Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G344.5 Capsicum annuum HOM05D000208 ORTHO05D022181 2.3e-85 318.9 166 100.0
Solyc03g122340.3 Solanum lycopersicum HOM05D000208 ORTHO05D000130 1.8e-18 96.7 78 71.8
CAN.G862.55 Capsicum annuum HOM05D000208 ORTHO05D000130 3.1e-18 95.9 78 71.8
Sopen03g041110 Solanum pennellii HOM05D000208 ORTHO05D000130 3.1e-18 95.9 78 71.8
PGSC0003DMG400022894 Solanum tuberosum HOM05D000208 ORTHO05D000130 9.0e-18 94.4 78 70.5
Nitab4.5_0002898g0030 Nicotiana tabacum HOM05D000208 ORTHO05D000130 2.0e-17 93.2 104 57.7
Peaxi162Scf00038g02025 Petunia axillaris HOM05D000208 ORTHO05D000130 4.5e-17 92.0 78 69.2
Nitab4.5_0006391g0020 Nicotiana tabacum HOM05D000208 ORTHO05D000130 1.7e-16 90.1 78 67.9
Dinv20424 Davidia involucrata HOM05D000208 ORTHO05D000130 1.8e-13 80.1 79 59.5
CAN.G534.2 Capsicum annuum HOM05D000208 ORTHO05D022181 2.3e-13 79.7 77 61.0
CAN.G534.24 Capsicum annuum HOM05D000208 ORTHO05D022181 2.3e-13 79.7 77 61.0
Dinv37861 Davidia involucrata HOM05D000208 ORTHO05D000130 1.5e-12 77.0 105 45.7
MSTRG.22544 Avicennia marina HOM05D000208 ORTHO05D000130 5.7e-12 75.1 75 57.3
Actinidia26023 Actinidia chinensis HOM05D000208 ORTHO05D000130 1.3e-11 73.9 68 57.4
Lj9A533T76 Lonicera japonica HOM05D000208 ORTHO05D000130 1.3e-11 73.9 75 56.0
Cc00_g27370 Coffea canephora HOM05D000208 ORTHO05D022181 1.7e-11 73.6 96 50.0
TAR624G0057 Trochodendron aralioides HOM05D000208 ORTHO05D000130 2.2e-11 73.2 85 55.3
Eucgr.J02807 Eucalyptus grandis HOM05D000208 ORTHO05D000130 2.8e-11 72.8 66 54.5
MELO3C024348.2 Cucumis melo HOM05D000208 ORTHO05D000130 3.7e-11 72.4 68 61.8
Prupe.3G039200 Prunus persica HOM05D000208 ORTHO05D000130 4.8e-11 72.0 79 57.0
Rhsim12G0210300 Rhododendron simsii HOM05D000208 ORTHO05D000130 4.8e-11 72.0 89 49.4
Migut.I01086 Erythranthe guttata HOM05D000208 ORTHO05D000130 1.1e-10 70.9 79 55.7
Thecc.06G121800 Theobroma cacao HOM05D000208 ORTHO05D000130 1.1e-10 70.9 111 46.8
Oeu011095.1 Olea europaea HOM05D000208 ORTHO05D000130 1.4e-10 70.5 71 56.3
DCAR_016115 Daucus carota HOM05D000208 ORTHO05D000130 1.8e-10 70.1 110 44.5
CsaV3_7G034390 Cucumis sativus L. HOM05D000208 ORTHO05D000130 2.4e-10 69.7 68 60.3
Aqoxy7G04077 Aquilegia oxysepala HOM05D000208 ORTHO05D000130 3.1e-10 69.3 106 43.4
Duzib192G0847 Durio zibethinus HOM05D000208 ORTHO05D000130 3.1e-10 69.3 78 57.7
COL.COLO4_30742 Corchorus olitorius HOM05D000208 ORTHO05D000130 4.1e-10 68.9 114 46.5
