Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G337.132 Capsicum annuum HOM05D006187 ORTHO05D007621 1.2e-120 436.4 209 100.0
PGSC0003DMG400022319 Solanum tuberosum HOM05D006187 ORTHO05D007621 1.9e-113 412.5 209 93.8
Peaxi162Scf00964g00021 Petunia axillaris HOM05D006187 ORTHO05D007621 4.2e-113 411.4 209 92.8
Solyc07g064590.3 Solanum lycopersicum HOM05D006187 ORTHO05D007621 5.5e-113 411.0 209 92.8
Sopen07g032780 Solanum pennellii HOM05D006187 ORTHO05D007621 2.7e-112 408.7 209 92.3
Oeu005532.1 Olea europaea HOM05D006187 ORTHO05D007621 1.4e-108 396.4 209 90.0
RhsimUnG0250600 Rhododendron simsii HOM05D006187 ORTHO05D007621 2.4e-108 395.6 209 88.0
DCAR_022562 Daucus carota HOM05D006187 ORTHO05D007621 5.3e-108 394.4 209 88.0
CSS0049447 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 7.7e-107 390.6 209 88.0
COL.COLO4_09662 Corchorus olitorius HOM05D006187 ORTHO05D007621 1.7e-106 389.4 209 88.0
MSTRG.26280 Avicennia marina HOM05D006187 ORTHO05D007621 3.8e-106 388.3 209 88.0
Dinv22262 Davidia involucrata HOM05D006187 ORTHO05D007621 3.8e-106 388.3 209 86.6
Thecc.07G036900 Theobroma cacao HOM05D006187 ORTHO05D007621 6.5e-106 387.5 209 88.5
ECA246G0646 Erigeron canadensis HOM05D006187 ORTHO05D007621 1.1e-105 386.7 209 87.1
Cc05_g13690 Coffea canephora HOM05D006187 ORTHO05D007621 3.2e-105 385.2 209 87.1
Nn1g03532 Nelumbo nucifera HOM05D006187 ORTHO05D007621 1.2e-104 383.3 209 86.1
Haze_09689 Corylus avellana HOM05D006187 ORTHO05D007621 1.6e-104 382.9 209 86.1
Manes.15G071900 Manihot esculenta HOM05D006187 ORTHO05D007621 2.1e-104 382.5 209 86.1
Ciclev10009486m.g Citrus clementina HOM05D006187 ORTHO05D007621 3.6e-104 381.7 209 86.6
Cfa020345 Carpinus fangiana HOM05D006187 ORTHO05D007621 4.7e-104 381.3 209 85.2
Potri.001G435500 Populus trichocarpa HOM05D006187 ORTHO05D007621 1.0e-103 380.2 209 86.1
Gohir.D01G066500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 1.4e-103 379.8 209 86.1
CSS0042680 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 5.2e-103 377.9 209 84.7
RcHm_v2.0_Chr5g0039431 Rosa chinensis HOM05D006187 ORTHO05D007621 5.2e-103 377.9 209 85.2
THA.LOC104816937 Tarenaya hassleriana HOM05D006187 ORTHO05D007621 5.2e-103 377.9 209 85.2
Sed0017183 Sechium edule HOM05D006187 ORTHO05D007621 8.8e-103 377.1 209 83.7
Dinv40753 Davidia involucrata HOM05D006187 ORTHO05D007621 1.5e-102 376.3 209 85.2
TAR626G1058 Trochodendron aralioides HOM05D006187 ORTHO05D007621 1.5e-102 376.3 209 85.2
Gorai.002G088500 Gossypium raimondii HOM05D006187 ORTHO05D007621 2.0e-102 375.9 209 85.2
Gohir.A01G079500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 2.6e-102 375.6 209 85.2
Lalb_Chr10g0106971 Lupinus albus HOM05D006187 ORTHO05D007621 2.6e-102 375.6 209 83.7
Prupe.4G212700 Prunus persica HOM05D006187 ORTHO05D007621 2.6e-102 375.6 209 84.7
Potri.011G139500 Populus trichocarpa HOM05D006187 ORTHO05D007621 4.4e-102 374.8 209 85.2
VMungo0647G0583 Vigna mungo HOM05D006187 ORTHO05D007621 4.4e-102 374.8 209 83.7
Duzib170G0579 Durio zibethinus HOM05D006187 ORTHO05D007621 1.3e-101 373.2 209 84.7
Aa31LG10G3660 Aethionema arabicum HOM05D006187 ORTHO05D007621 1.7e-101 372.9 209 85.6
