Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G409.1 Capsicum annuum HOM05D006389 ORTHO05D007863 1.3e-290 1002.3 485 100.0
Sopen11g021140 Solanum pennellii HOM05D006389 ORTHO05D007863 8.5e-250 866.7 488 87.5
Nitab4.5_0003250g0030 Nicotiana tabacum HOM05D006389 ORTHO05D007863 3.7e-237 824.7 451 87.6
Oeu014062.1 Olea europaea HOM05D006389 ORTHO05D007863 6.4e-181 637.9 466 66.7
Cfa005620 Carpinus fangiana HOM05D006389 ORTHO05D007863 8.7e-178 627.5 474 63.1
Cc01_g04330 Coffea canephora HOM05D006389 ORTHO05D007863 2.5e-177 625.9 490 63.3
Migut.N02297 Erythranthe guttata HOM05D006389 ORTHO05D007863 5.6e-177 624.8 460 63.9
QL01p005900 Quercus lobata HOM05D006389 ORTHO05D007863 3.6e-176 622.1 476 63.4
CiPaw.14G122900 Carya illinoinensis HOM05D006389 ORTHO05D007863 2.0e-174 616.3 476 63.2
DCAR_023759 Daucus carota HOM05D006389 ORTHO05D007863 1.4e-172 610.1 477 60.4
Manes.06G168100 Manihot esculenta HOM05D006389 ORTHO05D007863 1.3e-170 603.6 477 60.2
Prupe.6G021400 Prunus persica HOM05D006389 ORTHO05D007863 1.3e-168 597.0 474 60.3
COL.COLO4_24825 Corchorus olitorius HOM05D006389 ORTHO05D007863 1.9e-164 583.2 475 59.6
Atru.chr3.2543 Acer truncatum HOM05D006389 ORTHO05D007863 1.2e-163 580.5 473 60.3
PSO339G5502 Papaver somniferum HOM05D006389 ORTHO05D007863 2.7e-163 579.3 485 58.4
GSVIVG01025317001 Vitis vinifera HOM05D006389 ORTHO05D007863 6.0e-163 578.2 475 59.6
Potri.001G016800 Populus trichocarpa HOM05D006389 ORTHO05D007863 5.6e-161 571.6 488 57.2
Actinidia16300 Actinidia chinensis HOM05D006389 ORTHO05D007863 7.4e-161 571.2 475 60.2
MD11G1027100 Malus domestica HOM05D006389 ORTHO05D007863 7.4e-161 571.2 474 57.2
RcHm_v2.0_Chr5g0077431 Rosa chinensis HOM05D006389 ORTHO05D007863 1.6e-160 570.1 475 59.4
Gorai.006G129600 Gossypium raimondii HOM05D006389 ORTHO05D007863 5.3e-159 565.1 475 57.9
Gohir.D09G111800 Gossypium hirsutum HOM05D006389 ORTHO05D007863 3.4e-158 562.4 475 57.7
Gohir.A09G115200 Gossypium hirsutum HOM05D006389 ORTHO05D007863 7.6e-158 561.2 470 57.9
TAR623G0704 Trochodendron aralioides HOM05D006389 ORTHO05D007863 1.7e-157 560.1 509 55.8
FvH4_3g43320 Fragaria vesca HOM05D006389 ORTHO05D007863 6.5e-157 558.1 475 58.3
FAN11G1995 Fragaria x ananassa HOM05D006389 ORTHO05D007863 3.2e-156 555.8 475 57.9
TWI34G0575 Tripterygium wilfordii HOM05D006389 ORTHO05D007863 9.3e-156 554.3 478 57.3
CsaV3_1G042620 Cucumis sativus L. HOM05D006389 ORTHO05D007863 2.1e-155 553.1 474 58.6
SalBow4G3167 Salvia bowleyana HOM05D006389 ORTHO05D007863 2.7e-155 552.7 508 54.5
ClCG03G013410 Citrullus lanatus HOM05D006389 ORTHO05D007863 3.9e-154 548.9 475 58.3
Glyma.11G130800 Glycine max HOM05D006389 ORTHO05D007863 1.9e-153 546.6 479 56.6