Hma1.2p1_0686F.1_g203361 Hydrangea macrophylla HOM05D000208 ORTHO05D000130 4.1e-10 68.9 75 54.7
RcHm_v2.0_Chr2g0145961 Rosa chinensis HOM05D000208 ORTHO05D000130 4.1e-10 68.9 75 54.7
MD09G1180900 Malus domestica HOM05D000208 ORTHO05D000130 6.9e-10 68.2 74 52.7
Nn8g38625 Nelumbo nucifera HOM05D000208 ORTHO05D000130 9.1e-10 67.8 77 55.8
SGA_v2.0_scaffold122G33344 Striga asiatica HOM05D000208 ORTHO05D000130 9.1e-10 67.8 58 60.3
CARHR018010 Cardamine hirsuta HOM05D000208 ORTHO05D000130 1.2e-09 67.4 95 44.2
Cc05_g01710 Coffea canephora HOM05D000208 ORTHO05D022181 1.2e-09 67.4 96 45.8
DCAR_026417 Daucus carota HOM05D000208 ORTHO05D000130 1.2e-09 67.4 76 43.4
ClCG09G001030 Citrullus lanatus HOM05D000208 ORTHO05D000130 1.5e-09 67.0 68 60.3
Nn6g35701 Nelumbo nucifera HOM05D000208 ORTHO05D000130 1.5e-09 67.0 75 52.0
QL05p004060 Quercus lobata HOM05D000208 ORTHO05D000130 1.5e-09 67.0 110 43.6
Sp1g15560 Schrenkiella parvula HOM05D000208 ORTHO05D000130 1.5e-09 67.0 95 44.2
Carub.0002s1938 Capsella rubella HOM05D000208 ORTHO05D000130 2.6e-09 66.2 82 48.8
FvH4_6g34970 Fragaria vesca HOM05D000208 ORTHO05D000130 2.6e-09 66.2 106 42.5
FAN05G2841 Fragaria x ananassa HOM05D000208 ORTHO05D000130 2.6e-09 66.2 73 54.8
FAN14G4250 Fragaria x ananassa HOM05D000208 ORTHO05D000130 2.6e-09 66.2 75 52.0
FAN09G4165 Fragaria x ananassa HOM05D000208 ORTHO05D000130 3.4e-09 65.9 75 53.3
Potri.001G167700 Populus trichocarpa HOM05D000208 ORTHO05D000130 3.4e-09 65.9 75 53.3
Sabra03G0039000 Salix brachista HOM05D000208 ORTHO05D000130 4.5e-09 65.5 75 52.0
BcaC07g41421 Brassica carinata HOM05D000208 ORTHO05D000130 5.9e-09 65.1 95 44.2
C08p43870 Brassica napus HOM05D000208 ORTHO05D000130 5.9e-09 65.1 95 44.2
BolC8t51936H Brassica oleracea HOM05D000208 ORTHO05D000130 5.9e-09 65.1 95 44.2
CiPaw.01G217600 Carya illinoinensis HOM05D000208 ORTHO05D000130 5.9e-09 65.1 75 53.3
MBI19_g47928_MAGBIO Magnolia biondii HOM05D000208 ORTHO05D000130 5.9e-09 65.1 68 55.9
Manes.04G145800 Manihot esculenta HOM05D000208 ORTHO05D000130 5.9e-09 65.1 110 42.7
A09p60380 Brassica napus HOM05D000208 ORTHO05D000130 7.7e-09 64.7 95 43.2
BraA09t41410Z Brassica rapa HOM05D000208 ORTHO05D000130 7.7e-09 64.7 95 43.2
Oeu000403.1 Olea europaea HOM05D000208 ORTHO05D000130 7.7e-09 64.7 64 59.4
Sp5g27600 Schrenkiella parvula HOM05D000208 ORTHO05D000130 7.7e-09 64.7 70 52.9
