Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G34.9 Capsicum annuum HOM05D005952 ORTHO05D007262 3.5e-195 684.9 372 100.0
Solyc12g035650.2 Solanum lycopersicum HOM05D005952 ORTHO05D007262 3.9e-162 575.1 393 83.7
Sopen12g015910 Solanum pennellii HOM05D005952 ORTHO05D007262 3.9e-162 575.1 393 83.7
Peaxi162Scf00518g00512 Petunia axillaris HOM05D005952 ORTHO05D007262 1.0e-146 523.9 369 81.0
Nitab4.5_0000492g0130 Nicotiana tabacum HOM05D005952 ORTHO05D007262 6.3e-144 514.6 373 82.6
Nitab4.5_0002026g0100 Nicotiana tabacum HOM05D005952 ORTHO05D007262 1.6e-139 500.0 373 80.4
Cc00_g13550 Coffea canephora HOM05D005952 ORTHO05D007262 7.9e-139 497.7 338 79.3
MSTRG.7992 Avicennia marina HOM05D005952 ORTHO05D007262 6.3e-136 488.0 371 76.3
Prupe.1G228700 Prunus persica HOM05D005952 ORTHO05D007262 1.1e-135 487.3 340 77.6
Gohir.A03G127000 Gossypium hirsutum HOM05D005952 ORTHO05D007262 7.0e-135 484.6 340 79.7
Gohir.D02G150400 Gossypium hirsutum HOM05D005952 ORTHO05D007262 1.2e-134 483.8 339 79.1
Gorai.005G168700 Gossypium raimondii HOM05D005952 ORTHO05D007262 3.8e-133 478.8 339 78.5
Manes.13G018200 Manihot esculenta HOM05D005952 ORTHO05D007262 1.1e-132 477.2 339 77.9
TWI75G1563 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 2.5e-132 476.1 337 77.2
Nn3g16502 Nelumbo nucifera HOM05D005952 ORTHO05D007262 3.2e-132 475.7 362 74.0
Dinv14825 Davidia involucrata HOM05D005952 ORTHO05D007262 7.2e-132 474.6 343 75.2
MD16G1117500 Malus domestica HOM05D005952 ORTHO05D007262 2.1e-131 473.0 331 77.3
CSS0022532 Camellia sinensis var. sinensis HOM05D005952 ORTHO05D007262 2.7e-131 472.6 373 74.8
CSS0029993 Camellia sinensis var. sinensis HOM05D005952 ORTHO05D007262 2.7e-131 472.6 373 74.8
QL03p053757 Quercus lobata HOM05D005952 ORTHO05D007262 4.7e-131 471.9 373 75.3
PGR102G2583 Punica granatum HOM05D005952 ORTHO05D007262 1.8e-130 469.9 329 76.0
TAR622G0739 Trochodendron aralioides HOM05D005952 ORTHO05D007262 4.0e-130 468.8 375 71.7
Oeu036880.1 Olea europaea HOM05D005952 ORTHO05D007262 2.6e-129 466.1 369 71.3
CiPaw.06G101100 Carya illinoinensis HOM05D005952 ORTHO05D007262 2.8e-128 462.6 343 75.2
Lj3A1066G68 Lonicera japonica HOM05D005952 ORTHO05D007262 2.8e-128 462.6 394 72.6
ClCG11G013770 Citrullus lanatus HOM05D005952 ORTHO05D007262 1.8e-127 459.9 342 74.6
SGA_v2.0_scaffold9G04762 Striga asiatica HOM05D005952 ORTHO05D007262 5.3e-127 458.4 404 68.8
arahy.Tifrunner.gnm1.ann1.19W7I6 Arachis hypogaea HOM05D005952 ORTHO05D007262 7.0e-127 458.0 401 69.6
Thecc.02G212400 Theobroma cacao HOM05D005952 ORTHO05D007262 7.0e-127 458.0 346 74.3
CANSAT01G2967 Cannabis sativa HOM05D005952 ORTHO05D007262 9.1e-127 457.6 347 73.2
CsaV3_5G030360 Cucumis sativus L. HOM05D005952 ORTHO05D007262 9.1e-127 457.6 342 74.0
HanXRQChr08g0207671 Helianthus annuus HOM05D005952 ORTHO05D007262 9.1e-127 457.6 335 74.9