PGR102G3332 Punica granatum HOM05D006389 ORTHO05D007863 7.4e-153 544.7 473 55.0
arahy.Tifrunner.gnm1.ann1.XMKE9J Arachis hypogaea HOM05D006389 ORTHO05D007863 1.6e-152 543.5 476 57.4
AUR62019259 Chenopodium quinoa HOM05D006389 ORTHO05D007863 4.8e-152 542.0 487 56.1
arahy.Tifrunner.gnm1.ann1.VM78M6 Arachis hypogaea HOM05D006389 ORTHO05D007863 1.2e-150 537.3 474 57.0
Dinv36295 Davidia involucrata HOM05D006389 ORTHO05D007863 4.5e-150 535.4 383 67.6
Nn7g36087 Nelumbo nucifera HOM05D006389 ORTHO05D007863 2.2e-149 533.1 486 56.2
Sed0000566 Sechium edule HOM05D006389 ORTHO05D007863 5.0e-149 531.9 468 55.6
ECA238G3473 Erigeron canadensis HOM05D006389 ORTHO05D007863 2.5e-148 529.6 474 57.4
SGA_v2.0_scaffold3G01545 Striga asiatica HOM05D006389 ORTHO05D007863 1.2e-147 527.3 485 56.3
Phvul.011G057100 Phaseolus vulgaris HOM05D006389 ORTHO05D007863 2.3e-146 523.1 476 55.0
FAN16G0020 Fragaria x ananassa HOM05D006389 ORTHO05D007863 3.9e-146 522.3 488 54.5
Nitab4.5_0000175g0150 Nicotiana tabacum HOM05D006389 ORTHO05D007863 3.9e-146 522.3 287 89.2
Aqoxy1G00204 Aquilegia oxysepala HOM05D006389 ORTHO05D007863 5.1e-146 521.9 480 55.8
Hund22074 Selenicereus undatus HOM05D006389 ORTHO05D007863 3.3e-145 519.2 480 53.3
VMungo1127G1170 Vigna mungo HOM05D006389 ORTHO05D007863 2.8e-144 516.2 519 51.4
Lalb_Chr03g0026221 Lupinus albus HOM05D006389 ORTHO05D007863 3.7e-144 515.8 477 54.5
Solyc11g045510.3 Solanum lycopersicum HOM05D006389 ORTHO05D007863 3.4e-142 509.2 287 87.8
HanXRQChr13g0407081 Helianthus annuus HOM05D006389 ORTHO05D007863 4.5e-142 508.8 489 54.6
Sabra01G0011800 Salix brachista HOM05D006389 ORTHO05D007863 5.5e-140 501.9 526 49.2
SalBow4G2322 Salvia bowleyana HOM05D006389 ORTHO05D007863 3.0e-138 496.1 508 50.6
HanXRQChr13g0407091 Helianthus annuus HOM05D006389 ORTHO05D007863 3.3e-137 492.7 487 54.0
HanXRQChr14g0453091 Helianthus annuus HOM05D006389 ORTHO05D007863 7.4e-137 491.5 529 50.9
THA.LOC104799096 Tarenaya hassleriana HOM05D006389 ORTHO05D007863 1.3e-136 490.7 473 51.2
vmacro04176 Vaccinium macrocarpon HOM05D006389 ORTHO05D007863 2.8e-136 489.6 392 62.0
Lsat_1_v5_gn_2_101040 Lactuca sativa HOM05D006389 ORTHO05D007863 3.7e-136 489.2 487 54.0
Cpa.g.sc84.94 Carica papaya HOM05D006389 ORTHO05D007863 1.4e-135 487.3 485 49.1
Sc16g0011670 Simmondsia chinensis HOM05D006389 ORTHO05D007863 1.4e-135 487.3 398 60.3
Haze_10646 Corylus avellana HOM05D006389 ORTHO05D007863 1.7e-133 480.3 561 46.2
C03p06650 Brassica napus HOM05D006389 ORTHO05D007863 1.2e-131 474.2 471 48.4
Medtr4g066000 Medicago truncatula HOM05D006389 ORTHO05D007863 3.6e-131 472.6 479 50.5
