Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G350.31 Capsicum annuum HOM05D002009 ORTHO05D114977 2.9e-63 245.0 118 100.0
CAN.G1034.31 Capsicum annuum HOM05D002009 ORTHO05D006831 9.6e-22 107.1 57 91.2
Sopen01g042770 Solanum pennellii HOM05D002009 ORTHO05D006831 5.8e-19 97.8 63 74.6
Solyc01g099220.3 Solanum lycopersicum HOM05D002009 ORTHO05D006831 9.9e-19 97.1 63 74.6
Peaxi162Scf00037g00637 Petunia axillaris HOM05D002009 ORTHO05D006831 4.2e-17 91.7 52 80.8
MSTRG.27991 Avicennia marina HOM05D002009 ORTHO05D006831 2.0e-11 72.8 62 53.2
Oeu002661.1 Olea europaea HOM05D002009 ORTHO05D006831 2.9e-10 68.9 60 51.7
Lju1040C0G1 Lonicera japonica HOM05D002009 ORTHO05D006831 3.2e-09 65.5 60 53.3
Thecc.05G301300 Theobroma cacao HOM05D002009 ORTHO05D006831 4.2e-09 65.1 56 50.0
Potri.013G022200 Populus trichocarpa HOM05D002009 ORTHO05D006831 9.3e-09 63.9 60 46.7
TWI36G1702 Tripterygium wilfordii HOM05D002009 ORTHO05D006831 9.3e-09 63.9 67 43.3
Lj9C89G5 Lonicera japonica HOM05D002009 ORTHO05D006831 1.2e-08 63.5 60 51.7
Manes.09G167800 Manihot esculenta HOM05D002009 ORTHO05D006831 1.2e-08 63.5 49 59.2
CSS0006817 Camellia sinensis var. sinensis HOM05D002009 ORTHO05D006831 4.6e-08 61.6 60 51.7
CSS0012384 Camellia sinensis var. sinensis HOM05D002009 ORTHO05D006831 4.6e-08 61.6 60 51.7
CANSAT54G3017 Cannabis sativa HOM05D002009 ORTHO05D006831 7.9e-08 60.8 58 48.3
Dinv40301 Davidia involucrata HOM05D002009 ORTHO05D006831 7.9e-08 60.8 56 48.2
PSO210G3028 Papaver somniferum HOM05D002009 ORTHO05D006831 7.9e-08 60.8 69 46.4
GSVIVG01000087001 Vitis vinifera HOM05D002009 ORTHO05D006831 7.9e-08 60.8 56 51.8
Nn3g21358 Nelumbo nucifera HOM05D002009 ORTHO05D006831 1.3e-07 60.1 52 55.8
Sabra13G0024400 Salix brachista HOM05D002009 ORTHO05D006831 1.8e-07 59.7 47 51.1
Cc02_g33310 Coffea canephora HOM05D002009 ORTHO05D006831 2.3e-07 59.3 57 47.4
DCAR_001814 Daucus carota HOM05D002009 ORTHO05D006831 3.9e-07 58.5 60 48.3
vmacro04986 Vaccinium macrocarpon HOM05D002009 ORTHO05D006831 5.1e-07 58.2 56 48.2
Prupe.6G324000 Prunus persica HOM05D002009 ORTHO05D006831 8.7e-07 57.4 71 40.8
Gohir.A08G210100 Gossypium hirsutum HOM05D002009 ORTHO05D006831 1.1e-06 57.0 56 44.6
QL03p054350 Quercus lobata HOM05D003219 ORTHO05D005190 1.5e-06 56.6 67 41.8
Actinidia23644 Actinidia chinensis HOM05D002009 ORTHO05D006831 2.5e-06 55.8 56 50.0
Gorai.004G241000 Gossypium raimondii HOM05D002009 ORTHO05D006831 2.5e-06 55.8 47 53.2
ECA236G3568 Erigeron canadensis HOM05D002009 ORTHO05D006831 3.3e-06 55.5 56 44.6
MD12G1217900 Malus domestica HOM05D002009 ORTHO05D006831 3.3e-06 55.5 71 39.4
QL03p007353 Quercus lobata HOM05D002009 ORTHO05D006831 3.3e-06 55.5 67 40.3
QL03p007751 Quercus lobata HOM05D002009 ORTHO05D006831 3.3e-06 55.5 67 40.3
Atru.chr2.372 Acer truncatum HOM05D002009 ORTHO05D006831 4.3e-06 55.1 71 43.7
TAR633G0909 Trochodendron aralioides HOM05D002009 ORTHO05D006831 7.4e-06 54.3 56 46.4
RcHm_v2.0_Chr3g0455131 Rosa chinensis HOM05D002009 ORTHO05D006831 9.6e-06 53.9 60 45.0


User provided reference genes

Program Settings