AL1G29680 Arabidopsis lyrata HOM05D000208 ORTHO05D000130 1.0e-08 64.3 88 44.3
AT1G17420 Arabidopsis thaliana HOM05D000208 ORTHO05D000130 1.0e-08 64.3 88 44.3
CARHR065460 Cardamine hirsuta HOM05D000208 ORTHO05D000130 1.0e-08 64.3 55 61.8
TWI75G1543 Tripterygium wilfordii HOM05D000208 ORTHO05D000130 1.0e-08 64.3 71 59.2
BcaB05g24762 Brassica carinata HOM05D000208 ORTHO05D000130 1.3e-08 63.9 51 64.7
BcaB03g12999 Brassica carinata HOM05D000208 ORTHO05D000130 1.7e-08 63.5 95 43.2
Lalb_Chr04g0261111 Lupinus albus HOM05D000208 ORTHO05D000130 1.7e-08 63.5 81 50.6
MD17G1167100 Malus domestica HOM05D000208 ORTHO05D000130 1.7e-08 63.5 74 50.0
Cfa003524 Carpinus fangiana HOM05D000208 ORTHO05D000130 2.9e-08 62.8 81 51.9
Thhalv10018089m.g Eutrema salsugineum HOM05D000208 ORTHO05D000130 2.9e-08 62.8 119 41.2
Sabra01G0125800 Salix brachista HOM05D000208 ORTHO05D000130 2.9e-08 62.8 75 50.7
TWI79G1762 Tripterygium wilfordii HOM05D000208 ORTHO05D000130 2.9e-08 62.8 70 58.6
GSVIVG01016738001 Vitis vinifera HOM05D000208 ORTHO05D000130 2.9e-08 62.8 82 50.0
A02p18060 Brassica napus HOM05D000208 ORTHO05D000130 3.8e-08 62.4 75 50.7
A08p30900 Brassica napus HOM05D000208 ORTHO05D000130 3.8e-08 62.4 95 42.1
BraA08t35022Z Brassica rapa HOM05D000208 ORTHO05D000130 3.8e-08 62.4 95 42.1
Duzib235G1046 Durio zibethinus HOM05D000208 ORTHO05D000130 3.8e-08 62.4 80 52.5
Thhalv10006732m.g Eutrema salsugineum HOM05D000208 ORTHO05D000130 3.8e-08 62.4 95 41.1
QL05p004076 Quercus lobata HOM05D000208 ORTHO05D000130 3.8e-08 62.4 106 43.4
AL2G32210 Arabidopsis lyrata HOM05D000208 ORTHO05D000130 5.0e-08 62.0 51 62.7
BcaC03g15398 Brassica carinata HOM05D000208 ORTHO05D000130 5.0e-08 62.0 75 49.3
BcaC07g38858 Brassica carinata HOM05D000208 ORTHO05D000130 5.0e-08 62.0 95 42.1
C02p30090 Brassica napus HOM05D000208 ORTHO05D000130 5.0e-08 62.0 75 49.3
C08p17950 Brassica napus HOM05D000208 ORTHO05D000130 5.0e-08 62.0 95 42.1
BolC2t09058H Brassica oleracea HOM05D000208 ORTHO05D000130 5.0e-08 62.0 75 49.3
BolC8t49428H Brassica oleracea HOM05D000208 ORTHO05D000130 5.0e-08 62.0 95 42.1
BraA02t06853Z Brassica rapa HOM05D000208 ORTHO05D000130 6.5e-08 61.6 137 38.0
Haze_16042 Corylus avellana HOM05D000208 ORTHO05D000130 6.5e-08 61.6 68 52.9
AT1G72520 Arabidopsis thaliana HOM05D000208 ORTHO05D000130 8.5e-08 61.2 76 48.7
CANSAT56G3587 Cannabis sativa HOM05D000208 ORTHO05D000130 1.1e-07 60.8 72 51.4
