Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G396.4 Capsicum annuum HOM05D005375 ORTHO05D006598 8.4e-63 243.8 151 100.0
CAN.G4023.1 Capsicum annuum HOM05D005375 ORTHO05D006598 3.5e-45 185.3 90 100.0
CAN.G396.14 Capsicum annuum HOM05D005375 ORTHO05D006598 4.5e-40 168.3 117 96.6
Nitab4.5_0004445g0070 Nicotiana tabacum HOM05D005375 ORTHO05D006598 1.1e-19 100.5 125 50.4
CSS0031566 Camellia sinensis var. sinensis HOM05D005375 ORTHO05D006598 3.3e-19 99.0 112 51.8
CSS0021148 Camellia sinensis var. sinensis HOM05D005375 ORTHO05D006598 9.7e-19 97.4 110 51.8
Nitab4.5_0005078g0020 Nicotiana tabacum HOM05D005375 ORTHO05D006598 9.7e-19 97.4 124 47.6
Actinidia05060 Actinidia chinensis HOM05D005375 ORTHO05D006598 1.7e-18 96.7 116 48.3
Rhsim06G0223700 Rhododendron simsii HOM05D005375 ORTHO05D006598 1.7e-18 96.7 112 50.9
Dinv40796 Davidia involucrata HOM05D005375 ORTHO05D006598 2.8e-18 95.9 124 46.8
AUR62015884 Chenopodium quinoa HOM05D005375 ORTHO05D006598 6.3e-18 94.7 101 52.5
AUR62020339 Chenopodium quinoa HOM05D005375 ORTHO05D006598 6.3e-18 94.7 101 52.5
Cpa.g.sc284.2 Carica papaya HOM05D005375 ORTHO05D006598 1.1e-17 94.0 103 52.4
MSTRG.12999 Avicennia marina HOM05D005375 ORTHO05D006598 1.8e-17 93.2 124 43.5
PGSC0003DMG400022298 Solanum tuberosum HOM05D005375 ORTHO05D006598 1.8e-17 93.2 124 45.2
CSS0047507 Camellia sinensis var. sinensis HOM05D005375 ORTHO05D006598 3.1e-17 92.4 128 46.1
Nitab4.5_0001160g0010 Nicotiana tabacum HOM05D005375 ORTHO05D006598 3.1e-17 92.4 124 44.4
TWI38G0072 Tripterygium wilfordii HOM05D005375 ORTHO05D006598 3.1e-17 92.4 112 50.0
Gohir.D05G374900 Gossypium hirsutum HOM05D005375 ORTHO05D006598 7.0e-17 91.3 108 47.2
Gorai.009G443800 Gossypium raimondii HOM05D005375 ORTHO05D006598 7.0e-17 91.3 108 47.2
unitig_747.g21591 Utricularia gibba HOM05D005375 ORTHO05D006598 7.0e-17 91.3 126 43.7
Atru.chr2.3553 Acer truncatum HOM05D005375 ORTHO05D006598 9.1e-17 90.9 134 44.0
Migut.M01705 Erythranthe guttata HOM05D005375 ORTHO05D006598 9.1e-17 90.9 115 46.1
Atru.chr2.3534 Acer truncatum HOM05D005375 ORTHO05D006598 1.2e-16 90.5 134 44.0
COL.COLO4_09738 Corchorus olitorius HOM05D005375 ORTHO05D006598 1.2e-16 90.5 112 47.3
EL10Ac4g07689 Beta vulgaris HOM05D005375 ORTHO05D006598 1.6e-16 90.1 101 51.5
Cc05_g14340 Coffea canephora HOM05D005375 ORTHO05D006598 1.6e-16 90.1 102 49.0
Gohir.A04G011700 Gossypium hirsutum HOM05D005375 ORTHO05D006598 1.6e-16 90.1 102 48.0
HanXRQChr13g0408271 Helianthus annuus HOM05D005375 ORTHO05D006598 1.6e-16 90.1 101 50.5
Nitab4.5_0007749g0010 Nicotiana tabacum HOM05D005375 ORTHO05D006598 1.6e-16 90.1 124 43.5
CAN.G337.55 Capsicum annuum HOM05D005375 ORTHO05D006598 2.0e-16 89.7 124 44.4
Cfa020276 Carpinus fangiana HOM05D005375 ORTHO05D006598 2.0e-16 89.7 102 49.0