Lj3g0001596 Lotus japonicus HOM05D006389 ORTHO05D007863 3.0e-130 469.5 476 50.2
FAN25G0313 Fragaria x ananassa HOM05D006389 ORTHO05D007863 1.1e-129 467.6 494 50.6
BcaB01g05390 Brassica carinata HOM05D006389 ORTHO05D007863 4.4e-129 465.7 476 47.7
A03p05690 Brassica napus HOM05D006389 ORTHO05D007863 1.7e-128 463.8 472 47.9
AT5G12920 Arabidopsis thaliana HOM05D006389 ORTHO05D007863 1.4e-127 460.7 471 48.2
Psat0s3083g0200 Pisum sativum HOM05D006389 ORTHO05D007863 1.8e-127 460.3 477 49.1
CARHR200530 Cardamine hirsuta HOM05D006389 ORTHO05D007863 1.6e-126 457.2 472 48.1
Carub.0006s1110 Capsella rubella HOM05D006389 ORTHO05D007863 2.0e-126 456.8 469 48.2
unitig_699.g19125 Utricularia gibba HOM05D006389 ORTHO05D007863 7.7e-126 454.9 366 59.6
Sp6g31040 Schrenkiella parvula HOM05D006389 ORTHO05D007863 3.8e-125 452.6 472 47.7
BolC3t13171H Brassica oleracea HOM05D006389 ORTHO05D007863 1.5e-124 450.7 511 44.8
Thecc.09G225900 Theobroma cacao HOM05D006389 ORTHO05D007863 3.2e-124 449.5 386 57.8
AL6G23480 Arabidopsis lyrata HOM05D006389 ORTHO05D007863 9.4e-124 448.0 480 47.3
Ah.02g115890 Amaranthus hybridus HOM05D006389 ORTHO05D007863 4.7e-123 445.7 479 48.4
AUR62000087 Chenopodium quinoa HOM05D006389 ORTHO05D007863 6.1e-123 445.3 471 49.9
BraA03t09908Z Brassica rapa HOM05D006389 ORTHO05D007863 1.4e-119 434.1 521 43.6
Aa31LG3G14700 Aethionema arabicum HOM05D006389 ORTHO05D007863 3.1e-119 433.0 474 45.6
Zm00001eb245730 Zea mays HOM05D006389 ORTHO05D007863 5.3e-119 432.2 478 46.9
Rhsim13G0224700 Rhododendron simsii HOM05D006389 ORTHO05D007863 1.6e-118 430.6 513 46.2
COL.COLO4_26371 Corchorus olitorius HOM05D006389 ORTHO05D007863 2.0e-118 430.3 434 52.3
TPR.G13666 Trifolium pratense HOM05D006389 ORTHO05D007863 1.3e-117 427.6 478 46.7
FAN21G1265 Fragaria x ananassa HOM05D002542 ORTHO05D005078 9.4e-116 421.4 388 55.2
MELO3C015208.2 Cucumis melo HOM05D006389 ORTHO05D007863 7.5e-113 411.8 462 48.3
AUR62043581 Chenopodium quinoa HOM05D006389 ORTHO05D007863 1.3e-112 411.0 467 48.2
Thhalv10015483m.g Eutrema salsugineum HOM05D006389 ORTHO05D007863 4.8e-112 409.1 460 44.3
Os02g0591600 Oryza sativa ssp. japonica HOM05D006389 ORTHO05D007863 2.1e-107 393.7 484 43.8
CDE06G1860 Ceratophyllum demersum HOM05D006389 ORTHO05D007863 6.1e-107 392.1 328 57.3
ATR0605G326 Amborella trichopoda HOM05D006389 ORTHO05D007863 1.8e-106 390.6 445 45.2
Hma1.2p1_0728F.1_g209350 Hydrangea macrophylla HOM05D006389 ORTHO05D007863 6.1e-99 365.5 266 65.0
HanXRQChr14g0455041 Helianthus annuus HOM05D006389 ORTHO05D007863 2.3e-98 363.6 308 58.4
Peaxi162Scf00559g00114 Petunia axillaris HOM05D006389 ORTHO05D007863 5.8e-97 359.0 185 93.0
