Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G36.7 Capsicum annuum HOM05D010939 ORTHO05D013055 1.3e-94 349.7 174 100.0
CAN.G36.6 Capsicum annuum HOM05D010939 ORTHO05D013055 1.3e-38 163.7 152 59.9
Nitab4.5_0000757g0080 Nicotiana tabacum HOM05D010939 ORTHO05D013055 1.9e-34 149.8 172 51.2
Nitab4.5_0000757g0070 Nicotiana tabacum HOM05D010939 ORTHO05D013055 3.2e-34 149.1 172 51.2
Nitab4.5_0024229g0010 Nicotiana tabacum HOM05D010939 ORTHO05D013055 3.6e-33 145.6 141 58.2
Nitab4.5_0003936g0010 Nicotiana tabacum HOM05D010939 ORTHO05D013055 6.1e-33 144.8 171 51.5
Nitab4.5_0007363g0010 Nicotiana tabacum HOM05D010939 ORTHO05D013055 1.0e-32 144.1 171 51.5
CAN.G36.8 Capsicum annuum HOM05D010939 ORTHO05D013055 2.0e-31 139.8 177 46.3
PGSC0003DMG400031548 Solanum tuberosum HOM05D010939 ORTHO05D013055 2.6e-31 139.4 176 46.6
CAN.G36.9 Capsicum annuum HOM05D010939 ORTHO05D013055 1.4e-29 133.7 143 48.3
Sopen01g001430 Solanum pennellii HOM05D010939 ORTHO05D013055 1.2e-28 130.6 144 53.5
Solyc01g005420.2 Solanum lycopersicum HOM05D010939 ORTHO05D013055 3.5e-28 129.0 142 53.5
Peaxi162Scf00013g00055 Petunia axillaris HOM05D010939 ORTHO05D013055 1.3e-27 127.1 149 49.7
Nitab4.5_0000238g0020 Nicotiana tabacum HOM05D010939 ORTHO05D013055 1.4e-24 117.1 168 41.1
Nitab4.5_0000238g0030 Nicotiana tabacum HOM05D010939 ORTHO05D013055 6.3e-22 108.2 88 64.8
Peaxi162Scf00196g00211 Petunia axillaris HOM05D010939 ORTHO05D013055 1.1e-21 107.5 150 44.7
PGSC0003DMG400009734 Solanum tuberosum HOM05D010939 ORTHO05D013055 4.1e-21 105.5 62 83.9
Cc10_g10850 Coffea canephora HOM05D000865 ORTHO05D000739 2.9e-19 99.4 146 40.4
Peaxi162Scf00196g00224 Petunia axillaris HOM05D010939 ORTHO05D013055 2.9e-19 99.4 172 38.4
Cc10_g10870 Coffea canephora HOM05D000865 ORTHO05D000739 8.6e-19 97.8 132 43.2
Hma1.2p1_0009F.1_g006160 Hydrangea macrophylla HOM05D000865 ORTHO05D000739 6.8e-16 88.2 143 39.2
Dinv27368 Davidia involucrata HOM05D000865 ORTHO05D000739 5.8e-15 85.1 138 38.4
Hma1.2p1_0009F.1_g006170 Hydrangea macrophylla HOM05D000865 ORTHO05D000739 9.8e-15 84.3 146 38.4
SalBow7G2794 Salvia bowleyana HOM05D000865 ORTHO05D000739 9.8e-15 84.3 113 40.7
SalBow7G1372 Salvia bowleyana HOM05D000865 ORTHO05D000739 2.9e-14 82.8 112 41.1
Dinv27367 Davidia involucrata HOM05D000865 ORTHO05D000739 3.7e-14 82.4 145 36.6
Migut.N03304 Erythranthe guttata HOM05D000865 ORTHO05D000739 4.9e-14 82.0 147 35.4
Oeu030040.1 Olea europaea HOM05D000865 ORTHO05D000739 6.4e-14 81.6 139 37.4
