Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G337.40 Capsicum annuum HOM05D002496 ORTHO05D002787 1.9e-104 382.5 188 100.0
CAN.G2376.2 Capsicum annuum HOM05D002496 ORTHO05D002787 6.8e-46 188.0 195 57.4
CAN.G1783.6 Capsicum annuum HOM05D002496 ORTHO05D002787 5.8e-45 184.9 176 59.7
Solyc12g100360.1 Solanum lycopersicum HOM05D002496 ORTHO05D002787 2.9e-44 182.6 195 54.9
Nitab4.5_0000827g0130 Nicotiana tabacum HOM05D002496 ORTHO05D002787 3.7e-44 182.2 195 54.9
Sopen12g035030 Solanum pennellii HOM05D002496 ORTHO05D002787 3.7e-44 182.2 195 54.9
Peaxi162Scf00738g00312 Petunia axillaris HOM05D002496 ORTHO05D002787 7.0e-43 177.9 195 53.8
CAN.G2119.1 Capsicum annuum HOM05D002496 ORTHO05D002787 1.1e-40 170.6 209 51.2
CAN.G2026.4 Capsicum annuum HOM05D002496 ORTHO05D002787 4.7e-39 165.2 195 52.3
Oeu023952.2 Olea europaea HOM05D002496 ORTHO05D002787 4.7e-39 165.2 195 49.7
Oeu023700.1 Olea europaea HOM05D002496 ORTHO05D002787 5.2e-38 161.8 195 49.2
SalBow2G0058 Salvia bowleyana HOM05D002496 ORTHO05D002787 7.5e-37 157.9 195 47.2
Cfa009562 Carpinus fangiana HOM05D002496 ORTHO05D002787 2.9e-36 156.0 195 47.2
Dinv13473 Davidia involucrata HOM05D002496 ORTHO05D002787 2.9e-36 156.0 195 46.2
Lj2A763G36 Lonicera japonica HOM05D002496 ORTHO05D002787 2.9e-36 156.0 195 46.7
Potri.003G221100 Populus trichocarpa HOM05D002496 ORTHO05D002787 3.7e-36 155.6 195 46.7
Potri.001G003900 Populus trichocarpa HOM05D002496 ORTHO05D002787 4.9e-36 155.2 195 47.7
Haze_22941 Corylus avellana HOM05D002496 ORTHO05D002787 8.3e-36 154.5 195 46.7
Migut.D02566 Erythranthe guttata HOM05D002496 ORTHO05D002787 8.3e-36 154.5 195 46.7
Migut.D02589 Erythranthe guttata HOM05D002496 ORTHO05D002787 8.3e-36 154.5 195 46.7
SGA_v2.0_scaffold3G01729 Striga asiatica HOM05D002496 ORTHO05D002787 1.1e-35 154.1 195 46.7
QL01p003675 Quercus lobata HOM05D002496 ORTHO05D002787 1.9e-35 153.3 195 45.6
Sabra01G0002600 Salix brachista HOM05D002496 ORTHO05D002787 1.9e-35 153.3 195 47.7
Sabra03G0164600 Salix brachista HOM05D002496 ORTHO05D002787 1.9e-35 153.3 195 46.2
arahy.Tifrunner.gnm1.ann1.P751E4 Arachis hypogaea HOM05D002496 ORTHO05D002787 2.4e-35 152.9 195 44.6
CSS0046180 Camellia sinensis var. sinensis HOM05D002496 ORTHO05D002787 2.4e-35 152.9 195 46.2
Lalb_Chr13g0295581 Lupinus albus HOM05D002496 ORTHO05D002787 2.4e-35 152.9 196 44.4
HanXRQChr13g0405751 Helianthus annuus HOM05D002496 ORTHO05D002787 3.2e-35 152.5 195 46.2
arahy.Tifrunner.gnm1.ann1.3G7H7K Arachis hypogaea HOM05D002496 ORTHO05D002787 4.1e-35 152.1 195 44.6
FvH4_3g45741 Fragaria vesca HOM05D002496 ORTHO05D002787 5.4e-35 151.8 195 45.1