Cfa009332 Carpinus fangiana HOM05D005952 ORTHO05D007262 1.6e-126 456.8 331 76.4
MELO3C011875.2 Cucumis melo HOM05D005952 ORTHO05D007262 1.6e-126 456.8 343 74.3
Duzib251G0036 Durio zibethinus HOM05D005952 ORTHO05D007262 1.0e-125 454.1 337 75.1
Cpa.g.sc43.12 Carica papaya HOM05D005952 ORTHO05D007262 5.0e-125 451.8 368 70.9
Eucgr.B03481 Eucalyptus grandis HOM05D005952 ORTHO05D007262 6.5e-125 451.4 311 77.2
COL.COLO4_20379 Corchorus olitorius HOM05D005952 ORTHO05D007262 1.5e-124 450.3 372 69.1
Aqoxy5G03416 Aquilegia oxysepala HOM05D005952 ORTHO05D007262 1.9e-124 449.9 385 67.3
Ciclev10031923m.g Citrus clementina HOM05D005952 ORTHO05D007262 2.5e-124 449.5 333 75.1
TWI36G0663 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 4.2e-124 448.7 271 84.9
VMungo1383G3287 Vigna mungo HOM05D005952 ORTHO05D007262 4.2e-124 448.7 395 69.6
Potri.010G059100 Populus trichocarpa HOM05D005952 ORTHO05D007262 5.5e-124 448.4 344 73.3
Migut.K00712 Erythranthe guttata HOM05D005952 ORTHO05D007262 7.2e-124 448.0 376 71.5
Lsat_1_v5_gn_8_149221 Lactuca sativa HOM05D005952 ORTHO05D007262 7.2e-124 448.0 338 74.3
Actinidia20698 Actinidia chinensis HOM05D005952 ORTHO05D007262 9.4e-124 447.6 311 76.8
Sabra10G0046500 Salix brachista HOM05D005952 ORTHO05D007262 2.1e-123 446.4 338 73.7
RcHm_v2.0_Chr4g0430621 Rosa chinensis HOM05D005952 ORTHO05D007262 1.2e-121 440.7 335 74.3
Atru.chr11.2304 Acer truncatum HOM05D005952 ORTHO05D007262 1.5e-121 440.3 333 72.7
C03p73530 Brassica napus HOM05D005952 ORTHO05D007262 5.7e-121 438.3 339 70.8
Sc04g0004640 Simmondsia chinensis HOM05D005952 ORTHO05D007262 9.8e-121 437.6 337 69.7
EL10Ac6g13481 Beta vulgaris HOM05D005952 ORTHO05D007262 1.3e-120 437.2 333 73.3
THA.LOC104825515 Tarenaya hassleriana HOM05D005952 ORTHO05D007262 5.4e-119 431.8 337 70.6
Lalb_Chr12g0206321 Lupinus albus HOM05D005952 ORTHO05D007262 9.1e-119 431.0 333 71.8
Potri.008G176100 Populus trichocarpa HOM05D005952 ORTHO05D007262 1.2e-118 430.6 382 71.5
GSVIVG01010442001 Vitis vinifera HOM05D005952 ORTHO05D007262 1.2e-118 430.6 262 85.5
FAN07G2604 Fragaria x ananassa HOM05D005952 ORTHO05D007262 2.7e-118 429.5 381 70.9
FAN24G3446 Fragaria x ananassa HOM05D005952 ORTHO05D007262 2.7e-118 429.5 381 70.9
MD13G1116800 Malus domestica HOM05D005952 ORTHO05D007262 2.7e-118 429.5 262 85.5
BcaC01g01637 Brassica carinata HOM05D005952 ORTHO05D007262 4.5e-118 428.7 344 70.1
AUR62024128 Chenopodium quinoa HOM05D005952 ORTHO05D007262 4.5e-118 428.7 331 71.9
Lj1g0012703 Lotus japonicus HOM05D005952 ORTHO05D007262 4.5e-118 428.7 386 64.2
Sed0028059 Sechium edule HOM05D005952 ORTHO05D007262 5.9e-118 428.3 318 73.3
BolC3t19647H Brassica oleracea HOM05D005952 ORTHO05D007262 1.3e-117 427.2 344 69.8
A08p26510 Brassica napus HOM05D005952 ORTHO05D007262 1.7e-117 426.8 342 70.2
