Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G40.9 Capsicum annuum HOM05D006967 ORTHO05D008692 4.0e-116 421.4 204 100.0
CAN.G40.7 Capsicum annuum HOM05D006967 ORTHO05D008692 5.6e-94 347.8 210 83.3
Sopen01g019010 Solanum pennellii HOM05D006967 ORTHO05D008692 2.0e-83 312.8 210 75.2
Solyc01g049910.4 Solanum lycopersicum HOM05D006967 ORTHO05D008692 7.6e-83 310.8 210 74.8
Solyc01g020520.4 Solanum lycopersicum HOM05D006967 ORTHO05D008692 8.4e-82 307.4 210 74.3
Sopen01g015960 Solanum pennellii HOM05D006967 ORTHO05D008692 2.4e-81 305.8 210 74.3
Nitab4.5_0000217g0010 Nicotiana tabacum HOM05D006967 ORTHO05D008692 7.3e-78 294.3 210 71.0
Nitab4.5_0001253g0030 Nicotiana tabacum HOM05D006967 ORTHO05D008692 1.2e-77 293.5 210 69.5
Peaxi162Scf00715g00310 Petunia axillaris HOM05D006967 ORTHO05D008692 2.4e-76 289.3 210 69.5
PGSC0003DMG402016926 Solanum tuberosum HOM05D006967 ORTHO05D008692 4.6e-64 248.4 181 70.2
Lj2A340G21 Lonicera japonica HOM05D006967 ORTHO05D008692 2.8e-45 186.0 207 46.9
Rhsim13G0136900 Rhododendron simsii HOM05D006967 ORTHO05D008692 1.4e-41 173.7 213 43.2
CSS0034338 Camellia sinensis var. sinensis HOM05D006967 ORTHO05D008692 1.9e-41 173.3 210 43.8
DCAR_004368 Daucus carota HOM05D006967 ORTHO05D008692 1.6e-40 170.2 210 41.9
Dinv05283 Davidia involucrata HOM05D006967 ORTHO05D008692 2.7e-40 169.5 210 41.9
CiPaw.09G141400 Carya illinoinensis HOM05D006967 ORTHO05D008692 3.9e-39 165.6 211 44.1
Haze_05177 Corylus avellana HOM05D006967 ORTHO05D008692 1.5e-38 163.7 210 39.5
FAN11G3906 Fragaria x ananassa HOM05D006967 ORTHO05D008692 5.7e-38 161.8 210 43.3
QL11p010599 Quercus lobata HOM05D006967 ORTHO05D008692 5.7e-38 161.8 211 41.2
Cc09_g04480 Coffea canephora HOM05D006967 ORTHO05D008692 1.6e-37 160.2 211 43.6
FAN21G4071 Fragaria x ananassa HOM05D006967 ORTHO05D008692 2.2e-37 159.8 210 42.4
MD10G1221200 Malus domestica HOM05D006967 ORTHO05D008692 2.2e-37 159.8 211 42.7
FvH4_3g13520 Fragaria vesca HOM05D006967 ORTHO05D008692 4.8e-37 158.7 210 43.3
Nn7g38428 Nelumbo nucifera HOM05D006967 ORTHO05D008692 6.3e-37 158.3 210 40.5
Prupe.4G123400 Prunus persica HOM05D006967 ORTHO05D008692 1.1e-36 157.5 210 43.8
Oeu008739.3 Olea europaea HOM05D006967 ORTHO05D008692 5.3e-36 155.2 219 42.0
FAN25G2282 Fragaria x ananassa HOM05D006967 ORTHO05D008692 6.9e-36 154.8 210 41.9
vmacro03578 Vaccinium macrocarpon HOM05D006967 ORTHO05D008692 9.0e-36 154.5 210 40.0
MBI10_g30431_MAGBIO Magnolia biondii HOM05D006967 ORTHO05D008692 1.2e-35 154.1 210 41.9
Thecc.05G313500 Theobroma cacao HOM05D006967 ORTHO05D008692 1.2e-35 154.1 210 39.0
Aqoxy1G01340 Aquilegia oxysepala HOM05D006967 ORTHO05D008692 3.4e-35 152.5 213 39.9
FAN16G1037 Fragaria x ananassa HOM05D006967 ORTHO05D008692 4.5e-35 152.1 210 41.4
Potri.003G157800 Populus trichocarpa HOM05D006967 ORTHO05D008692 4.5e-35 152.1 212 40.6
RcHm_v2.0_Chr5g0022471 Rosa chinensis HOM05D006967 ORTHO05D008692 4.5e-35 152.1 211 42.7
