-44 180.6 114 76.3
arahy.Tifrunner.gnm1.ann1.0NGS5F Arachis hypogaea HOM05D002908 ORTHO05D007390 8.8e-44 180.3 114 75.4
arahy.Tifrunner.gnm1.ann1.E6TYPI Arachis hypogaea HOM05D002908 ORTHO05D007390 8.8e-44 180.3 114 75.4
Dinv30470 Davidia involucrata HOM05D002908 ORTHO05D007390 1.5e-43 179.5 114 75.4
DCAR_026336 Daucus carota HOM05D002908 ORTHO05D007390 2.0e-43 179.1 114 75.4
Glyma.07G018400 Glycine max HOM05D002908 ORTHO05D007390 2.6e-43 178.7 114 75.4
Phvul.010G147500 Phaseolus vulgaris HOM05D002908 ORTHO05D007390 2.6e-43 178.7 114 76.3
Eucgr.J02953 Eucalyptus grandis HOM05D002908 ORTHO05D007390 3.4e-43 178.3 114 73.7
Actinidia32717 Actinidia chinensis HOM05D002908 ORTHO05D007390 5.7e-43 177.6 114 75.4
VMungo0331G0294 Vigna mungo HOM05D002908 ORTHO05D007390 5.7e-43 177.6 114 75.4
CSS0023180 Camellia sinensis var. sinensis HOM05D002908 ORTHO05D007390 7.5e-43 177.2 114 73.7
Potri.003G051500 Populus trichocarpa HOM05D002908 ORTHO05D007390 7.5e-43 177.2 115 73.9
CiPaw.01G234600 Carya illinoinensis HOM05D002908 ORTHO05D007390 9.8e-43 176.8 114 74.6
TAR624G0208 Trochodendron aralioides HOM05D002908 ORTHO05D007390 9.8e-43 176.8 114 74.6
CANSAT56G3591 Cannabis sativa HOM05D002908 ORTHO05D007390 1.3e-42 176.4 114 74.6
Ca_11526_v3 Cicer arietinum L. HOM05D002908 ORTHO05D007390 1.3e-42 176.4 114 74.6
Medtr8g013660 Medicago truncatula HOM05D002908 ORTHO05D007390 1.3e-42 176.4 114 74.6
Cc06_g20260 Coffea canephora HOM05D002908 ORTHO05D007390 1.7e-42 176.0 114 74.6
MBI04_g14938_MAGBIO Magnolia biondii HOM05D002908 ORTHO05D007390 1.7e-42 176.0 114 72.8
Prupe.3G064400 Prunus persica HOM05D002908 ORTHO05D007390 1.7e-42 176.0 114 72.8
TPR.G14821 Trifolium pratense HOM05D002908 ORTHO05D007390 1.7e-42 176.0 114 74.6
GSVIVG01017049001 Vitis vinifera HOM05D002908 ORTHO05D007390 1.7e-42 176.0 114 73.7
EL10Ac9g22051 Beta vulgaris HOM05D002908 ORTHO05D007390 2.2e-42 175.6 114 71.1
Glyma.08G203400 Glycine max HOM05D002908 ORTHO05D007390 2.8e-42 175.3 114 73.7
Thecc.06G094700 Theobroma cacao HOM05D002908 ORTHO05D007390 2.8e-42 175.3 114 72.8
vmacro18877 Vaccinium macrocarpon HOM05D002908 ORTHO05D007390 2.8e-42 175.3 114 72.8
AUR62011685 Chenopodium quinoa HOM05D002908 ORTHO05D007390 3.7e-42 174.9 115 70.4
Potri.001G186000 Populus trichocarpa HOM05D002908 ORTHO05D007390 3.7e-42 174.9 115 73.0
HanXRQChr12g0360831 Helianthus annuus HOM05D002908 ORTHO05D007390 6.3e-42 174.1 114 73.7
Sed0011260 Sechium edule HOM05D002908 ORTHO05D007390 6.3e-42 174.1 114 72.8