MBI11_g07451_MAGBIO Magnolia biondii HOM05D005952 ORTHO05D007262 1.7e-117 426.8 362 66.9
Phvul.001G260500 Phaseolus vulgaris HOM05D005952 ORTHO05D007262 1.7e-117 426.8 395 66.8
BraA08t34603Z Brassica rapa HOM05D005952 ORTHO05D007262 2.2e-117 426.4 343 70.0
Ah.02g130720 Amaranthus hybridus HOM05D005952 ORTHO05D007262 5.0e-117 425.2 332 70.8
BcaB03g12064 Brassica carinata HOM05D005952 ORTHO05D007262 5.0e-117 425.2 337 69.4
CARHR026780 Cardamine hirsuta HOM05D005952 ORTHO05D007262 5.0e-117 425.2 339 69.9
Glyma.11G249200 Glycine max HOM05D005952 ORTHO05D007262 5.0e-117 425.2 372 66.9
FAN07G2304 Fragaria x ananassa HOM05D005952 ORTHO05D007262 8.5e-117 424.5 333 72.7
Sp1g23460 Schrenkiella parvula HOM05D005952 ORTHO05D007262 1.5e-116 423.7 339 69.3
Hund06080 Selenicereus undatus HOM05D005952 ORTHO05D007262 4.2e-116 422.2 405 64.2
FvH4_4g23970 Fragaria vesca HOM05D005952 ORTHO05D007262 5.5e-116 421.8 334 71.9
Haze_12392 Corylus avellana HOM05D005952 ORTHO05D007262 2.1e-115 419.9 353 68.8
AT1G24310 Arabidopsis thaliana HOM05D005952 ORTHO05D007262 6.1e-115 418.3 345 67.0
Psat5g094800 Pisum sativum HOM05D005952 ORTHO05D007262 1.0e-114 417.5 391 66.0
Glyma.18G008100 Glycine max HOM05D005952 ORTHO05D007262 2.3e-114 416.4 387 68.0
AL1G40610 Arabidopsis lyrata HOM05D005952 ORTHO05D007262 1.2e-113 414.1 348 66.1
Rhsim12G0102200 Rhododendron simsii HOM05D005952 ORTHO05D007262 2.0e-113 413.3 483 58.0
ECA233G5976 Erigeron canadensis HOM05D005952 ORTHO05D007262 3.4e-113 412.5 383 66.1
CDE02G4251 Ceratophyllum demersum HOM05D005952 ORTHO05D007262 5.7e-113 411.8 372 64.5
Medtr3g085590 Medicago truncatula HOM05D005952 ORTHO05D007262 2.2e-112 409.8 385 64.9
Sed0012291 Sechium edule HOM05D005952 ORTHO05D007262 2.2e-112 409.8 387 62.3
FAN03G3372 Fragaria x ananassa HOM05D005952 ORTHO05D007262 2.4e-111 406.4 391 67.8
Aa31LG7G9800 Aethionema arabicum HOM05D005952 ORTHO05D007262 3.1e-111 406.0 345 67.0
Carub.0001s2576 Capsella rubella HOM05D005952 ORTHO05D007262 7.0e-111 404.8 340 66.8
ATR0561G264 Amborella trichopoda HOM05D005952 ORTHO05D007262 1.2e-110 404.1 340 65.6
PSO063G3255 Papaver somniferum HOM05D005952 ORTHO05D007262 3.6e-107 392.5 384 61.5
arahy.Tifrunner.gnm1.ann1.2251QZ Arachis hypogaea HOM05D005952 ORTHO05D007262 1.4e-106 390.6 401 63.1
PSO782G2816 Papaver somniferum HOM05D005952 ORTHO05D007262 2.0e-105 386.7 336 67.3
FAN27G1928 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.6e-102 377.1 371 65.5
Ca_16474_v3 Cicer arietinum L. HOM05D005952 ORTHO05D007262 1.3e-101 374.0 241 79.7
AUR62005599 Chenopodium quinoa HOM05D005952 ORTHO05D007262 3.0e-101 372.9 299 69.9
DCAR_031192 Daucus carota HOM05D005952 ORTHO05D007262 1.9e-100 370.2 239 79.1
FAN21G1414 Fragaria x ananassa HOM05D005952 ORTHO05D007262 2.5e-100 369.8 371 65.2
