Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G431.2 Capsicum annuum HOM05D003201 ORTHO05D008805 1.5e-152 542.7 266 100.0
Sopen01g022430 Solanum pennellii HOM05D003201 ORTHO05D008805 1.1e-131 473.4 262 86.3
Solyc01g057570.3 Solanum lycopersicum HOM05D003201 ORTHO05D008805 1.4e-129 466.5 262 85.5
Sopen01g019970 Solanum pennellii HOM05D003201 ORTHO05D008805 4.1e-121 438.3 262 82.1
Peaxi162Scf01181g00210 Petunia axillaris HOM05D003201 ORTHO05D008805 6.1e-117 424.5 268 79.1
Dinv15525 Davidia involucrata HOM05D003201 ORTHO05D008805 4.7e-93 345.1 267 64.4
CSS0031904 Camellia sinensis var. sinensis HOM05D003201 ORTHO05D008805 1.4e-92 343.6 268 66.0
Nitab4.5_0000075g0050 Nicotiana tabacum HOM05D003201 ORTHO05D008805 2.2e-90 336.3 278 65.1
GSVIVG01034815001 Vitis vinifera HOM05D003201 ORTHO05D008805 2.2e-90 336.3 261 65.9
Gohir.A09G117900 Gossypium hirsutum HOM05D003201 ORTHO05D008805 1.2e-88 330.5 264 64.4
Gohir.D09G114700 Gossypium hirsutum HOM05D003201 ORTHO05D008805 4.6e-88 328.6 260 63.8
Cc01_g05060 Coffea canephora HOM05D003201 ORTHO05D008805 6.0e-88 328.2 262 62.2
Hma1.2p1_1133F.1_g260360 Hydrangea macrophylla HOM05D003201 ORTHO05D008805 6.0e-88 328.2 268 62.7
Hma1.2p1_1133F.1_g260370 Hydrangea macrophylla HOM05D003201 ORTHO05D008805 6.0e-88 328.2 268 62.7
Actinidia16221 Actinidia chinensis HOM05D003201 ORTHO05D008805 2.3e-87 326.2 267 61.4
Thecc.05G124600 Theobroma cacao HOM05D003201 ORTHO05D008805 2.3e-87 326.2 263 62.7
Migut.N00525 Erythranthe guttata HOM05D003201 ORTHO05D008805 4.3e-86 322.0 264 62.1
Potri.013G161600 Populus trichocarpa HOM05D003201 ORTHO05D008805 4.3e-86 322.0 266 62.4
ECA248G3933 Erigeron canadensis HOM05D003201 ORTHO05D008805 2.1e-85 319.7 255 62.4
RcHm_v2.0_Chr5g0084171 Rosa chinensis HOM05D003201 ORTHO05D008805 2.1e-85 319.7 267 61.4
TAR623G0449 Trochodendron aralioides HOM05D003201 ORTHO05D008805 2.1e-85 319.7 266 60.9
vmacro04280 Vaccinium macrocarpon HOM05D003201 ORTHO05D008805 2.1e-85 319.7 281 58.0
Prupe.6G000300 Prunus persica HOM05D003201 ORTHO05D008805 3.6e-85 318.9 267 59.2
FvH4_3g46100 Fragaria vesca HOM05D003201 ORTHO05D008805 4.7e-85 318.5 267 61.8
TWI34G1882 Tripterygium wilfordii HOM05D003201 ORTHO05D008805 1.1e-84 317.4 255 62.7
Lalb_Chr01g0008671 Lupinus albus HOM05D003201 ORTHO05D008805 6.8e-84 314.7 268 59.7
MSTRG.12815 Avicennia marina HOM05D003201 ORTHO05D008805 1.5e-83 313.5 261 62.8
Cfa002302 Carpinus fangiana HOM05D003201 ORTHO05D008805 1.5e-83 313.5 258 62.4
HanXRQChr17g0555621 Helianthus annuus HOM05D003201 ORTHO05D008805 1.5e-83 313.5 262 60.3
Glyma.16G207100 Glycine max HOM05D003201 ORTHO05D008805 5.8e-83 311.6 277 58.8