MELO3C014172.2 Cucumis melo HOM05D005375 ORTHO05D006598 2.0e-16 89.7 114 48.2
QL08p007584 Quercus lobata HOM05D005375 ORTHO05D006598 2.0e-16 89.7 107 48.6
CsaV3_3G004730 Cucumis sativus L. HOM05D005375 ORTHO05D006598 2.6e-16 89.4 102 51.0
CSS0025851 Camellia sinensis var. sinensis HOM05D005375 ORTHO05D006598 3.5e-16 89.0 103 49.5
Dinv22229 Davidia involucrata HOM05D005375 ORTHO05D006598 3.5e-16 89.0 112 48.2
Solyc07g064980.3 Solanum lycopersicum HOM05D005375 ORTHO05D006598 4.5e-16 88.6 124 43.5
Thecc.07G027900 Theobroma cacao HOM05D005375 ORTHO05D006598 4.5e-16 88.6 112 47.3
CiPaw.11G194800 Carya illinoinensis HOM05D005375 ORTHO05D006598 5.9e-16 88.2 102 49.0
ClCG10G005050 Citrullus lanatus HOM05D005375 ORTHO05D006598 5.9e-16 88.2 102 51.0
Lsat_1_v5_gn_9_90720 Lactuca sativa HOM05D005375 ORTHO05D006598 5.9e-16 88.2 101 48.5
Sopen07g033190 Solanum pennellii HOM05D005375 ORTHO05D006598 5.9e-16 88.2 102 48.0
Peaxi162Scf00235g00721 Petunia axillaris HOM05D005375 ORTHO05D006598 7.7e-16 87.8 130 43.1
Manes.03G136300 Manihot esculenta HOM05D005375 ORTHO05D006598 1.0e-15 87.4 102 49.0
vmacro22307 Vaccinium macrocarpon HOM05D005375 ORTHO05D006598 1.0e-15 87.4 124 43.5
Ciclev10008309m.g Citrus clementina HOM05D005375 ORTHO05D006598 1.3e-15 87.0 134 41.8
Duzib268G0742 Durio zibethinus HOM05D005375 ORTHO05D006598 1.3e-15 87.0 102 49.0
SGA_v2.0_scaffold8G04388 Striga asiatica HOM05D005375 ORTHO05D006598 1.3e-15 87.0 102 47.1
Aqoxy1G04123 Aquilegia oxysepala HOM05D005375 ORTHO05D006598 1.7e-15 86.7 134 42.5
DCAR_016648 Daucus carota HOM05D005375 ORTHO05D006598 2.9e-15 85.9 112 47.3
HanXRQChr03g0076881 Helianthus annuus HOM05D005375 ORTHO05D006598 2.9e-15 85.9 99 49.5
ATR1101G026 Amborella trichopoda HOM05D005375 ORTHO05D006598 3.8e-15 85.5 127 42.5
Lj1C881T5 Lonicera japonica HOM05D005375 ORTHO05D006598 3.8e-15 85.5 99 48.5
PGR031G3708 Punica granatum HOM05D005375 ORTHO05D006598 5.0e-15 85.1 112 46.4
MSTRG.6961 Avicennia marina HOM05D005375 ORTHO05D006598 6.5e-15 84.7 112 45.5
DCAR_022591 Daucus carota HOM05D005375 ORTHO05D006598 6.5e-15 84.7 99 49.5
Lalb_Chr00c48g0413001 Lupinus albus HOM05D005375 ORTHO05D006598 6.5e-15 84.7 70 61.4
MD03G1294800 Malus domestica HOM05D005375 ORTHO05D006598 6.5e-15 84.7 122 43.4
Nn1g07350 Nelumbo nucifera HOM05D005375 ORTHO05D006598 6.5e-15 84.7 112 47.3
Hma1.2p1_1332F.1_g276150 Hydrangea macrophylla HOM05D005375 ORTHO05D006598 8.5e-15 84.3 103 46.6
CDE07G0643 Ceratophyllum demersum HOM05D005375 ORTHO05D006598 1.1e-14 84.0 102 45.1
Duzib170G0122 Durio zibethinus HOM05D005375 ORTHO05D006598 1.1e-14 84.0 112 46.4
SMO271G0101 Selaginella moellendorffii HOM05D005375 ORTHO05D006598 1.5e-14 83.6 102 46.1
