Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G352.58 Capsicum annuum HOM05D002261 ORTHO05D002334 1.5e-101 372.9 187 100.0
CAN.G352.57 Capsicum annuum HOM05D002261 ORTHO05D002334 2.0e-82 309.3 188 86.7
Sopen09g021920 Solanum pennellii HOM05D002261 ORTHO05D002334 1.9e-40 169.9 181 51.4
PGSC0003DMG400029822 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.9e-40 169.9 179 51.4
PGSC0003DMG402010367 Solanum tuberosum HOM05D002261 ORTHO05D002334 3.3e-40 169.1 181 51.4
PGSC0003DMG401021841 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.2e-37 160.6 179 49.2
Nitab4.5_0001372g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.4e-37 159.1 183 48.6
PGSC0003DMG400020377 Solanum tuberosum HOM05D002261 ORTHO05D002334 5.9e-34 148.3 147 53.7
PGSC0003DMG400033169 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.7e-33 146.7 148 52.7
PGSC0003DMG400021867 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.2e-31 140.6 168 48.2
Solyc05g017797.1 Solanum lycopersicum HOM05D002261 ORTHO05D002334 2.8e-31 139.4 145 52.4
Solyc01g066616.1 Solanum lycopersicum HOM05D002261 ORTHO05D002334 1.5e-29 133.7 136 52.2
Solyc09g015140.2 Solanum lycopersicum HOM05D002261 ORTHO05D002334 1.5e-24 117.1 127 50.4
PGSC0003DMG400029865 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.5e-24 117.1 138 51.4
Sopen04g013910 Solanum pennellii HOM05D002261 ORTHO05D002334 1.8e-22 110.2 189 40.7
PGSC0003DMG400017712 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.8e-22 110.2 182 39.6
Nitab4.5_0011520g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.6e-18 95.5 89 53.9
Nitab4.5_0000250g0180 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.9e-17 92.4 128 45.3
Peaxi162Scf00519g00002 Petunia axillaris HOM05D002261 ORTHO05D002334 6.6e-17 91.7 184 33.2
Nitab4.5_0004971g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.5e-16 89.7 183 30.1
Solyc12g042110.3 Solanum lycopersicum HOM05D002261 ORTHO05D002334 9.5e-16 87.8 113 42.5
CAN.G765.17 Capsicum annuum HOM05D002261 ORTHO05D002334 4.7e-15 85.5 183 33.3
Cc10_g10270 Coffea canephora HOM05D017605 ORTHO05D009014 4.7e-15 85.5 183 28.4
Nitab4.5_0003673g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.1e-14 82.8 183 29.0
Nitab4.5_0001280g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 6.8e-14 81.6 177 32.2
Nitab4.5_0003349g0050 Nicotiana tabacum HOM05D002261 ORTHO05D002334 8.9e-14 81.3 193 34.2
PGSC0003DMG400041066 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.6e-13 79.7 108 38.9
Peaxi162Scf00131g00001 Petunia axillaris HOM05D002261 ORTHO05D002334 5.8e-13 78.6 149 35.6
Nitab4.5_0028843g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.3e-12 77.4 163 31.3
PGSC0003DMG400023096 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.3e-12 77.4 86 51.2
CAN.G1003.1 Capsicum annuum HOM05D002261 ORTHO05D002334 1.7e-12 77.0 67 67.2
Sopen03g007880 Solanum pennellii HOM05D000002 ORTHO05D000001 2.2e-12 76.6 101 47.5
Nitab4.5_0002141g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.9e-12 76.3 175 33.1
Sopen12g021190 Solanum pennellii HOM05D002261 ORTHO05D002334 8.4e-12 74.7 54 61.1
Nitab4.5_0012917g0020 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.4e-11 73.9 167 33.5
Sopen10g017900 Solanum pennellii HOM05D000004 ORTHO05D000002 2.4e-11 73.2 181 32.6
TAR369G0863 Trochodendron aralioides HOM05D000674 ORTHO05D001490 2.4e-11 73.2 181 28.7
Sopen12g016550 Solanum pennellii HOM05D002261 ORTHO05D002334 5.4e-11 72.0 127 38.6
CiPaw.09G042900 Carya illinoinensis HOM05D009267 ORTHO05D010384 7.1e-11 71.6 183 30.1
Nitab4.5_0011868g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 9.2e-11 71.2 195 26.2
Dinv10520 Davidia involucrata HOM05D000824 ORTHO05D010384 2.1e-10 70.1 188 26.6
Sopen10g004570 Solanum pennellii HOM05D002261 ORTHO05D002334 2.7e-10 69.7 172 29.7
