Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G352.57 Capsicum annuum HOM05D002261 ORTHO05D002334 6.2e-97 357.5 180 100.0
CAN.G352.58 Capsicum annuum HOM05D002261 ORTHO05D002334 1.6e-81 306.2 188 86.7
PGSC0003DMG402010367 Solanum tuberosum HOM05D002261 ORTHO05D002334 5.7e-42 174.9 172 52.9
PGSC0003DMG400029822 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.2e-41 172.9 172 52.9
Sopen09g021920 Solanum pennellii HOM05D002261 ORTHO05D002334 1.6e-39 166.8 174 52.9
PGSC0003DMG401021841 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.7e-39 166.0 172 51.2
Nitab4.5_0001372g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.2e-37 158.7 176 49.4
PGSC0003DMG400033169 Solanum tuberosum HOM05D002261 ORTHO05D002334 6.3e-33 144.8 146 51.4
PGSC0003DMG400020377 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.1e-32 144.1 145 53.1
PGSC0003DMG400021867 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.7e-31 139.4 161 50.3
Solyc05g017797.1 Solanum lycopersicum HOM05D002261 ORTHO05D002334 8.6e-30 134.4 146 50.7
Solyc01g066616.1 Solanum lycopersicum HOM05D002261 ORTHO05D002334 3.6e-28 129.0 137 50.4
Sopen04g013910 Solanum pennellii HOM05D002261 ORTHO05D002334 3.4e-26 122.5 181 44.2
PGSC0003DMG400017712 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.4e-24 117.1 175 41.1
Solyc09g015140.2 Solanum lycopersicum HOM05D002261 ORTHO05D002334 4.1e-24 115.5 120 53.3
PGSC0003DMG400029865 Solanum tuberosum HOM05D002261 ORTHO05D002334 4.5e-23 112.1 118 55.1
Cc10_g10270 Coffea canephora HOM05D017605 ORTHO05D009014 1.2e-20 104.0 177 33.3
Peaxi162Scf00519g00002 Petunia axillaris HOM05D002261 ORTHO05D002334 4.7e-20 102.1 177 37.3
Nitab4.5_0004971g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.2e-18 97.4 176 31.8
Nitab4.5_0011520g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.0e-18 96.7 77 59.7
CAN.G765.17 Capsicum annuum HOM05D002261 ORTHO05D002334 4.4e-18 95.5 176 35.2
Nitab4.5_0000250g0180 Nicotiana tabacum HOM05D002261 ORTHO05D002334 7.5e-18 94.7 120 50.0
Nitab4.5_0001280g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 9.8e-18 94.4 169 36.1
Nitab4.5_0003673g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.7e-15 86.3 175 31.4
PGSC0003DMG400023096 Solanum tuberosum HOM05D002261 ORTHO05D002334 7.8e-15 84.7 84 51.2
Nitab4.5_0028843g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.7e-14 83.6 156 35.3
Peaxi162Scf00131g00001 Petunia axillaris HOM05D002261 ORTHO05D002334 1.7e-14 83.6 150 38.7
Sopen03g007880 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-14 83.6 100 49.0
Nitab4.5_0003349g0050 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.9e-14 82.4 183 35.0
Solyc12g042110.3 Solanum lycopersicum HOM05D002261 ORTHO05D002334 5.0e-14 82.0 114 40.4
Sopen12g021190 Solanum pennellii HOM05D002261 ORTHO05D002334 2.5e-13 79.7 54 61.1
PGSC0003DMG400041066 Solanum tuberosum HOM05D002261 ORTHO05D002334 9.5e-13 77.8 109 38.5
Sopen10g017900 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-12 77.4 174 33.3
Nitab4.5_0002141g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.8e-12 76.3 168 33.3
Sopen10g004570 Solanum pennellii HOM05D002261 ORTHO05D002334 1.4e-11 73.9 165 31.5
PGSC0003DMG400033635 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.8e-11 73.6 70 54.3
Atru.chr8.1160 Acer truncatum HOM05D006612 ORTHO05D010384 2.3e-11 73.2 179 29.6
Solyc08g062250.3 Solanum lycopersicum HOM05D002538 ORTHO05D002334 2.3e-11 73.2 76 51.3
PGSC0003DMG400030801 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.3e-11 73.2 70 54.3
Peaxi162Scf00752g00055 Petunia axillaris HOM05D002261 ORTHO05D002334 3.1e-11 72.8 77 46.8
Peaxi162Scf00752g00068 Petunia axillaris HOM05D002261 ORTHO05D002334 3.1e-11 72.8 77 46.8
TAR369G0863 Trochodendron aralioides HOM05D000674 ORTHO05D001490 3.1e-11 72.8 174 29.9
Peaxi162Scf00158g00318 Petunia axillaris HOM05D002261 ORTHO05D002334 4.0e-11 72.4 179 33.5
Nitab4.5_0012917g0020 Nicotiana tabacum HOM05D002261 ORTHO05D002334 6.8e-11 71.6 160 33.1
CAN.G1003.1 Capsicum annuum HOM05D002261 ORTHO05D002334 8.9e-11 71.2 68 67.6
Dinv10520 Davidia involucrata HOM05D000824 ORTHO05D010384 2.0e-10 70.1 180 27.8
CANSAT01G2695 Cannabis sativa HOM05D008860 ORTHO05D010384 2.6e-10 69.7 173 26.6
Nitab4.5_0000091g0370 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.6e-10 69.7 158 34.2