COL.COLO4_30459 Corchorus olitorius HOM05D002908 ORTHO05D007390 8.3e-42 173.7 114 71.9
PGR102G0394 Punica granatum HOM05D002908 ORTHO05D007390 8.3e-42 173.7 114 73.7
Actinidia21691 Actinidia chinensis HOM05D002908 ORTHO05D007390 1.1e-41 173.3 112 75.0
QL05p021375 Quercus lobata HOM05D002908 ORTHO05D007390 1.1e-41 173.3 114 71.9
MD09G1208200 Malus domestica HOM05D002908 ORTHO05D007390 1.8e-41 172.6 114 71.9
RcHm_v2.0_Chr2g0139271 Rosa chinensis HOM05D002908 ORTHO05D007390 2.4e-41 172.2 114 72.8
ClCG07G013190 Citrullus lanatus HOM05D002908 ORTHO05D007390 3.1e-41 171.8 114 71.1
FvH4_6g31910 Fragaria vesca HOM05D002908 ORTHO05D007390 3.1e-41 171.8 114 72.8
FAN02G4032 Fragaria x ananassa HOM05D002908 ORTHO05D007390 3.1e-41 171.8 114 72.8
FAN14G2394 Fragaria x ananassa HOM05D002908 ORTHO05D007390 3.1e-41 171.8 114 72.8
TWI18G0563 Tripterygium wilfordii HOM05D002908 ORTHO05D007390 3.1e-41 171.8 114 71.9
TAR636G3411 Trochodendron aralioides HOM05D002908 ORTHO05D007390 3.1e-41 171.8 114 71.9
Lsat_1_v5_gn_5_131021 Lactuca sativa HOM05D002908 ORTHO05D007390 4.1e-41 171.4 114 71.1
MD17G1189500 Malus domestica HOM05D002908 ORTHO05D007390 5.4e-41 171.0 114 71.1
Manes.04G131100 Manihot esculenta HOM05D002908 ORTHO05D007390 5.4e-41 171.0 115 70.4
Nn2g11662 Nelumbo nucifera HOM05D002908 ORTHO05D007390 5.4e-41 171.0 114 72.8
Psat4g199400 Pisum sativum HOM05D002908 ORTHO05D007390 5.4e-41 171.0 114 71.9
Ciclev10026026m.g Citrus clementina HOM05D002908 ORTHO05D007390 9.1e-41 170.2 114 71.9
ECA234G0421 Erigeron canadensis HOM05D002908 ORTHO05D007390 9.1e-41 170.2 114 71.1
Oeu000462.1 Olea europaea HOM05D002908 ORTHO05D007390 9.1e-41 170.2 115 71.3
CDE05G0315 Ceratophyllum demersum HOM05D002908 ORTHO05D007390 1.6e-40 169.5 114 71.1
Gohir.A06G188700 Gossypium hirsutum HOM05D002908 ORTHO05D007390 1.6e-40 169.5 114 71.1
Gohir.D06G197300 Gossypium hirsutum HOM05D002908 ORTHO05D007390 1.6e-40 169.5 114 71.1
Gorai.010G229600 Gossypium raimondii HOM05D002908 ORTHO05D007390 1.6e-40 169.5 114 71.1
Duzib235G0543 Durio zibethinus HOM05D002908 ORTHO05D007390 2.0e-40 169.1 114 70.2
FAN09G2740 Fragaria x ananassa HOM05D002908 ORTHO05D007390 2.0e-40 169.1 114 72.8
Duzib192G0943 Durio zibethinus HOM05D002908 ORTHO05D007390 2.7e-40 168.7 114 71.1
Rhsim08G0224800 Rhododendron simsii HOM05D002908 ORTHO05D007390 3.5e-40 168.3 112 73.2
MSTRG.4742 Avicennia marina HOM05D002908 ORTHO05D007390 5.9e-40 167.5 114 70.2
Sc15g0002180 Simmondsia chinensis HOM05D002908 ORTHO05D007390 7.7e-40 167.2 114 69.3