CiPaw.01G012000 Carya illinoinensis HOM05D000096 ORTHO05D000045 3.5e-10 69.3 183 26.8
Nitab4.5_0011589g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.5e-10 69.3 187 29.4
PGSC0003DMG400030801 Solanum tuberosum HOM05D002261 ORTHO05D002334 3.5e-10 69.3 78 48.7
CiPaw.01G054700 Carya illinoinensis HOM05D009267 ORTHO05D010384 4.6e-10 68.9 183 30.1
CiPaw.15G057000 Carya illinoinensis HOM05D009267 ORTHO05D010384 4.6e-10 68.9 183 30.1
Nitab4.5_0007046g0020 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.6e-10 68.9 162 31.5
CiPaw.15G013500 Carya illinoinensis HOM05D009267 ORTHO05D010384 6.0e-10 68.6 183 29.5
Peaxi162Scf00158g00318 Petunia axillaris HOM05D002261 ORTHO05D002334 6.0e-10 68.6 187 33.2
Atru.chr8.1160 Acer truncatum HOM05D006612 ORTHO05D010384 7.8e-10 68.2 186 28.5
CiPaw.15G116600 Carya illinoinensis HOM05D000096 ORTHO05D010384 1.7e-09 67.0 183 29.5
Nitab4.5_0000600g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.7e-09 67.0 161 30.4
Solyc08g062250.3 Solanum lycopersicum HOM05D002538 ORTHO05D002334 3.9e-09 65.9 84 45.2
Peaxi162Scf00752g00055 Petunia axillaris HOM05D002261 ORTHO05D002334 5.1e-09 65.5 85 41.2
Peaxi162Scf00752g00068 Petunia axillaris HOM05D002261 ORTHO05D002334 5.1e-09 65.5 85 41.2
PGSC0003DMG400033635 Solanum tuberosum HOM05D002261 ORTHO05D002334 5.1e-09 65.5 78 47.4
Nitab4.5_0000091g0370 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.5e-08 63.2 162 33.3
Solyc01g066612.1 Solanum lycopersicum HOM05D002261 ORTHO05D002334 2.5e-08 63.2 56 57.1
Rhsim08G0049800 Rhododendron simsii HOM05D023805 ORTHO05D010384 3.3e-08 62.8 183 26.8
Solyc02g038640.3 Solanum lycopersicum HOM05D002261 ORTHO05D002334 3.3e-08 62.8 65 50.8
CiPaw.07G195700 Carya illinoinensis HOM05D009267 ORTHO05D010384 4.3e-08 62.4 183 28.4
Sopen04g022620 Solanum pennellii HOM05D002261 ORTHO05D002334 5.6e-08 62.0 133 36.1
Nitab4.5_0002942g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 9.6e-08 61.2 88 38.6
Dinv26739 Davidia involucrata HOM05D000824 ORTHO05D010384 1.6e-07 60.5 172 25.6
Nitab4.5_0003285g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.1e-07 60.1 114 33.3
Peaxi162Scf00224g00009 Petunia axillaris HOM05D002261 ORTHO05D002334 2.1e-07 60.1 117 35.9
Sopen09g011030 Solanum pennellii HOM05D002261 ORTHO05D002334 2.1e-07 60.1 133 34.6
Peaxi162Scf00020g01022 Petunia axillaris HOM05D002261 ORTHO05D002334 3.6e-07 59.3 127 36.2
Nitab4.5_0009868g0050 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.7e-07 58.9 155 28.4
Sopen09g026580 Solanum pennellii HOM05D002538 ORTHO05D003162 8.1e-07 58.2 70 48.6
Nitab4.5_0001899g0050 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.1e-06 57.8 111 34.2
Nitab4.5_0014440g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.1e-06 57.8 55 52.7
Nitab4.5_0016697g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.1e-06 57.8 103 34.0
Peaxi162Scf00620g00218 Petunia axillaris HOM05D002261 ORTHO05D002334 1.4e-06 57.4 46 52.2
Sopen06g019020 Solanum pennellii HOM05D002261 ORTHO05D002334 1.8e-06 57.0 125 31.2
PGSC0003DMG401008657 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.8e-06 57.0 149 28.9
Cc07_g18580 Coffea canephora HOM05D006612 ORTHO05D009014 2.4e-06 56.6 180 27.8
Sopen03g007870 Solanum pennellii HOM05D002261 ORTHO05D002334 2.4e-06 56.6 38 63.2
Nitab4.5_0002588g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.1e-06 56.2 187 28.3
Peaxi162Scf00565g00829 Petunia axillaris HOM05D002261 ORTHO05D002334 3.1e-06 56.2 182 26.9
Nitab4.5_0005642g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.2e-06 55.5 215 28.4
CAN.G223.2 Capsicum annuum HOM05D002261 ORTHO05D002334 8.9e-06 54.7 166 28.9
Mapoly0109s0044 Marchantia polymorpha HOM05D000824 ORTHO05D003555 8.9e-06 54.7 185 24.3
Nitab4.5_0000015g0360 Nicotiana tabacum HOM05D002261 ORTHO05D002334 8.9e-06 54.7 138 29.7


User provided reference genes

Program Settings