FvH4_3g22670 Fragaria vesca HOM05D006187 ORTHO05D007621 1.7e-101 372.9 209 85.2
arahy.Tifrunner.gnm1.ann1.KHU2SV Arachis hypogaea HOM05D006187 ORTHO05D007621 2.2e-101 372.5 209 83.7
arahy.Tifrunner.gnm1.ann1.YIAG1Z Arachis hypogaea HOM05D006187 ORTHO05D007621 2.2e-101 372.5 209 83.7
Psat2g010920 Pisum sativum HOM05D006187 ORTHO05D007621 6.3e-101 370.9 209 82.3
PGR083G2749 Punica granatum HOM05D006187 ORTHO05D007621 6.3e-101 370.9 209 84.2
SalBow5G2755 Salvia bowleyana HOM05D006187 ORTHO05D007621 6.3e-101 370.9 225 80.4
Phvul.008G266900 Phaseolus vulgaris HOM05D006187 ORTHO05D007621 8.2e-101 370.5 209 82.8
PSO210G0259 Papaver somniferum HOM05D006187 ORTHO05D007621 1.1e-100 370.2 209 81.8
LjContig00272g0005891 Lotus japonicus HOM05D006187 ORTHO05D007621 1.4e-100 369.8 209 82.8
CiPaw.11G189300 Carya illinoinensis HOM05D006187 ORTHO05D007621 1.8e-100 369.4 209 86.1
MD11G1218600 Malus domestica HOM05D006187 ORTHO05D007621 1.8e-100 369.4 209 83.7
Zm00001eb207490 Zea mays HOM05D006187 ORTHO05D007621 1.8e-100 369.4 209 83.7
CiPaw.12G129700 Carya illinoinensis HOM05D006187 ORTHO05D007621 2.4e-100 369.0 209 83.3
CsaV3_7G021800 Cucumis sativus L. HOM05D006187 ORTHO05D007621 2.4e-100 369.0 209 82.8
TWI39G1048 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 2.4e-100 369.0 209 83.3
TPR.G1184 Trifolium pratense HOM05D006187 ORTHO05D007621 3.1e-100 368.6 209 81.8
AUR62020447 Chenopodium quinoa HOM05D006187 ORTHO05D007621 5.3e-100 367.9 209 83.3
GSVIVG01037647001 Vitis vinifera HOM05D006187 ORTHO05D007621 5.3e-100 367.9 209 83.3
PSO832G1277 Papaver somniferum HOM05D006187 ORTHO05D007621 9.1e-100 367.1 209 80.9
Aqoxy1G03401 Aquilegia oxysepala HOM05D006187 ORTHO05D007621 1.6e-99 366.3 209 83.3
AT1G50670 Arabidopsis thaliana HOM05D006187 ORTHO05D007621 2.0e-99 365.9 209 83.3
A06p02950 Brassica napus HOM05D006187 ORTHO05D007621 2.0e-99 365.9 207 83.1
Ca_06320_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 2.0e-99 365.9 209 82.8
Ca_30809_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 2.0e-99 365.9 209 82.8
Ah.06g186030 Amaranthus hybridus HOM05D006187 ORTHO05D007621 3.5e-99 365.2 209 80.4
CANSAT11G0252 Cannabis sativa HOM05D006187 ORTHO05D007621 3.5e-99 365.2 209 82.3
CARHR040720 Cardamine hirsuta HOM05D006187 ORTHO05D007621 3.5e-99 365.2 209 83.3
Migut.K00331 Erythranthe guttata HOM05D006187 ORTHO05D007621 4.5e-99 364.8 208 81.7
AL1G58340 Arabidopsis lyrata HOM05D006187 ORTHO05D007621 5.9e-99 364.4 209 82.8
unitig_746.g26546 Utricularia gibba HOM05D006187 ORTHO05D007621 5.9e-99 364.4 209 81.8
Oeu062696.2 Olea europaea HOM05D006187 ORTHO05D007621 7.7e-99 364.0 243 74.9
HPP92_016292 Vanilla planifolia HOM05D006187 ORTHO05D007621 7.7e-99 364.0 208 81.2
ATR0794G016 Amborella trichopoda HOM05D006187 ORTHO05D007621 2.2e-98 362.5 209 81.3
C06p05930 Brassica napus HOM05D006187 ORTHO05D007621 2.2e-98 362.5 207 82.6
AUR62015764 Chenopodium quinoa HOM05D006187 ORTHO05D007621 5.0e-98 361.3 209 81.3
FAN16G3112 Fragaria x ananassa HOM05D006187 ORTHO05D007621 5.0e-98 361.3 221 80.1
Eucgr.F00764 Eucalyptus grandis HOM05D006187 ORTHO05D007621 8.5e-98 360.5 209 81.3