MD11G1000200 Malus domestica HOM05D003201 ORTHO05D008805 5.8e-83 311.6 268 59.3
Medtr6g059320 Medicago truncatula HOM05D003201 ORTHO05D008805 2.2e-82 309.7 270 59.6
Sabra13G0129200 Salix brachista HOM05D003201 ORTHO05D008805 2.2e-82 309.7 267 60.3
QL04p043008 Quercus lobata HOM05D003201 ORTHO05D008805 2.9e-82 309.3 266 59.4
Aqoxy5G03624 Aquilegia oxysepala HOM05D003201 ORTHO05D008805 4.9e-82 308.5 262 59.5
Psat1g112800 Pisum sativum HOM05D003201 ORTHO05D008805 3.2e-81 305.8 264 60.2
MBI13_g39202_MAGBIO Magnolia biondii HOM05D003201 ORTHO05D008805 5.4e-81 305.1 268 59.3
PSO339G6265 Papaver somniferum HOM05D003201 ORTHO05D008805 7.1e-81 304.7 272 57.7
Phvul.004G131600 Phaseolus vulgaris HOM05D003201 ORTHO05D008805 9.2e-81 304.3 270 57.4
TPR.G5800 Trifolium pratense HOM05D003201 ORTHO05D008805 2.1e-80 303.1 275 58.9
PSO384G0221 Papaver somniferum HOM05D003201 ORTHO05D008805 4.6e-80 302.0 269 57.6
AUR62000916 Chenopodium quinoa HOM05D003201 ORTHO05D008805 6.0e-80 301.6 266 58.6
DCAR_028397 Daucus carota HOM05D003201 ORTHO05D008805 6.0e-80 301.6 256 59.0
VMungo0464G1483 Vigna mungo HOM05D003201 ORTHO05D008805 6.0e-80 301.6 272 55.9
Lj2g0011105 Lotus japonicus HOM05D003201 ORTHO05D008805 1.7e-79 300.1 260 58.8
Glyma.09G156400 Glycine max HOM05D003201 ORTHO05D008805 5.1e-79 298.5 277 57.4
BraA01t01146Z Brassica rapa HOM05D003201 ORTHO05D008914 1.9e-78 296.6 256 59.8
CANSAT35G1729 Cannabis sativa HOM05D003201 ORTHO05D008805 1.9e-78 296.6 256 60.2
C01p14340 Brassica napus HOM05D003201 ORTHO05D008914 3.3e-78 295.8 262 58.0
MELO3C024592.2 Cucumis melo HOM05D003201 ORTHO05D008805 3.3e-78 295.8 260 56.9
Sp7g18690 Schrenkiella parvula HOM05D003201 ORTHO05D008805 4.3e-78 295.4 257 59.1
SGA_v2.0_scaffold6G03334 Striga asiatica HOM05D003201 ORTHO05D008805 5.6e-78 295.0 282 56.0
Thhalv10026088m.g Eutrema salsugineum HOM05D003201 ORTHO05D008805 9.5e-78 294.3 256 58.6
A01p12040 Brassica napus HOM05D003201 ORTHO05D008914 1.6e-77 293.5 256 59.4
CARHR227170 Cardamine hirsuta HOM05D003201 ORTHO05D008805 2.1e-77 293.1 262 58.8
THA.LOC104806236 Tarenaya hassleriana HOM05D003201 ORTHO05D008805 2.1e-77 293.1 253 58.1
CDE02G2127 Ceratophyllum demersum HOM05D003201 ORTHO05D008805 1.8e-76 290.0 273 52.7
CsaV3_6G041170 Cucumis sativus L. HOM05D003201 ORTHO05D008805 3.1e-76 289.3 260 56.2
ClCG01G015060 Citrullus lanatus HOM05D003201 ORTHO05D008805 1.5e-75 287.0 260 55.8
Aa31LG6G2740 Aethionema arabicum HOM05D003201 ORTHO05D008914 9.9e-75 284.3 264 54.9
AL7G33540 Arabidopsis lyrata HOM05D003201 ORTHO05D008805 1.7e-74 283.5 256 59.8
BolC1t01393H Brassica oleracea HOM05D000280 ORTHO05D004510 2.9e-74 282.7 258 57.0