Prupe.8G266900 Prunus persica HOM05D005375 ORTHO05D006598 1.9e-14 83.2 122 41.8
Sed0014032 Sechium edule HOM05D005375 ORTHO05D006598 1.9e-14 83.2 102 48.0
ECA240G0086 Erigeron canadensis HOM05D005375 ORTHO05D006598 2.5e-14 82.8 99 48.5
Eucgr.F03508 Eucalyptus grandis HOM05D005375 ORTHO05D006598 2.5e-14 82.8 112 45.5
Medtr5g093880 Medicago truncatula HOM05D005375 ORTHO05D006598 2.5e-14 82.8 138 40.6
THA.LOC104811633 Tarenaya hassleriana HOM05D005375 ORTHO05D006598 2.5e-14 82.8 120 42.5
TAR627G0180 Trochodendron aralioides HOM05D005375 ORTHO05D006598 3.2e-14 82.4 102 46.1
GSVIVG01037729001 Vitis vinifera HOM05D005375 ORTHO05D006598 3.2e-14 82.4 102 47.1
MD00G1179000 Malus domestica HOM05D005375 ORTHO05D006598 4.2e-14 82.0 122 41.8
LjContig00272g0009776 Lotus japonicus HOM05D005375 ORTHO05D006598 5.5e-14 81.6 113 44.2
Sabra11G0065600 Salix brachista HOM05D005375 ORTHO05D006598 5.5e-14 81.6 123 44.7
TAR629G0374 Trochodendron aralioides HOM05D005375 ORTHO05D006598 7.2e-14 81.3 102 46.1
FvH4_5g39180 Fragaria vesca HOM05D005375 ORTHO05D006598 1.2e-13 80.5 121 41.3
FAN04G2161 Fragaria x ananassa HOM05D005375 ORTHO05D006598 1.2e-13 80.5 121 41.3
FAN08G1518 Fragaria x ananassa HOM05D005375 ORTHO05D006598 1.2e-13 80.5 121 41.3
FAN13G1970 Fragaria x ananassa HOM05D005375 ORTHO05D006598 1.2e-13 80.5 121 41.3
FAN18G4382 Fragaria x ananassa HOM05D005375 ORTHO05D006598 1.2e-13 80.5 121 41.3
Phvul.008G272700 Phaseolus vulgaris HOM05D005375 ORTHO05D006598 1.2e-13 80.5 123 40.7
AT4G26750 Arabidopsis thaliana HOM05D005375 ORTHO05D006598 1.6e-13 80.1 120 41.7
CANSAT11G2127 Cannabis sativa HOM05D005375 ORTHO05D006598 1.6e-13 80.1 102 46.1
Potri.011G082000 Populus trichocarpa HOM05D005375 ORTHO05D006598 1.6e-13 80.1 125 41.6
VMungo0647G1984 Vigna mungo HOM05D005375 ORTHO05D006598 1.6e-13 80.1 102 44.1
Migut.H01791 Erythranthe guttata HOM05D005375 ORTHO05D006598 2.1e-13 79.7 124 39.5
SEGI_32868 Sequoiadendron giganteum HOM05D005375 ORTHO05D006598 2.1e-13 79.7 101 43.6
HPP92_015778 Vanilla planifolia HOM05D005375 ORTHO05D006598 2.1e-13 79.7 99 46.5
Zm00001eb281230 Zea mays HOM05D005375 ORTHO05D006598 2.1e-13 79.7 99 46.5
CARHR234370 Cardamine hirsuta HOM05D005375 ORTHO05D006598 2.7e-13 79.3 122 38.5
Psat2g009920 Pisum sativum HOM05D005375 ORTHO05D006598 2.7e-13 79.3 102 44.1
PGR031G2801 Punica granatum HOM05D005375 ORTHO05D006598 2.7e-13 79.3 105 47.6
RcHm_v2.0_Chr7g0241441 Rosa chinensis HOM05D005375 ORTHO05D006598 2.7e-13 79.3 102 45.1
C01p22820 Brassica napus HOM05D000504 ORTHO05D006598 3.6e-13 79.0 123 41.5
Glyma.02G295200 Glycine max HOM05D005375 ORTHO05D006598 3.6e-13 79.0 122 39.3
Glyma.14G018200 Glycine max HOM05D005375 ORTHO05D006598 3.6e-13 79.0 122 39.3