Nitab4.5_0007046g0020 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.6e-10 69.7 158 32.3
Solyc01g066612.1 Solanum lycopersicum HOM05D002261 ORTHO05D002334 2.6e-10 69.7 48 68.8
CiPaw.15G057000 Carya illinoinensis HOM05D009267 ORTHO05D010384 4.4e-10 68.9 175 28.6
CiPaw.09G042900 Carya illinoinensis HOM05D009267 ORTHO05D010384 5.8e-10 68.6 175 28.6
Solyc02g038640.3 Solanum lycopersicum HOM05D002261 ORTHO05D002334 9.8e-10 67.8 65 50.8
CiPaw.01G012000 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.7e-09 67.0 178 27.0
CiPaw.01G054700 Carya illinoinensis HOM05D009267 ORTHO05D010384 1.7e-09 67.0 175 28.0
CiPaw.15G116600 Carya illinoinensis HOM05D000096 ORTHO05D010384 2.2e-09 66.6 173 27.2
CANSAT80G1395 Cannabis sativa HOM05D008860 ORTHO05D010619 3.7e-09 65.9 180 28.3
CiPaw.15G013500 Carya illinoinensis HOM05D009267 ORTHO05D010384 3.7e-09 65.9 174 27.0
Nitab4.5_0000600g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.7e-09 65.9 165 30.3
Nitab4.5_0000570g0170 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.9e-09 65.5 182 30.2
Nitab4.5_0014440g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 6.4e-09 65.1 55 56.4
Nitab4.5_0002942g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.1e-08 64.3 79 41.8
Nitab4.5_0005642g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.1e-08 64.3 206 28.2
Sopen09g026580 Solanum pennellii HOM05D002538 ORTHO05D003162 1.4e-08 63.9 72 50.0
Peaxi162Scf00620g00218 Petunia axillaris HOM05D002261 ORTHO05D002334 2.4e-08 63.2 46 58.7
Nitab4.5_0011589g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.2e-08 62.8 180 31.1
Nitab4.5_0009868g0050 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.1e-08 62.4 156 28.2
Dinv06234 Davidia involucrata HOM05D006612 ORTHO05D010384 7.0e-08 61.6 176 27.3
Dinv08250 Davidia involucrata HOM05D000824 ORTHO05D010384 7.0e-08 61.6 174 24.7
Oeu027742.1 Olea europaea HOM05D008860 ORTHO05D010619 7.0e-08 61.6 176 26.7
Peaxi162Scf00565g00829 Petunia axillaris HOM05D002261 ORTHO05D002334 7.0e-08 61.6 175 26.9
Dinv30925 Davidia involucrata HOM05D000824 ORTHO05D010384 1.2e-07 60.8 176 26.1
Dinv41987 Davidia involucrata HOM05D000824 ORTHO05D010384 1.2e-07 60.8 176 26.1
Rhsim08G0049800 Rhododendron simsii HOM05D023805 ORTHO05D010384 1.2e-07 60.8 176 28.4
CiPaw.07G195700 Carya illinoinensis HOM05D009267 ORTHO05D010384 1.6e-07 60.5 173 25.4
Dinv19531 Davidia involucrata HOM05D000824 ORTHO05D010384 1.6e-07 60.5 178 27.0
Dinv26739 Davidia involucrata HOM05D000824 ORTHO05D010384 1.6e-07 60.5 164 27.4
Nitab4.5_0003285g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.6e-07 60.5 115 33.9
Nitab4.5_0011868g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.5e-07 59.3 196 24.5
Sopen12g016550 Solanum pennellii HOM05D002261 ORTHO05D002334 3.5e-07 59.3 126 38.9
Cc07_g18580 Coffea canephora HOM05D006612 ORTHO05D009014 4.6e-07 58.9 172 27.9
Nitab4.5_0009848g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.6e-07 58.9 99 37.4
Nitab4.5_0001899g0050 Nicotiana tabacum HOM05D002261 ORTHO05D002334 7.8e-07 58.2 92 39.1
Peaxi162Scf00224g00009 Petunia axillaris HOM05D002261 ORTHO05D002334 7.8e-07 58.2 110 36.4
Mapoly0109s0044 Marchantia polymorpha HOM05D000824 ORTHO05D003555 1.3e-06 57.4 178 27.5
Sopen06g019020 Solanum pennellii HOM05D002261 ORTHO05D002334 1.3e-06 57.4 159 28.9
PGSC0003DMG401008657 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.7e-06 57.0 150 28.7
CANSAT01G2441 Cannabis sativa HOM05D009267 ORTHO05D010384 2.3e-06 56.6 175 25.7
Sopen09g011030 Solanum pennellii HOM05D002261 ORTHO05D002334 2.3e-06 56.6 127 31.5
Sopen04g022620 Solanum pennellii HOM05D002261 ORTHO05D002334 3.0e-06 56.2 127 32.3
PGSC0003DMG400001258 Solanum tuberosum HOM05D002261 ORTHO05D002334 3.0e-06 56.2 61 45.9
Dinv38786 Davidia involucrata HOM05D006409 ORTHO05D008250 3.9e-06 55.8 176 25.6
Nitab4.5_0002588g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.9e-06 55.8 180 28.9
Nitab4.5_0007866g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.9e-06 55.8 77 35.1
CANSAT35G0072 Cannabis sativa HOM05D006612 ORTHO05D010384 6.6e-06 55.1 176 26.7
Peaxi162Scf00020g01022 Petunia axillaris HOM05D002261 ORTHO05D002334 6.6e-06 55.1 119 36.1


User provided reference genes

Program Settings