Carub.0007s2082 Capsella rubella HOM05D003201 ORTHO05D008805 1.4e-73 280.4 256 57.0
Gorai.006G132500 Gossypium raimondii HOM05D003201 ORTHO05D008805 1.4e-73 280.4 190 71.1
CiPaw.03G255400 Carya illinoinensis HOM05D003201 ORTHO05D008805 1.9e-73 280.0 227 65.2
Sc18g0002730 Simmondsia chinensis HOM05D003201 ORTHO05D008805 2.4e-73 279.6 203 67.0
Atru.chr2.209 Acer truncatum HOM05D003201 ORTHO05D008805 3.2e-73 279.3 184 70.1
arahy.Tifrunner.gnm1.ann1.75P5EB Arachis hypogaea HOM05D003201 ORTHO05D008805 5.4e-73 278.5 220 62.7
unitig_0.g1143 Utricularia gibba HOM05D003201 ORTHO05D008805 7.1e-73 278.1 256 56.6
EL10Ac4g09260 Beta vulgaris HOM05D003201 ORTHO05D008805 1.2e-72 277.3 293 52.2
PGSC0003DMG400026601 Solanum tuberosum HOM05D003201 ORTHO05D008805 1.2e-72 277.3 156 87.8
Ciclev10029320m.g Citrus clementina HOM05D003201 ORTHO05D008805 3.5e-72 275.8 191 69.1
ATR0068G091 Amborella trichopoda HOM05D003201 ORTHO05D008805 4.6e-72 275.4 270 54.1
Lsat_1_v5_gn_1_71340 Lactuca sativa HOM05D003201 ORTHO05D008805 1.0e-71 274.2 218 62.8
Zm00001eb047810 Zea mays HOM05D003201 ORTHO05D008805 3.0e-71 272.7 276 52.9
PGR119G1272 Punica granatum HOM05D003201 ORTHO05D008805 2.5e-70 269.6 270 55.2
BcaC09g51346 Brassica carinata HOM05D003201 ORTHO05D008805 1.6e-69 266.9 219 60.3
HPP92_021155 Vanilla planifolia HOM05D003201 ORTHO05D008805 6.2e-69 265.0 267 52.8
Eucgr.J01718 Eucalyptus grandis HOM05D003201 ORTHO05D008805 1.1e-68 264.2 252 55.2
arahy.Tifrunner.gnm1.ann1.F1EX5J Arachis hypogaea HOM05D003201 ORTHO05D008805 1.8e-68 263.5 236 56.4
SEGI_31075 Sequoiadendron giganteum HOM05D003201 ORTHO05D008805 7.8e-64 248.1 282 48.2
Pp3c2_18510 Physcomitrium patens HOM05D003201 ORTHO05D008805 3.9e-63 245.7 265 49.4
Sed0008662 Sechium edule HOM05D003201 ORTHO05D008805 2.5e-62 243.0 260 50.0
Mapoly0007s0017 Marchantia polymorpha HOM05D003201 ORTHO05D008805 4.8e-61 238.8 265 47.9
Os10g0420000 Oryza sativa ssp. japonica HOM05D003201 ORTHO05D008805 6.9e-60 235.0 263 48.7
Haze_24508 Corylus avellana HOM05D003201 ORTHO05D008805 9.3e-57 224.6 198 61.1
AUR62004843 Chenopodium quinoa HOM05D003201 ORTHO05D008805 8.7e-55 218.0 147 70.1
FAN16G0934 Fragaria x ananassa HOM05D000104 ORTHO05D004363 1.6e-53 213.8 259 50.6
SMO147G0005 Selaginella moellendorffii HOM05D003201 ORTHO05D008805 1.6e-53 213.8 258 45.0
FAN11G2508 Fragaria x ananassa HOM05D003201 ORTHO05D008805 2.1e-53 213.4 198 58.6
AT4G20350 Arabidopsis thaliana HOM05D003201 ORTHO05D008805 8.1e-53 211.5 204 57.4
AUR62005054 Chenopodium quinoa HOM05D003201 ORTHO05D008805 8.1e-53 211.5 203 56.2