SGA_v2.0_scaffold68G22970 Striga asiatica HOM05D002908 ORTHO05D007390 7.7e-40 167.2 114 71.1
CsaV3_3G023830 Cucumis sativus L. HOM05D002908 ORTHO05D007390 1.0e-39 166.8 114 69.3
MELO3C012977.2 Cucumis melo HOM05D002908 ORTHO05D007390 1.3e-39 166.4 114 69.3
Atru.chr1.3416 Acer truncatum HOM05D002908 ORTHO05D007390 1.7e-39 166.0 114 71.9
Migut.D01011 Erythranthe guttata HOM05D002908 ORTHO05D007390 1.7e-39 166.0 114 70.2
Gorai.011G073300 Gossypium raimondii HOM05D002908 ORTHO05D007390 2.3e-39 165.6 114 68.4
Aqoxy7G01537 Aquilegia oxysepala HOM05D002908 ORTHO05D007390 3.8e-39 164.9 114 68.4
Manes.11G036900 Manihot esculenta HOM05D002908 ORTHO05D007390 3.8e-39 164.9 115 67.8
SGA_v2.0_scaffold4G02012 Striga asiatica HOM05D002908 ORTHO05D007390 5.0e-39 164.5 114 71.1
ATR0315G165 Amborella trichopoda HOM05D002908 ORTHO05D007390 1.1e-38 163.3 114 70.2
CiPaw.02G148100 Carya illinoinensis HOM05D002908 ORTHO05D007390 1.5e-38 162.9 114 70.2
PSO566G0119 Papaver somniferum HOM05D002908 ORTHO05D007390 1.5e-38 162.9 114 70.2
PSO782G2745 Papaver somniferum HOM05D002908 ORTHO05D007390 1.9e-38 162.5 114 70.2
HanXRQChr04g0096211 Helianthus annuus HOM05D002908 ORTHO05D007390 5.5e-38 161.0 114 66.7
Zm00001eb031430 Zea mays HOM05D002908 ORTHO05D007390 5.5e-38 161.0 114 66.7
Thhalv10018845m.g Eutrema salsugineum HOM05D002908 ORTHO05D007390 7.2e-38 160.6 114 66.7
CARHR074760 Cardamine hirsuta HOM05D002908 ORTHO05D007390 1.2e-37 159.8 114 66.7
THA.LOC104813553 Tarenaya hassleriana HOM05D002908 ORTHO05D007390 1.6e-37 159.5 114 67.5
AT1G79810 Arabidopsis thaliana HOM05D002908 ORTHO05D007390 2.1e-37 159.1 114 65.8
Sabra03G0027500 Salix brachista HOM05D002908 ORTHO05D007390 2.1e-37 159.1 142 59.2
HPP92_002914 Vanilla planifolia HOM05D002908 ORTHO05D007390 2.8e-37 158.7 114 65.8
AL2G41740 Arabidopsis lyrata HOM05D002908 ORTHO05D007390 3.6e-37 158.3 114 65.8
Sp5g35950 Schrenkiella parvula HOM05D002908 ORTHO05D007390 3.6e-37 158.3 114 65.8
Lalb_Chr25g0280041 Lupinus albus HOM05D002908 ORTHO05D007390 4.7e-37 157.9 114 68.4
Carub.0002s2769 Capsella rubella HOM05D002908 ORTHO05D007390 6.1e-37 157.5 114 64.9
PGSC0003DMG400002631 Solanum tuberosum HOM05D002908 ORTHO05D007390 6.1e-37 157.5 95 83.2
Os05g0275700 Oryza sativa ssp. japonica HOM05D002908 ORTHO05D007390 8.0e-37 157.1 114 66.7
unitig_736.g22790 Utricularia gibba HOM05D002908 ORTHO05D007390 1.4e-36 156.4 114 67.5
A07p26340 Brassica napus HOM05D002908 ORTHO05D007390 5.2e-36 154.5 114 63.2
C06p28730 Brassica napus HOM05D002908 ORTHO05D007390 5.2e-36 154.5 114 63.2