FAN16G0954 Fragaria x ananassa HOM05D002496 ORTHO05D002787 7.1e-35 151.4 195 45.1
MSTRG.20937 Avicennia marina HOM05D002496 ORTHO05D002787 9.2e-35 151.0 195 44.6
EL10Ac4g10386 Beta vulgaris HOM05D002496 ORTHO05D002787 9.2e-35 151.0 164 49.4
Lj4g0028195 Lotus japonicus HOM05D002496 ORTHO05D002787 9.2e-35 151.0 195 46.2
GSVIVG01025470001 Vitis vinifera HOM05D002496 ORTHO05D002787 1.2e-34 150.6 195 44.6
vmacro12599 Vaccinium macrocarpon HOM05D002496 ORTHO05D002787 2.1e-34 149.8 195 45.1
ECA233G0145 Erigeron canadensis HOM05D002496 ORTHO05D002787 2.7e-34 149.4 195 45.1
FAN25G0679 Fragaria x ananassa HOM05D002496 ORTHO05D002787 3.5e-34 149.1 195 44.6
Glyma.08G125500 Glycine max HOM05D002496 ORTHO05D002787 3.5e-34 149.1 195 43.6
Lsat_1_v5_gn_6_53141 Lactuca sativa HOM05D002496 ORTHO05D002787 3.5e-34 149.1 195 45.6
Rhsim01G0184300 Rhododendron simsii HOM05D002496 ORTHO05D002787 3.5e-34 149.1 195 45.1
RcHm_v2.0_Chr5g0083811 Rosa chinensis HOM05D002496 ORTHO05D002787 3.5e-34 149.1 195 44.6
DCAR_029934 Daucus carota HOM05D002496 ORTHO05D002787 4.6e-34 148.7 195 45.6
Actinidia39346 Actinidia chinensis HOM05D002496 ORTHO05D002787 7.8e-34 147.9 195 45.1
CiPaw.13G177100 Carya illinoinensis HOM05D002496 ORTHO05D002787 7.8e-34 147.9 195 44.6
HanXRQChr02g0057261 Helianthus annuus HOM05D002496 ORTHO05D002787 7.8e-34 147.9 195 44.1
Prupe.6G003300 Prunus persica HOM05D002496 ORTHO05D002787 7.8e-34 147.9 195 44.6
Dinv11477 Davidia involucrata HOM05D002496 ORTHO05D002787 1.3e-33 147.1 195 44.6
FAN04G0011 Fragaria x ananassa HOM05D002496 ORTHO05D002787 1.3e-33 147.1 195 44.6
VMungo0251G1507 Vigna mungo HOM05D002496 ORTHO05D002787 1.3e-33 147.1 195 43.6
Glyma.05G167200 Glycine max HOM05D002496 ORTHO05D002787 1.7e-33 146.7 195 43.1
MD03G1003600 Malus domestica HOM05D002496 ORTHO05D002787 1.7e-33 146.7 195 45.1
Phvul.002G247600 Phaseolus vulgaris HOM05D002496 ORTHO05D002787 1.7e-33 146.7 195 43.6
unitig_899.g15353 Utricularia gibba HOM05D002496 ORTHO05D002787 1.7e-33 146.7 197 44.2
Ca_17842_v3 Cicer arietinum L. HOM05D002496 ORTHO05D002787 2.3e-33 146.4 195 42.6
MD11G1003500 Malus domestica HOM05D002496 ORTHO05D002787 2.3e-33 146.4 195 44.1
Psat7g063600 Pisum sativum HOM05D002496 ORTHO05D002787 2.3e-33 146.4 195 43.1
COL.COLO4_05794 Corchorus olitorius HOM05D002496 ORTHO05D002787 3.0e-33 146.0 195 44.6
Medtr8g088520 Medicago truncatula HOM05D002496 ORTHO05D002787 3.9e-33 145.6 195 42.1
Gohir.A03G022300 Gossypium hirsutum HOM05D002496 ORTHO05D002787 6.6e-33 144.8 195 44.6
Gorai.003G153800 Gossypium raimondii HOM05D002496 ORTHO05D002787 6.6e-33 144.8 195 44.6
Eucgr.J01766 Eucalyptus grandis HOM05D002496 ORTHO05D002787 8.6e-33 144.4 195 44.1