Actinidia04740 Actinidia chinensis HOM05D000865 ORTHO05D000739 1.1e-13 80.9 152 32.9
CAN.G392.2 Capsicum annuum HOM05D000865 ORTHO05D000739 1.4e-13 80.5 143 34.3
ECA236G0710 Erigeron canadensis HOM05D000865 ORTHO05D000739 1.8e-13 80.1 146 35.6
Actinidia14181 Actinidia chinensis HOM05D000865 ORTHO05D000739 2.4e-13 79.7 152 32.9
CANSAT54G1245 Cannabis sativa HOM05D000865 ORTHO05D000739 2.4e-13 79.7 159 36.5
Dinv27365 Davidia involucrata HOM05D000865 ORTHO05D000739 2.4e-13 79.7 106 40.6
Dinv27366 Davidia involucrata HOM05D000865 ORTHO05D000739 2.4e-13 79.7 106 40.6
Migut.N03310 Erythranthe guttata HOM05D000865 ORTHO05D000739 3.2e-13 79.3 101 41.6
CSS0024986 Camellia sinensis var. sinensis HOM05D000865 ORTHO05D000739 5.4e-13 78.6 144 34.7
SGA_v2.0_scaffold25G11102 Striga asiatica HOM05D000865 ORTHO05D000739 5.4e-13 78.6 149 35.6
CAN.G903.3 Capsicum annuum HOM05D000865 ORTHO05D000739 7.0e-13 78.2 143 33.6
SalBow6G3095 Salvia bowleyana HOM05D000865 ORTHO05D000739 7.0e-13 78.2 147 33.3
Oeu017725.1 Olea europaea HOM05D000865 ORTHO05D000739 2.0e-12 76.6 143 34.3
SalBow7G1730 Salvia bowleyana HOM05D000865 ORTHO05D000739 2.0e-12 76.6 107 37.4
SalBow7G3635 Salvia bowleyana HOM05D000865 ORTHO05D000739 2.0e-12 76.6 107 37.4
Migut.N03305 Erythranthe guttata HOM05D000865 ORTHO05D000739 3.5e-12 75.9 139 33.8
Dinv27360 Davidia involucrata HOM05D000865 ORTHO05D000739 4.6e-12 75.5 93 44.1
SalBow7G1104 Salvia bowleyana HOM05D000865 ORTHO05D000739 4.6e-12 75.5 142 35.9
Solyc11g013250.1 Solanum lycopersicum HOM05D000865 ORTHO05D000739 4.6e-12 75.5 143 32.2
GSVIVG01037484001 Vitis vinifera HOM05D000865 ORTHO05D000739 4.6e-12 75.5 143 32.9
Lsat_1_v5_gn_8_103180 Lactuca sativa HOM05D000865 ORTHO05D000739 6.0e-12 75.1 146 34.9
Sopen11g008270 Solanum pennellii HOM05D000865 ORTHO05D000739 6.0e-12 75.1 143 32.2
Migut.N03306 Erythranthe guttata HOM05D000865 ORTHO05D000739 7.8e-12 74.7 147 31.3
Peaxi162Scf00014g00113 Petunia axillaris HOM05D000865 ORTHO05D000739 1.0e-11 74.3 143 31.5
SalBow7G1310 Salvia bowleyana HOM05D000865 ORTHO05D000739 1.0e-11 74.3 142 34.5
Actinidia02602 Actinidia chinensis HOM05D000865 ORTHO05D000739 1.3e-11 73.9 143 33.6
Nitab4.5_0000051g0380 Nicotiana tabacum HOM05D000865 ORTHO05D000739 1.3e-11 73.9 143 32.9
DCAR_014116 Daucus carota HOM05D000865 ORTHO05D000739 1.7e-11 73.6 146 33.6
Dinv27369 Davidia involucrata HOM05D000865 ORTHO05D000739 1.7e-11 73.6 108 37.0
Migut.C01169 Erythranthe guttata HOM05D000865 ORTHO05D000739 1.7e-11 73.6 144 30.6