Os07g0295400 Oryza sativa ssp. japonica HOM05D005952 ORTHO05D007262 1.6e-94 350.5 270 65.6
Zm00001eb305390 Zea mays HOM05D005952 ORTHO05D007262 2.0e-94 350.1 271 65.7
HPP92_023193 Vanilla planifolia HOM05D005952 ORTHO05D007262 7.8e-94 348.2 341 58.7
SalBow2G2019 Salvia bowleyana HOM05D005952 ORTHO05D007262 9.5e-92 341.3 391 57.5
Mapoly0010s0010 Marchantia polymorpha HOM05D005952 ORTHO05D007262 1.4e-90 337.4 382 52.6
FAN04G2616 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.3e-88 330.9 227 79.3
SEGI_29251 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 1.7e-88 330.5 266 63.9
SHI17953 Sapria himalayana HOM05D005952 ORTHO05D007262 8.3e-88 328.2 279 63.4
Pp3c10_15930 Physcomitrium patens HOM05D005952 ORTHO05D007262 1.4e-87 327.4 372 51.3
Pp3c10_15937 Physcomitrium patens HOM05D005952 ORTHO05D007262 1.4e-87 327.4 372 51.3
Thhalv10008300m.g Eutrema salsugineum HOM05D005952 ORTHO05D007262 1.0e-85 321.2 260 68.5
CDE06G2258 Ceratophyllum demersum HOM05D005952 ORTHO05D007262 1.6e-83 313.9 373 54.7
CBR_g21943 Chara braunii HOM05D005952 ORTHO05D007262 2.0e-81 307.0 329 51.4
AagrBONN_evm.TU.Sc2ySwM_362.1552 Anthoceros agrestis HOM05D005952 ORTHO05D007262 1.4e-79 300.8 265 57.4
CBR_g39502 Chara braunii HOM05D005952 ORTHO05D007262 2.7e-78 296.6 344 49.1
Actinidia09658 Actinidia chinensis HOM05D005952 ORTHO05D007262 1.7e-77 293.9 321 58.3
AL6G39900 Arabidopsis lyrata HOM05D005075 ORTHO05D007097 3.2e-71 273.1 258 60.5
FAN04G0683 Fragaria x ananassa HOM05D005952 ORTHO05D007262 6.0e-70 268.9 267 66.7
Hma1.2p1_0668F.1_g200020 Hydrangea macrophylla HOM05D005952 ORTHO05D007262 1.3e-69 267.7 168 83.9
TWI36G1659 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 1.9e-68 263.8 346 50.3
Pp3c14_14130 Physcomitrium patens HOM05D005952 ORTHO05D007262 5.1e-53 212.6 251 49.8
Hma1.2p1_0668F.1_g200040 Hydrangea macrophylla HOM05D005952 ORTHO05D007262 1.5e-49 201.1 229 56.3
FAN23G0106 Fragaria x ananassa HOM05D005952 ORTHO05D007262 3.9e-45 186.4 212 62.3
FAN04G0535 Fragaria x ananassa HOM05D005952 ORTHO05D007262 6.7e-29 132.5 112 70.5
HanXRQChr03g0071651 Helianthus annuus HOM05D005952 ORTHO05D007262 2.8e-27 127.1 93 68.8
SEGI_23869 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 3.7e-27 126.7 96 61.5
Migut.K01177 Erythranthe guttata HOM05D005952 ORTHO05D007262 2.6e-20 104.0 100 63.0
Cre12.g542950 Chlamydomonas reinhardtii HOM05D005952 ORTHO05D007262 7.0e-18 95.9 250 30.4
MCO04G375 Micromonas commoda HOM05D005952 ORTHO05D007262 1.2e-17 95.1 333 24.9
SEGI_30692 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 1.3e-16 91.7 113 40.7
Oeu029609.1 Olea europaea HOM05D005952 ORTHO05D007262 3.8e-16 90.1 62 67.7
BcaC03g16356 Brassica carinata HOM05D029489 ORTHO05D007262 2.7e-06 57.4 38 68.4


User provided reference genes

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