Manes.18G124500 Manihot esculenta HOM05D006967 ORTHO05D008692 1.7e-34 150.2 213 40.8
THA.LOC104806234 Tarenaya hassleriana HOM05D006967 ORTHO05D008692 2.9e-34 149.4 211 39.8
COL.COLO4_10527 Corchorus olitorius HOM05D001999 ORTHO05D001994 6.5e-34 148.3 211 38.4
Medtr8g070630 Medicago truncatula HOM05D006967 ORTHO05D008692 3.2e-33 146.0 210 38.6
Ciclev10015668m.g Citrus clementina HOM05D006967 ORTHO05D008692 5.5e-33 145.2 210 36.7
PSO541G0117 Papaver somniferum HOM05D006967 ORTHO05D008692 5.5e-33 145.2 210 36.7
PSO675G8399 Papaver somniferum HOM05D006967 ORTHO05D008692 9.4e-33 144.4 210 36.7
Gorai.013G126100 Gossypium raimondii HOM05D006967 ORTHO05D008692 1.6e-32 143.7 209 38.3
Eucgr.E04333 Eucalyptus grandis HOM05D006967 ORTHO05D008692 2.1e-32 143.3 219 37.0
Migut.G00899 Erythranthe guttata HOM05D006967 ORTHO05D008692 2.7e-32 142.9 195 42.6
Migut.K01517 Erythranthe guttata HOM05D006967 ORTHO05D008692 3.6e-32 142.5 195 42.1
Gohir.D13G112300 Gossypium hirsutum HOM05D006967 ORTHO05D008692 7.9e-32 141.4 209 37.8
CANSAT35G1213 Cannabis sativa HOM05D006967 ORTHO05D008692 2.3e-31 139.8 211 37.4
Migut.M02039 Erythranthe guttata HOM05D006967 ORTHO05D008692 6.7e-31 138.3 195 41.5
Sp7g18650 Schrenkiella parvula HOM05D006967 ORTHO05D008692 6.7e-31 138.3 201 41.3
TPR.G19829 Trifolium pratense HOM05D006967 ORTHO05D008692 6.7e-31 138.3 216 37.5
ECA238G0649 Erigeron canadensis HOM05D006967 ORTHO05D008692 8.8e-31 137.9 211 38.4
Glyma.16G096000 Glycine max HOM05D006967 ORTHO05D008692 1.1e-30 137.5 210 36.2
MSTRG.24877 Avicennia marina HOM05D006967 ORTHO05D008692 1.5e-30 137.1 210 38.1
TWI63G0275 Tripterygium wilfordii HOM05D006967 ORTHO05D008692 2.6e-30 136.3 209 36.4
Gohir.A13G109700 Gossypium hirsutum HOM05D006967 ORTHO05D008692 4.3e-30 135.6 209 36.4
AT4G20310 Arabidopsis thaliana HOM05D006967 ORTHO05D008692 5.7e-30 135.2 213 39.4
CARHR227130 Cardamine hirsuta HOM05D006967 ORTHO05D008692 2.8e-29 132.9 200 38.0
AUR62032339 Chenopodium quinoa HOM05D006967 ORTHO05D008692 2.8e-29 132.9 210 38.6
BcaC09g51322 Brassica carinata HOM05D006967 ORTHO05D008692 3.7e-29 132.5 200 39.0
BcaNung03721 Brassica carinata HOM05D006967 ORTHO05D008692 3.7e-29 132.5 202 38.1
C01p14260 Brassica napus HOM05D006967 ORTHO05D008692 3.7e-29 132.5 200 39.0
BolC1t01391H Brassica oleracea HOM05D006967 ORTHO05D008692 3.7e-29 132.5 200 39.0
Lalb_Chr09g0334571 Lupinus albus HOM05D006967 ORTHO05D008692 3.7e-29 132.5 218 35.8
Duzib177G0925 Durio zibethinus HOM05D006967 ORTHO05D008692 4.8e-29 132.1 191 37.7
Aa31LG6G2720 Aethionema arabicum HOM05D006967 ORTHO05D008692 8.2e-29 131.3 212 35.8
A01p12010 Brassica napus HOM05D006967 ORTHO05D008692 8.2e-29 131.3 200 39.0
BraA01t01143Z Brassica rapa HOM05D006967 ORTHO05D008692 8.2e-29 131.3 200 39.0
Lj4g0002657 Lotus japonicus HOM05D006967 ORTHO05D008692 8.2e-29 131.3 213 35.7