Nn7g35861 Nelumbo nucifera HOM05D002496 ORTHO05D002787 1.5e-32 143.7 195 43.1
FvH4_3g45710 Fragaria vesca HOM05D002496 ORTHO05D002787 1.9e-32 143.3 195 43.1
FAN11G2291 Fragaria x ananassa HOM05D002496 ORTHO05D002787 1.9e-32 143.3 195 43.1
MBI01_g25638_MAGBIO Magnolia biondii HOM05D002496 ORTHO05D002787 1.9e-32 143.3 197 43.7
Thecc.09G199700 Theobroma cacao HOM05D002496 ORTHO05D002787 1.9e-32 143.3 195 44.6
Aa31LG10G1150 Aethionema arabicum HOM05D002496 ORTHO05D002787 2.5e-32 142.9 195 46.2
CANSAT11G2110 Cannabis sativa HOM05D002496 ORTHO05D002787 3.3e-32 142.5 198 42.9
TPR.G6803 Trifolium pratense HOM05D002496 ORTHO05D002787 3.3e-32 142.5 195 42.1
MELO3C015577.2 Cucumis melo HOM05D002496 ORTHO05D002787 4.3e-32 142.1 195 43.6
CsaV3_1G041650 Cucumis sativus L. HOM05D002496 ORTHO05D002787 4.3e-32 142.1 195 43.1
TAR369G0007 Trochodendron aralioides HOM05D002496 ORTHO05D002787 4.3e-32 142.1 195 42.6
Gohir.D03G146400 Gossypium hirsutum HOM05D002496 ORTHO05D002787 5.6e-32 141.7 195 44.1
Cpa.g.sc119.40 Carica papaya HOM05D002496 ORTHO05D002787 7.3e-32 141.4 195 44.6
ClCG03G014540 Citrullus lanatus HOM05D002496 ORTHO05D002787 7.3e-32 141.4 195 43.6
THA.LOC104822681 Tarenaya hassleriana HOM05D002496 ORTHO05D002787 7.3e-32 141.4 196 44.9
Aqoxy1G00475 Aquilegia oxysepala HOM05D002496 ORTHO05D002787 1.6e-31 140.2 195 43.1
Thhalv10011175m.g Eutrema salsugineum HOM05D002496 ORTHO05D002787 1.6e-31 140.2 195 45.1
Manes.03G087600 Manihot esculenta HOM05D002496 ORTHO05D002787 1.6e-31 140.2 195 45.6
Duzib168G0200 Durio zibethinus HOM05D002496 ORTHO05D002787 2.1e-31 139.8 195 44.1
Sp1g41030 Schrenkiella parvula HOM05D002496 ORTHO05D002787 2.8e-31 139.4 195 45.1
AT1G55350 Arabidopsis thaliana HOM05D002496 ORTHO05D002787 3.6e-31 139.0 195 45.1
Sed0022657 Sechium edule HOM05D002496 ORTHO05D002787 3.6e-31 139.0 195 42.1
Atru.chr3.2106 Acer truncatum HOM05D002496 ORTHO05D002787 4.7e-31 138.7 194 43.8
Carub.0001s4386 Capsella rubella HOM05D002496 ORTHO05D002787 8.1e-31 137.9 195 44.6
CARHR045010 Cardamine hirsuta HOM05D002496 ORTHO05D002787 8.1e-31 137.9 195 45.6
Cc01_g00070 Coffea canephora HOM05D002496 ORTHO05D002787 8.1e-31 137.9 183 47.0
PSO339G0705 Papaver somniferum HOM05D002496 ORTHO05D002787 8.1e-31 137.9 195 41.5
PSO384G1583 Papaver somniferum HOM05D002496 ORTHO05D002787 8.1e-31 137.9 195 41.5
AL1G63400 Arabidopsis lyrata HOM05D002496 ORTHO05D002787 1.8e-30 136.7 195 44.6
Sed0000966 Sechium edule HOM05D002496 ORTHO05D002787 1.8e-30 136.7 195 42.1
THA.LOC104810325 Tarenaya hassleriana HOM05D002496 ORTHO05D002787 1.8e-30 136.7 196 43.9
Hund21627 Selenicereus undatus HOM05D002496 ORTHO05D002787 3.1e-30 136.0 195 41.0