Oeu030038.1 Olea europaea HOM05D000865 ORTHO05D000739 1.7e-11 73.6 143 31.5
Lj4g0012125 Lotus japonicus HOM05D000865 ORTHO05D000739 3.9e-11 72.4 153 32.7
PGSC0003DMG400029026 Solanum tuberosum HOM05D000865 ORTHO05D000739 3.9e-11 72.4 143 30.8
Actinidia09155 Actinidia chinensis HOM05D038971 ORTHO05D000739 6.6e-11 71.6 155 32.3
HanXRQChr01g0027071 Helianthus annuus HOM05D000865 ORTHO05D000739 1.1e-10 70.9 146 34.2
Peaxi162Scf00028g00117 Petunia axillaris HOM05D000865 ORTHO05D000739 1.1e-10 70.9 143 32.2
SalBow7G3275 Salvia bowleyana HOM05D000865 ORTHO05D000739 1.1e-10 70.9 143 30.8
Dinv27362 Davidia involucrata HOM05D000865 ORTHO05D000739 1.5e-10 70.5 125 36.0
Peaxi162Scf00014g00122 Petunia axillaris HOM05D000865 ORTHO05D000739 1.5e-10 70.5 143 31.5
Manes.15G013300 Manihot esculenta HOM05D000865 ORTHO05D000739 1.9e-10 70.1 143 35.7
SalBow7G0931 Salvia bowleyana HOM05D000865 ORTHO05D000739 1.9e-10 70.1 144 33.3
SalBow7G3084 Salvia bowleyana HOM05D000865 ORTHO05D000739 1.9e-10 70.1 144 33.3
Cc00_g25620 Coffea canephora HOM05D000865 ORTHO05D000739 2.5e-10 69.7 143 32.9
SalBow2G1137 Salvia bowleyana HOM05D000865 ORTHO05D000739 2.5e-10 69.7 186 30.1
DCAR_009673 Daucus carota HOM05D000865 ORTHO05D000739 4.3e-10 68.9 100 39.0
Oeu017726.1 Olea europaea HOM05D000865 ORTHO05D000739 4.3e-10 68.9 139 32.4
Hma1.2p1_0009F.1_g006150 Hydrangea macrophylla HOM05D000865 ORTHO05D000739 5.6e-10 68.6 146 32.9
Nn4g25898 Nelumbo nucifera HOM05D000865 ORTHO05D000739 9.5e-10 67.8 139 36.7
Sabra05G0032000 Salix brachista HOM05D000865 ORTHO05D000739 1.2e-09 67.4 155 32.9
TAR636G2581 Trochodendron aralioides HOM05D000865 ORTHO05D000739 1.2e-09 67.4 139 33.8
Aa31sc55G160 Aethionema arabicum HOM05D000865 ORTHO05D000739 2.1e-09 66.6 152 31.6
Migut.C01170 Erythranthe guttata HOM05D000865 ORTHO05D000739 2.1e-09 66.6 129 34.9
MD16G1170900 Malus domestica HOM05D000865 ORTHO05D000739 4.7e-09 65.5 161 33.5
MD13G1169800 Malus domestica HOM05D000865 ORTHO05D000739 6.2e-09 65.1 161 34.8
TWI12G0020 Tripterygium wilfordii HOM05D000865 ORTHO05D000739 6.2e-09 65.1 161 31.1
TAR362G0271 Trochodendron aralioides HOM05D000865 ORTHO05D000739 6.2e-09 65.1 139 36.7
Aqoxy2G03021 Aquilegia oxysepala HOM05D000865 ORTHO05D000739 8.0e-09 64.7 143 33.6
Lj7P313T4 Lonicera japonica HOM05D000865 ORTHO05D000739 8.0e-09 64.7 102 35.3
Lj7P315T11 Lonicera japonica HOM05D000865 ORTHO05D000739 8.0e-09 64.7 102 35.3
Duzib052G0438 Durio zibethinus HOM05D000865 ORTHO05D000739 1.1e-08 64.3 142 34.5