Medtr8g020970 Medicago truncatula HOM05D000208 ORTHO05D000130 1.1e-07 60.8 91 48.4
Aa31LG4G2850 Aethionema arabicum HOM05D000208 ORTHO05D000130 1.4e-07 60.5 110 41.8
QL02p039588 Quercus lobata HOM05D007170 ORTHO05D009243 1.4e-07 60.5 140 32.9
Lsat_1_v5_gn_4_93560 Lactuca sativa HOM05D000208 ORTHO05D000130 1.9e-07 60.1 130 36.9
Atru.chr1.4003 Acer truncatum HOM05D000208 ORTHO05D000130 3.2e-07 59.3 111 38.7
Atru.chr1.4020 Acer truncatum HOM05D000208 ORTHO05D000130 3.2e-07 59.3 111 38.7
Glyma.07G039900 Glycine max HOM05D000208 ORTHO05D000130 3.2e-07 59.3 54 59.3
Glyma.16G008700 Glycine max HOM05D000208 ORTHO05D000130 3.2e-07 59.3 87 46.0
Gohir.A10G054600 Gossypium hirsutum HOM05D000208 ORTHO05D000130 3.2e-07 59.3 85 48.2
Gohir.D10G056600 Gossypium hirsutum HOM05D000208 ORTHO05D000130 3.2e-07 59.3 85 48.2
Gorai.011G060400 Gossypium raimondii HOM05D000208 ORTHO05D000130 3.2e-07 59.3 85 48.2
PSO135G0265 Papaver somniferum HOM05D000208 ORTHO05D000130 4.2e-07 58.9 94 42.6
Sed0006888 Sechium edule HOM05D000208 ORTHO05D000130 4.2e-07 58.9 79 44.3
vmacro22034 Vaccinium macrocarpon HOM05D000208 ORTHO05D000130 4.2e-07 58.9 125 44.8
VMungo0331G0225 Vigna mungo HOM05D000208 ORTHO05D000130 4.2e-07 58.9 54 59.3
PSO724G0434 Papaver somniferum HOM05D000208 ORTHO05D000130 5.5e-07 58.5 67 49.3
Psat4g168720 Pisum sativum HOM05D000208 ORTHO05D000130 5.5e-07 58.5 89 47.2
THA.LOC104814043 Tarenaya hassleriana HOM05D000208 ORTHO05D000130 7.2e-07 58.2 74 45.9
Lsat_1_v5_gn_1_38321 Lactuca sativa HOM05D000208 ORTHO05D000130 9.4e-07 57.8 74 51.4
TPR.G16748 Trifolium pratense HOM05D000208 ORTHO05D000130 9.4e-07 57.8 91 46.2
Carub.0001s1718 Capsella rubella HOM05D000208 ORTHO05D000130 1.2e-06 57.4 88 39.8
Phvul.010G128800 Phaseolus vulgaris HOM05D000208 ORTHO05D000130 1.2e-06 57.4 92 43.5
ECA232G0914 Erigeron canadensis HOM05D000208 ORTHO05D000130 1.6e-06 57.0 134 35.1
Ca_23392_v3 Cicer arietinum L. HOM05D000208 ORTHO05D000130 2.1e-06 56.6 97 45.4
Cpa.g.sc25.128 Carica papaya HOM05D000208 ORTHO05D000130 2.7e-06 56.2 82 47.6
Actinidia02882 Actinidia chinensis HOM05D000208 ORTHO05D000130 4.7e-06 55.5 47 66.0
arahy.Tifrunner.gnm1.ann1.TRRP7J Arachis hypogaea HOM05D000208 ORTHO05D000130 6.1e-06 55.1 54 55.6
Glyma.19G263300 Glycine max HOM05D000208 ORTHO05D000130 6.1e-06 55.1 88 47.7
Phvul.009G262900 Phaseolus vulgaris HOM05D000208 ORTHO05D000130 7.9e-06 54.7 82 47.6


User provided reference genes

Program Settings