HPP92_018945 Vanilla planifolia HOM05D006389 ORTHO05D007863 9.8e-97 358.2 470 41.9
PSO384G2577 Papaver somniferum HOM05D006389 ORTHO05D007863 3.3e-92 343.2 276 60.1
CSS0004435 Camellia sinensis var. sinensis HOM05D006389 ORTHO05D007863 1.2e-83 314.7 294 56.1
Pp3c6_27180 Physcomitrium patens HOM05D006389 ORTHO05D007863 1.2e-83 314.7 484 36.2
Eucgr.B03666 Eucalyptus grandis HOM05D006389 ORTHO05D007863 4.7e-83 312.8 289 51.6
Ca_20580_v3 Cicer arietinum L. HOM05D006389 ORTHO05D007863 5.2e-74 282.7 329 45.9
MSTRG.17573 Avicennia marina HOM05D006389 ORTHO05D007863 1.5e-73 281.2 203 65.0
Mapoly0014s0037 Marchantia polymorpha HOM05D006389 ORTHO05D007863 3.2e-71 273.5 510 33.3
Nitab4.5_0000175g0160 Nicotiana tabacum HOM05D006389 ORTHO05D007863 8.4e-64 248.8 154 79.9
Hma1.2p1_0728F.1_g209340 Hydrangea macrophylla HOM05D006389 ORTHO05D007863 4.8e-59 233.0 192 63.0
Ciclev10016567m.g Citrus clementina HOM05D006389 ORTHO05D007863 3.1e-58 230.3 228 53.5
AagrBONN_evm.TU.Sc2ySwM_228.3166 Anthoceros agrestis HOM05D006389 ORTHO05D007863 6.0e-54 216.1 456 31.4
SHI30505 Sapria himalayana HOM05D006389 ORTHO05D007863 5.1e-53 213.0 183 56.8
MBI01_g14331_MAGBIO Magnolia biondii HOM05D006389 ORTHO05D007863 1.9e-52 211.1 157 59.2
Ciclev10018279m.g Citrus clementina HOM05D006389 ORTHO05D007863 1.5e-49 201.4 164 55.5
Lj1A361T11 Lonicera japonica HOM05D006389 ORTHO05D007863 1.6e-43 181.4 164 57.9
Peaxi162Scf00185g00310 Petunia axillaris HOM05D006389 ORTHO05D007863 1.2e-41 175.3 131 68.7
CBR_g1099 Chara braunii HOM05D000019 ORTHO05D000002 2.0e-41 174.5 340 32.9
HanXRQChr14g0450961 Helianthus annuus HOM05D006389 ORTHO05D007863 1.8e-34 151.4 192 44.3
SHI30507 Sapria himalayana HOM05D006389 ORTHO05D007863 2.7e-22 110.9 91 57.1
Peaxi162Scf00559g00110 Petunia axillaris HOM05D006389 ORTHO05D007863 3.0e-21 107.5 74 71.6
CSS0015492 Camellia sinensis var. sinensis HOM05D006389 ORTHO05D007863 3.3e-20 104.0 81 59.3
vmacro04177 Vaccinium macrocarpon HOM05D006389 ORTHO05D007863 2.0e-17 94.7 83 57.8
MCO05G648 Micromonas commoda HOM05D006389 ORTHO05D007863 1.0e-16 92.4 301 26.6
HanXRQChr13g0389161 Helianthus annuus HOM05D006389 ORTHO05D007863 2.7e-14 84.3 53 71.7
arahy.Tifrunner.gnm1.ann1.RII35Q Arachis hypogaea HOM05D006389 ORTHO05D007863 6.7e-13 79.7 274 27.0
Psat4g014880 Pisum sativum HOM05D006389 ORTHO05D007863 4.8e-11 73.6 151 34.4
MBI01_g14332_MAGBIO Magnolia biondii HOM05D006389 ORTHO05D007863 7.7e-09 66.2 102 39.2
SEGI_11371 Sequoiadendron giganteum HOM05D006389 ORTHO05D007863 2.9e-08 64.3 81 42.0
SEGI_20259 Sequoiadendron giganteum HOM05D006389 ORTHO05D007863 1.2e-06 58.9 42 57.1


User provided reference genes

Program Settings