Lj6g0011988 Lotus japonicus HOM05D000865 ORTHO05D000739 1.8e-08 63.5 146 30.8
Cc00_g10490 Coffea canephora HOM05D000865 ORTHO05D000739 2.3e-08 63.2 143 35.0
Rhsim11G0066200 Rhododendron simsii HOM05D000865 ORTHO05D000739 3.1e-08 62.8 108 34.3
Lalb_Chr18g0051731 Lupinus albus HOM05D000865 ORTHO05D000739 4.0e-08 62.4 150 29.3
RcHm_v2.0_Chr3g0455361 Rosa chinensis HOM05D000865 ORTHO05D000739 4.0e-08 62.4 101 34.7
VMungo1215G3134 Vigna mungo HOM05D000865 ORTHO05D000739 4.0e-08 62.4 99 35.4
CANSAT25G3656 Cannabis sativa HOM05D000865 ORTHO05D000739 5.2e-08 62.0 140 30.0
TAR633G1600 Trochodendron aralioides HOM05D000865 ORTHO05D000739 5.2e-08 62.0 138 33.3
Actinidia00029 Actinidia chinensis HOM05D000865 ORTHO05D000739 6.8e-08 61.6 149 32.2
Nn4g25897 Nelumbo nucifera HOM05D000865 ORTHO05D000739 6.8e-08 61.6 103 35.9
Actinidia27047 Actinidia chinensis HOM05D000865 ORTHO05D000739 8.9e-08 61.2 148 32.4
COL.COLO4_10495 Corchorus olitorius HOM05D000865 ORTHO05D000739 8.9e-08 61.2 155 32.3
PGSC0003DMG400031547 Solanum tuberosum HOM05D010939 ORTHO05D013055 8.9e-08 61.2 38 81.6
Actinidia19783 Actinidia chinensis HOM05D003060 ORTHO05D001716 1.5e-07 60.5 157 31.2
Lj7P327T2 Lonicera japonica HOM05D000865 ORTHO05D000739 1.5e-07 60.5 98 37.8
HPP92_026256 Vanilla planifolia HOM05D000865 ORTHO05D000739 1.5e-07 60.5 150 32.7
Duzib212G0059 Durio zibethinus HOM05D000865 ORTHO05D000739 2.0e-07 60.1 142 33.8
SGA_v2.0_scaffold67G22660 Striga asiatica HOM05D000865 ORTHO05D000739 2.0e-07 60.1 155 31.6
Zm00001eb363490 Zea mays HOM05D000865 ORTHO05D000739 2.0e-07 60.1 137 32.8
AL1G19510 Arabidopsis lyrata HOM05D000865 ORTHO05D000739 2.6e-07 59.7 148 30.4
Thhalv10008221m.g Eutrema salsugineum HOM05D000865 ORTHO05D000739 2.6e-07 59.7 149 28.9
FAN22G2263 Fragaria x ananassa HOM05D000865 ORTHO05D000739 2.6e-07 59.7 145 33.1
Ca_01948_v3 Cicer arietinum L. HOM05D000865 ORTHO05D000739 3.4e-07 59.3 174 27.6
Lj7P316T4 Lonicera japonica HOM05D000865 ORTHO05D000739 3.4e-07 59.3 98 37.8
Ca_21529_v3 Cicer arietinum L. HOM05D000865 ORTHO05D000739 4.4e-07 58.9 105 31.4
Duzib177G0415 Durio zibethinus HOM05D000865 ORTHO05D000739 4.4e-07 58.9 155 33.5
AT1G09070 Arabidopsis thaliana HOM05D000865 ORTHO05D000739 5.8e-07 58.5 148 30.4
Cpa.g.sc48.80 Carica papaya HOM05D000865 ORTHO05D000739 5.8e-07 58.5 160 30.6
Eucgr.H03902 Eucalyptus grandis HOM05D000865 ORTHO05D000739 5.8e-07 58.5 161 30.4
PSO591G0270 Papaver somniferum HOM05D000865 ORTHO05D000739 5.8e-07 58.5 139 33.1