BolC6t38042H Brassica oleracea HOM05D002908 ORTHO05D007390 5.2e-36 154.5 114 63.2
BraA07t30278Z Brassica rapa HOM05D002908 ORTHO05D007390 5.2e-36 154.5 114 63.2
Hund00658 Selenicereus undatus HOM05D002908 ORTHO05D007390 6.8e-36 154.1 114 64.9
AUR62016511 Chenopodium quinoa HOM05D002908 ORTHO05D007390 1.2e-35 153.3 114 65.8
Aa31LG4G20 Aethionema arabicum HOM05D002908 ORTHO05D007390 2.6e-35 152.1 114 64.0
Haze_16343 Corylus avellana HOM05D002908 ORTHO05D007390 2.2e-34 149.1 95 77.9
Gohir.D10G068700 Gossypium hirsutum HOM05D002908 ORTHO05D007390 2.8e-34 148.7 114 62.3
Lj3g0013088 Lotus japonicus HOM05D002908 ORTHO05D007390 2.8e-34 148.7 97 75.3
Lj5C318G10 Lonicera japonica HOM05D002908 ORTHO05D007390 3.1e-33 145.2 95 73.7
Sabra01G0154100 Salix brachista HOM05D002908 ORTHO05D007390 3.1e-33 145.2 115 67.0
SEGI_14821 Sequoiadendron giganteum HOM05D002908 ORTHO05D007390 5.9e-32 141.0 116 61.2
Hund06642 Selenicereus undatus HOM05D002908 ORTHO05D007390 1.3e-31 139.8 95 72.6
SalBow7G1474 Salvia bowleyana HOM05D002908 ORTHO05D007390 2.3e-31 139.0 94 72.3
Solyc03g120520.2 Solanum lycopersicum HOM05D002908 ORTHO05D007390 4.4e-27 124.8 81 71.6
Lsat_1_v5_gn_1_35361 Lactuca sativa HOM05D002908 ORTHO05D007390 1.9e-25 119.4 79 75.9
AagrBONN_evm.TU.Sc2ySwM_228.2361 Anthoceros agrestis HOM05D002908 ORTHO05D007390 4.1e-25 118.2 115 52.2
CBR_g960 Chara braunii HOM05D002908 ORTHO05D007390 9.2e-25 117.1 118 50.0
SMO146G0339 Selaginella moellendorffii HOM05D002908 ORTHO05D007390 1.2e-24 116.7 115 51.3
Mapoly0052s0120 Marchantia polymorpha HOM05D002908 ORTHO05D007390 2.3e-23 112.5 116 52.6
Pp3c3_18540 Physcomitrium patens HOM05D002908 ORTHO05D007390 6.6e-23 110.9 116 52.6
Lj5C56G8 Lonicera japonica HOM05D002908 ORTHO05D007390 8.3e-18 94.0 67 68.7
Sopen00g008760 Solanum pennellii HOM05D002908 ORTHO05D007390 5.4e-17 91.3 98 52.0
Lsat_1_v5_gn_1_85060 Lactuca sativa HOM05D002908 ORTHO05D007390 9.2e-17 90.5 71 64.8
Dinv38008 Davidia involucrata HOM05D002908 ORTHO05D007390 5.6e-14 81.3 48 79.2
Sed0019299 Sechium edule HOM05D002908 ORTHO05D007390 1.2e-13 80.1 50 74.0
MCO16G131 Micromonas commoda HOM05D002908 ORTHO05D007390 9.9e-11 70.5 121 37.2
Medtr7g090350 Medicago truncatula HOM05D002908 ORTHO05D007390 8.3e-10 67.4 67 55.2
Lsat_1_v5_gn_3_20480 Lactuca sativa HOM05D001398 ORTHO05D011740 2.4e-09 65.9 78 41.0
PRCOL_00006980 Prasinoderma coloniale HOM05D000198 ORTHO05D003232 3.3e-06 55.5 119 31.1


User provided reference genes

Program Settings