Sc05g0001460 Simmondsia chinensis HOM05D006967 ORTHO05D008692 8.2e-29 131.3 211 37.4
BcaNung03720 Brassica carinata HOM05D006967 ORTHO05D008692 1.1e-28 131.0 202 37.6
Carub.0007s2087 Capsella rubella HOM05D006967 ORTHO05D008692 2.4e-28 129.8 201 38.8
Thhalv10024898m.g Eutrema salsugineum HOM05D006967 ORTHO05D008692 2.4e-28 129.8 202 39.6
AL7G33600 Arabidopsis lyrata HOM05D006967 ORTHO05D008692 4.1e-28 129.0 200 38.0
AUR62028614 Chenopodium quinoa HOM05D006967 ORTHO05D008692 4.1e-28 129.0 200 37.5
Ah.11g050600 Amaranthus hybridus HOM05D006967 ORTHO05D008692 2.0e-27 126.7 202 38.6
HanXRQChr14g0439851 Helianthus annuus HOM05D006967 ORTHO05D008692 3.4e-27 125.9 210 34.3
Phvul.003G274600 Phaseolus vulgaris HOM05D006967 ORTHO05D008692 3.4e-27 125.9 202 36.1
Sed0023777 Sechium edule HOM05D006967 ORTHO05D008692 5.9e-27 125.2 212 32.5
arahy.Tifrunner.gnm1.ann1.B3JMJ8 Arachis hypogaea HOM05D006967 ORTHO05D008692 2.9e-26 122.9 223 33.2
SHI28117 Sapria himalayana HOM05D006967 ORTHO05D008692 1.9e-25 120.2 202 34.2
Cpa.g.sc30.57 Carica papaya HOM05D006967 ORTHO05D008692 7.2e-25 118.2 194 35.6
MELO3C005917.2 Cucumis melo HOM05D006967 ORTHO05D008692 1.2e-24 117.5 212 32.1
EL10Ac5g10560 Beta vulgaris HOM05D006967 ORTHO05D008692 2.1e-24 116.7 237 32.9
Sabra03G0114400 Salix brachista HOM05D006967 ORTHO05D008692 4.7e-24 115.5 195 37.4
ClCG01G000040 Citrullus lanatus HOM05D006967 ORTHO05D008692 1.4e-23 114.0 212 31.6
CsaV3_5G000140 Cucumis sativus L. HOM05D006967 ORTHO05D008692 6.7e-23 111.7 212 29.7
HPP92_009939 Vanilla planifolia HOM05D006967 ORTHO05D008692 8.8e-23 111.3 193 34.7
ATR0737G179 Amborella trichopoda HOM05D006967 ORTHO05D008692 1.1e-22 110.9 198 34.8
VMungo0251G0412 Vigna mungo HOM05D006967 ORTHO05D008692 3.7e-21 105.9 202 34.7
arahy.Tifrunner.gnm1.ann1.IV6A0X Arachis hypogaea HOM05D006967 ORTHO05D008692 1.4e-20 104.0 193 34.7
arahy.Tifrunner.gnm1.ann1.S5Z5QJ Arachis hypogaea HOM05D006967 ORTHO05D008692 1.4e-20 104.0 193 34.7
Hund09497 Selenicereus undatus HOM05D006967 ORTHO05D008692 4.5e-19 99.0 194 35.6
Potri.001G073200 Populus trichocarpa HOM05D006967 ORTHO05D008692 1.0e-18 97.8 181 34.8
SEGI_11534 Sequoiadendron giganteum HOM05D006967 ORTHO05D008692 1.9e-17 93.6 211 28.4
TAR624G0936 Trochodendron aralioides HOM05D006967 ORTHO05D008692 4.7e-16 89.0 66 62.1
TAR624G1073 Trochodendron aralioides HOM05D006967 ORTHO05D008692 1.8e-15 87.0 116 37.1
SGA_v2.0_scaffold62G21391 Striga asiatica HOM05D006967 ORTHO05D008692 2.6e-14 83.2 208 34.1
AagrBONN_evm.TU.Sc2ySwM_368.2736 Anthoceros agrestis HOM05D006967 ORTHO05D008692 5.0e-10 68.9 115 36.5
Os01g0654200 Oryza sativa ssp. japonica HOM05D006967 ORTHO05D008692 1.1e-09 67.8 179 30.7
HPP92_007230 Vanilla planifolia HOM05D006967 ORTHO05D008692 1.5e-06 57.4 161 27.3
Zm00001eb158090 Zea mays HOM05D006967 ORTHO05D008692 2.6e-06 56.6 87 34.5


User provided reference genes

Program Settings