Manes.18G121700 Manihot esculenta HOM05D003201 ORTHO05D008805 1.4e-52 210.7 192 59.9
SMO132G0004 Selaginella moellendorffii HOM05D003201 ORTHO05D008805 7.6e-51 204.9 273 42.5
Duzib093G2193 Durio zibethinus HOM05D003201 ORTHO05D008805 9.9e-51 204.5 263 45.6
Cpa.g.sc30.50 Carica papaya HOM05D003201 ORTHO05D008805 2.2e-50 203.4 186 53.8
FAN25G0659 Fragaria x ananassa HOM05D003201 ORTHO05D008805 1.2e-48 197.6 190 57.4
Nitab4.5_0005125g0010 Nicotiana tabacum HOM05D003201 ORTHO05D008805 1.2e-48 197.6 136 75.0
Rhsim13G0235500 Rhododendron simsii HOM05D003201 ORTHO05D008805 1.3e-47 194.1 306 39.5
SalBow3G4219 Salvia bowleyana HOM05D003201 ORTHO05D008805 4.5e-43 179.1 132 68.2
MBI13_g36948_MAGBIO Magnolia biondii HOM05D003201 ORTHO05D008805 2.9e-42 176.4 147 59.9
Ca_25246_v3 Cicer arietinum L. HOM05D003201 ORTHO05D008805 3.8e-34 149.4 160 54.4
FAN21G2623 Fragaria x ananassa HOM05D003201 ORTHO05D008805 1.0e-31 141.4 161 50.9
COL.COLO4_24749 Corchorus olitorius HOM05D003201 ORTHO05D008805 3.0e-31 139.8 263 35.4
Lj1A555G38 Lonicera japonica HOM05D003201 ORTHO05D008805 3.0e-31 139.8 172 48.8
MCO03G055 Micromonas commoda HOM05D003201 ORTHO05D008805 6.7e-31 138.7 246 35.8
CBR_g45550 Chara braunii HOM05D000019 ORTHO05D000353 8.2e-29 131.7 107 53.3
Hund07019 Selenicereus undatus HOM05D003201 ORTHO05D008805 7.7e-27 125.2 161 47.2
FAN11G4037 Fragaria x ananassa HOM05D003201 ORTHO05D008805 2.3e-23 113.6 70 72.9
FAN25G1903 Fragaria x ananassa HOM05D003201 ORTHO05D008805 2.2e-21 107.1 72 69.4
Cre14.g632791 Chlamydomonas reinhardtii HOM05D003201 ORTHO05D008805 3.1e-20 103.2 173 35.3
Cfa026017 Carpinus fangiana HOM05D003201 ORTHO05D124792 1.6e-16 90.9 149 35.6
MCO08G131 Micromonas commoda HOM05D003201 ORTHO05D008805 4.7e-16 89.4 203 31.0
PRCOL_00004726 Prasinoderma coloniale HOM05D003201 ORTHO05D008805 1.4e-15 87.8 192 30.2
BcaC07g37753 Brassica carinata HOM05D007105 ORTHO05D009304 4.7e-08 62.8 254 25.2
BolC8t48138H Brassica oleracea HOM05D007105 ORTHO05D009304 4.7e-08 62.8 254 25.2
Sopen12g032090 Solanum pennellii HOM05D007105 ORTHO05D009304 8.0e-08 62.0 218 25.2
PGSC0003DMG400029377 Solanum tuberosum HOM05D007105 ORTHO05D009304 8.0e-08 62.0 218 25.2
BcaB04g18148 Brassica carinata HOM05D007105 ORTHO05D009304 1.4e-07 61.2 212 24.5
ATR0568G201 Amborella trichopoda HOM05D007105 ORTHO05D009304 1.2e-06 58.2 208 26.9
CAN.G947.23 Capsicum annuum HOM05D007105 ORTHO05D009304 1.5e-06 57.8 202 24.8
A08p10520 Brassica napus HOM05D007105 ORTHO05D006179 3.3e-06 56.6 135 29.6
BraA08t33052Z Brassica rapa HOM05D007105 ORTHO05D009304 3.3e-06 56.6 135 29.6


User provided reference genes

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