Sp7g24730 Schrenkiella parvula HOM05D005375 ORTHO05D006598 3.6e-13 79.0 123 41.5
Gohir.D01G071200 Gossypium hirsutum HOM05D005375 ORTHO05D006598 4.7e-13 78.6 103 45.6
Gorai.002G093900 Gossypium raimondii HOM05D005375 ORTHO05D006598 4.7e-13 78.6 103 45.6
Os06g0308800 Oryza sativa ssp. japonica HOM05D005375 ORTHO05D006598 6.1e-13 78.2 99 45.5
PSO302G0025 Papaver somniferum HOM05D005375 ORTHO05D006598 8.0e-13 77.8 99 44.4
Aa31LG5G12180 Aethionema arabicum HOM05D005375 ORTHO05D006598 1.0e-12 77.4 117 40.2
Lj6g0028194 Lotus japonicus HOM05D005375 ORTHO05D006598 1.0e-12 77.4 102 42.2
Lalb_Chr04g0248131 Lupinus albus HOM05D005375 ORTHO05D006598 1.0e-12 77.4 112 42.0
Lalb_Chr00c48g0412951 Lupinus albus HOM05D005375 ORTHO05D006598 1.4e-12 77.0 102 43.1
TPR.G35360 Trifolium pratense HOM05D005375 ORTHO05D006598 1.4e-12 77.0 112 42.0
AL7G26080 Arabidopsis lyrata HOM05D005375 ORTHO05D006598 1.8e-12 76.6 120 40.8
BolC1t02212H Brassica oleracea HOM05D005375 ORTHO05D006598 1.8e-12 76.6 123 40.7
Thhalv10025139m.g Eutrema salsugineum HOM05D005375 ORTHO05D006598 1.8e-12 76.6 123 40.7
Gohir.A01G084800 Gossypium hirsutum HOM05D005375 ORTHO05D006598 1.8e-12 76.6 103 44.7
A01p18000 Brassica napus HOM05D000504 ORTHO05D000403 2.3e-12 76.3 122 39.3
BraA01t01755Z Brassica rapa HOM05D000504 ORTHO05D000403 2.3e-12 76.3 122 39.3
BcaC09g52262 Brassica carinata HOM05D005375 ORTHO05D006598 4.0e-12 75.5 121 40.5
Carub.0007s1409 Capsella rubella HOM05D005375 ORTHO05D006598 4.0e-12 75.5 122 38.5
Ca_06349_v3 Cicer arietinum L. HOM05D005375 ORTHO05D006598 4.0e-12 75.5 113 41.6
Mapoly0043s0080 Marchantia polymorpha HOM05D005375 ORTHO05D006598 8.8e-12 74.3 101 40.6
PSO210G0227 Papaver somniferum HOM05D005375 ORTHO05D006598 8.8e-12 74.3 134 37.3
Lj8A173T72 Lonicera japonica HOM05D005375 ORTHO05D006598 1.5e-11 73.6 99 46.5
CDE04G3304 Ceratophyllum demersum HOM05D005375 ORTHO05D006598 2.6e-11 72.8 102 40.2
AagrBONN_evm.TU.Sc2ySwM_368.1760 Anthoceros agrestis HOM05D005375 ORTHO05D006598 3.3e-11 72.4 99 40.4
TAR624G1027 Trochodendron aralioides HOM05D005375 ORTHO05D006598 4.4e-11 72.0 104 44.2
Actinidia37374 Actinidia chinensis HOM05D005375 ORTHO05D006598 1.1e-09 67.4 48 68.8
Nn1g03334 Nelumbo nucifera HOM05D005375 ORTHO05D006598 1.1e-09 67.4 44 68.2
Actinidia32285 Actinidia chinensis HOM05D005375 ORTHO05D006598 1.4e-09 67.0 62 53.2
SHI26566 Sapria himalayana HOM05D005375 ORTHO05D006598 7.0e-09 64.7 118 36.4
Pp3c12_1420 Physcomitrium patens HOM05D005375 ORTHO05D006598 2.0e-08 63.2 99 38.4
Sc16g0005720 Simmondsia chinensis HOM05D005375 ORTHO05D006598 3.5e-08 62.4 48 64.6
Oeu054311.1 Olea europaea HOM05D005375 ORTHO05D006598 2.2e-07 59.7 107 35.5


User provided reference genes

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