Ciclev10014012m.g Citrus clementina HOM05D002496 ORTHO05D002787 4.0e-30 135.6 194 42.3
TAR623G0218 Trochodendron aralioides HOM05D002496 ORTHO05D002787 4.0e-30 135.6 195 41.0
A06p00230 Brassica napus HOM05D002496 ORTHO05D002787 5.2e-30 135.2 195 44.6
BraA06t23239Z Brassica rapa HOM05D002496 ORTHO05D002787 5.2e-30 135.2 195 44.6
BolC6t36109H Brassica oleracea HOM05D002496 ORTHO05D002787 1.5e-29 133.7 195 43.6
BcaB04g16962 Brassica carinata HOM05D002496 ORTHO05D002787 2.0e-29 133.3 195 42.1
C06p10330 Brassica napus HOM05D002496 ORTHO05D002787 2.0e-29 133.3 195 43.1
BcaC08g43618 Brassica carinata HOM05D002496 ORTHO05D002787 4.4e-29 132.1 195 43.1
PGR119G1355 Punica granatum HOM05D002496 ORTHO05D002787 4.4e-29 132.1 197 42.1
HPP92_024699 Vanilla planifolia HOM05D002496 ORTHO05D002787 5.8e-29 131.7 195 42.6
AUR62040903 Chenopodium quinoa HOM05D002496 ORTHO05D002787 9.9e-29 131.0 195 40.0
Sc16g0012220 Simmondsia chinensis HOM05D002496 ORTHO05D002787 9.9e-29 131.0 195 42.6
ATR0827G153 Amborella trichopoda HOM05D002496 ORTHO05D002787 1.7e-28 130.2 195 40.0
Hma1.2p1_0241F.1_g100580 Hydrangea macrophylla HOM05D002496 ORTHO05D002787 4.9e-28 128.6 123 56.9
Ca_17843_v3 Cicer arietinum L. HOM05D002496 ORTHO05D002787 1.2e-26 124.0 108 58.3
Os02g0709400 Oryza sativa ssp. japonica HOM05D002496 ORTHO05D002787 1.3e-25 120.6 195 39.0
Zm00001eb014030 Zea mays HOM05D002496 ORTHO05D002787 3.0e-25 119.4 194 38.7
FvH4_3g45640 Fragaria vesca HOM05D002496 ORTHO05D002787 7.3e-24 114.8 89 66.3
CDE02G0627 Ceratophyllum demersum HOM05D002496 ORTHO05D002787 6.2e-23 111.7 196 36.2
SEGI_26512 Sequoiadendron giganteum HOM05D002496 ORTHO05D002787 1.1e-22 110.9 194 37.1
SMO332G0020 Selaginella moellendorffii HOM05D002496 ORTHO05D002787 6.9e-22 108.2 210 34.3
SMO334G0130 Selaginella moellendorffii HOM05D002496 ORTHO05D002787 6.9e-22 108.2 210 34.3
Mapoly0026s0090 Marchantia polymorpha HOM05D002496 ORTHO05D002787 1.2e-21 107.5 190 35.3
Pp3c17_17550 Physcomitrium patens HOM05D002496 ORTHO05D002787 2.0e-21 106.7 189 34.9
AagrBONN_evm.TU.Sc2ySwM_344.939 Anthoceros agrestis HOM05D002496 ORTHO05D002787 1.7e-20 103.6 196 34.7
Mapoly0026s0110 Marchantia polymorpha HOM05D002496 ORTHO05D002787 1.1e-19 100.9 192 33.9
PGSC0003DMG400004280 Solanum tuberosum HOM05D002496 ORTHO05D002787 1.1e-11 74.3 38 92.1
AUR62019163 Chenopodium quinoa HOM05D002496 ORTHO05D002787 2.4e-11 73.2 241 27.0
FAN11G3266 Fragaria x ananassa HOM05D002496 ORTHO05D002787 6.7e-09 65.1 123 37.4
HPP92_024698 Vanilla planifolia HOM05D002496 ORTHO05D002787 6.2e-07 58.5 40 65.0


User provided reference genes

Program Settings