Psat1g152800 Pisum sativum HOM05D000865 ORTHO05D000739 5.8e-07 58.5 142 29.6
Dinv20011 Davidia involucrata HOM05D000039 ORTHO05D000366 7.5e-07 58.2 80 41.2
Migut.N03308 Erythranthe guttata HOM05D000865 ORTHO05D000739 7.5e-07 58.2 104 33.7
FvH4_4g17880 Fragaria vesca HOM05D000865 ORTHO05D000739 7.5e-07 58.2 145 33.1
FAN12G1524 Fragaria x ananassa HOM05D000865 ORTHO05D000739 7.5e-07 58.2 145 33.1
Glyma.07G248600 Glycine max HOM05D000865 ORTHO05D000739 7.5e-07 58.2 152 28.3
Lj7C326T3 Lonicera japonica HOM05D000865 ORTHO05D000739 7.5e-07 58.2 98 36.7
Lj7P324T10 Lonicera japonica HOM05D000865 ORTHO05D000739 7.5e-07 58.2 119 33.6
Lj7P326T18 Lonicera japonica HOM05D000865 ORTHO05D000739 7.5e-07 58.2 98 36.7
Medtr2g036030 Medicago truncatula HOM05D000865 ORTHO05D000739 7.5e-07 58.2 143 28.7
BolC8t52496H Brassica oleracea HOM05D000865 ORTHO05D000739 9.8e-07 57.8 149 30.2
BraA06t23799Z Brassica rapa HOM05D000865 ORTHO05D000739 9.8e-07 57.8 161 30.4
Lj7P315T8 Lonicera japonica HOM05D000865 ORTHO05D000739 9.8e-07 57.8 162 29.0
Lj7P325T13 Lonicera japonica HOM05D000865 ORTHO05D000739 9.8e-07 57.8 103 35.9
Oeu030041.1 Olea europaea HOM05D000865 ORTHO05D000739 9.8e-07 57.8 94 35.1
Carub.0001s0839 Capsella rubella HOM05D000865 ORTHO05D000739 1.3e-06 57.4 139 31.7
Lj7P314T10 Lonicera japonica HOM05D000865 ORTHO05D000739 1.3e-06 57.4 96 35.4
PSO832G1537 Papaver somniferum HOM05D000865 ORTHO05D000739 1.3e-06 57.4 139 33.1
RcHm_v2.0_Chr4g0422011 Rosa chinensis HOM05D000865 ORTHO05D000739 1.3e-06 57.4 143 33.6
Sp1g07670 Schrenkiella parvula HOM05D000865 ORTHO05D000739 1.3e-06 57.4 149 29.5
BcaB07g34125 Brassica carinata HOM05D000865 ORTHO05D000739 1.7e-06 57.0 153 28.8
A08p34820 Brassica napus HOM05D000865 ORTHO05D000739 1.7e-06 57.0 163 28.2
Migut.B01030 Erythranthe guttata HOM05D000865 ORTHO05D000739 1.7e-06 57.0 138 30.4
Os01g0934100 Oryza sativa ssp. japonica HOM05D000865 ORTHO05D000739 1.7e-06 57.0 152 33.6
BcaC05g24761 Brassica carinata HOM05D000865 ORTHO05D000739 2.2e-06 56.6 164 29.9
A06p05920 Brassica napus HOM05D000865 ORTHO05D000739 2.2e-06 56.6 112 33.0
A09p65600 Brassica napus HOM05D000865 ORTHO05D000739 2.2e-06 56.6 149 29.5
C05p07110 Brassica napus HOM05D000865 ORTHO05D000739 2.2e-06 56.6 164 29.9
BolC5t29466H Brassica oleracea HOM05D000865 ORTHO05D000739 2.2e-06 56.6 164 29.9
BraA09t41904Z Brassica rapa HOM05D000865 ORTHO05D000739 2.2e-06 56.6 149 29.5
CARHR008960 Cardamine hirsuta HOM05D000865 ORTHO05D000739 2.2e-06 56.6 101 33.7
Hma1.2p1_1374F.1_g278910 Hydrangea macrophylla HOM05D000865 ORTHO05D000739 2.2e-06 56.6 146 28.8
Psat4g027080 Pisum sativum HOM05D000865 ORTHO05D000739 2.2e-06 56.6 154 28.6
Sed0014054 Sechium edule HOM05D000865 ORTHO05D000739 2.2e-06 56.6 152 30.3
TPR.G26844 Trifolium pratense HOM05D000865 ORTHO05D000739 2.2e-06 56.6 140 28.6
FAN02G4228 Fragaria x ananassa HOM05D002691 ORTHO05D000739 2.9e-06 56.2 142 29.6
FAN09G1327 Fragaria x ananassa HOM05D000865 ORTHO05D000739 2.9e-06 56.2 142 29.6
Lj7C325T2 Lonicera japonica HOM05D000865 ORTHO05D000739 2.9e-06 56.2 103 35.0
MD04G1202300 Malus domestica HOM05D000865 ORTHO05D000739 2.9e-06 56.2 149 32.9
FAN05G2988 Fragaria x ananassa HOM05D000865 ORTHO05D000739 3.7e-06 55.8 142 29.6
MD02G1019900 Malus domestica HOM05D000865 ORTHO05D000739 3.7e-06 55.8 161 33.5
Thecc.05G311200 Theobroma cacao HOM05D000865 ORTHO05D000739 3.7e-06 55.8 152 33.6
TWI12G0999 Tripterygium wilfordii HOM05D000865 ORTHO05D000739 3.7e-06 55.8 153 31.4
MSTRG.1475 Avicennia marina HOM05D000865 ORTHO05D000739 4.9e-06 55.5 99 32.3
BcaC07g41905 Brassica carinata HOM05D000865 ORTHO05D000739 4.9e-06 55.5 140 30.7
C08p49670 Brassica napus HOM05D000865 ORTHO05D000739 4.9e-06 55.5 140 30.7
CSS0039085 Camellia sinensis var. sinensis HOM05D000865 ORTHO05D000739 4.9e-06 55.5 96 35.4
FvH4_6g06320 Fragaria vesca HOM05D000865 ORTHO05D000739 4.9e-06 55.5 142 29.6
FAN14G4907 Fragaria x ananassa HOM05D000865 ORTHO05D000739 4.9e-06 55.5 142 29.6
FAN17G0945 Fragaria x ananassa HOM05D000865 ORTHO05D000739 4.9e-06 55.5 145 32.4
Lj7C326G12 Lonicera japonica HOM05D000865 ORTHO05D000739 4.9e-06 55.5 103 35.0
Lj7P326T15 Lonicera japonica HOM05D000865 ORTHO05D000739 4.9e-06 55.5 98 35.7
Lj7P326T21 Lonicera japonica HOM05D000865 ORTHO05D000739 4.9e-06 55.5 98 35.7
MBI19_g13126_MAGBIO Magnolia biondii HOM05D000865 ORTHO05D000739 4.9e-06 55.5 138 32.6
unitig_699.g19675 Utricularia gibba HOM05D000865 ORTHO05D000739 4.9e-06 55.5 136 32.4
ATR0706G083 Amborella trichopoda HOM05D000865 ORTHO05D000739 6.4e-06 55.1 149 28.9
DCAR_030533 Daucus carota HOM05D000865 ORTHO05D000739 6.4e-06 55.1 149 32.2
MBI19_g00436_MAGBIO Magnolia biondii HOM05D000865 ORTHO05D000739 6.4e-06 55.1 142 31.7
BcaC05g30259 Brassica carinata HOM05D000865 ORTHO05D000739 8.3e-06 54.7 140 30.0
Prupe.6G322600 Prunus persica HOM05D000865 ORTHO05D000739 8.3e-06 54.7 103 34.0
Zm00001eb142200 Zea mays HOM05D000865 ORTHO05D000739 8.3e-06 54.7 134 33.6


User provided reference genes

Program Settings