Sp1g37520 Schrenkiella parvula HOM05D006187 ORTHO05D007621 8.5e-98 360.5 209 80.9
BcaB07g33507 Brassica carinata HOM05D006187 ORTHO05D007621 1.1e-97 360.1 207 82.1
BraA06t23501Z Brassica rapa HOM05D006187 ORTHO05D007621 1.5e-97 359.8 208 82.7
Actinidia35344 Actinidia chinensis HOM05D006187 ORTHO05D007621 2.5e-97 359.0 209 81.8
BcaC08g43245 Brassica carinata HOM05D006187 ORTHO05D007621 3.2e-97 358.6 207 82.1
Carub.0001s3971 Capsella rubella HOM05D006187 ORTHO05D007621 4.2e-97 358.2 209 81.3
Thhalv10011780m.g Eutrema salsugineum HOM05D006187 ORTHO05D007621 4.2e-97 358.2 209 82.3
SGA_v2.0_scaffold347G49550 Striga asiatica HOM05D006187 ORTHO05D007621 7.2e-97 357.5 209 80.9
EL10Ac4g07806 Beta vulgaris HOM05D006187 ORTHO05D007621 1.6e-96 356.3 209 79.9
FAN11G0395 Fragaria x ananassa HOM05D006187 ORTHO05D007621 1.6e-96 356.3 230 77.4
FAN25G1478 Fragaria x ananassa HOM05D006187 ORTHO05D007621 1.4e-95 353.2 230 76.5
HanXRQChr08g0233871 Helianthus annuus HOM05D006187 ORTHO05D007621 1.8e-95 352.8 187 89.3
Sc16g0006050 Simmondsia chinensis HOM05D006187 ORTHO05D007621 6.7e-95 350.9 209 80.4
FAN21G2137 Fragaria x ananassa HOM05D006187 ORTHO05D007621 8.8e-95 350.5 240 73.8
CDE05G0514 Ceratophyllum demersum HOM05D006187 ORTHO05D007621 1.5e-94 349.7 209 78.0
Lalb_Chr17g0348481 Lupinus albus HOM05D006187 ORTHO05D007621 2.2e-93 345.9 190 85.8
Lsat_1_v5_gn_5_3960 Lactuca sativa HOM05D006187 ORTHO05D007621 3.7e-93 345.1 191 86.4
HanXRQChr05g0159371 Helianthus annuus HOM05D006187 ORTHO05D007621 8.3e-93 344.0 187 87.7
Mapoly0105s0022 Marchantia polymorpha HOM05D006187 ORTHO05D007621 1.1e-92 343.6 209 75.6
SEGI_20110 Sequoiadendron giganteum HOM05D006187 ORTHO05D007621 2.0e-91 339.3 206 76.2
SMO201G0052 Selaginella moellendorffii HOM05D006187 ORTHO05D007621 7.7e-91 337.4 208 73.1
TWI38G1854 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 1.7e-90 336.3 187 83.4
MELO3C013167.2 Cucumis melo HOM05D006187 ORTHO05D007621 2.9e-90 335.5 189 82.0
ClCG09G010800 Citrullus lanatus HOM05D006187 ORTHO05D007621 3.8e-90 335.1 196 80.6
Medtr5g092720 Medicago truncatula HOM05D006187 ORTHO05D007621 5.0e-90 334.7 190 81.6
Pp3c26_11120 Physcomitrium patens HOM05D006187 ORTHO05D007621 1.1e-89 333.6 208 75.0
Glyma.02G291000 Glycine max HOM05D006187 ORTHO05D007621 2.1e-88 329.3 193 80.3
Nitab4.5_0011129g0020 Nicotiana tabacum HOM05D006187 ORTHO05D007621 2.1e-88 329.3 209 78.5
Sabra11G0125500 Salix brachista HOM05D006187 ORTHO05D007621 3.6e-88 328.6 288 60.1
Glyma.14G023700 Glycine max HOM05D006187 ORTHO05D007621 1.0e-87 327.0 185 82.7
AagrBONN_evm.TU.Sc2ySwM_344.4367 Anthoceros agrestis HOM05D004720 ORTHO05D007621 2.7e-83 312.4 205 70.2
vmacro09715 Vaccinium macrocarpon HOM05D006187 ORTHO05D007621 2.9e-82 308.9 165 86.1
QL08p010320 Quercus lobata HOM05D006187 ORTHO05D007621 9.8e-78 293.9 197 72.6
Lj1A872G52 Lonicera japonica HOM05D006187 ORTHO05D007621 2.2e-77 292.7 151 90.1
BolC6t35706H Brassica oleracea HOM05D006187 ORTHO05D007621 3.6e-72 275.4 165 78.8
SHI26611 Sapria himalayana HOM05D006187 ORTHO05D007621 3.7e-69 265.4 179 69.8
CBR_g54108 Chara braunii HOM05D006187 ORTHO05D007621 2.4e-68 262.7 167 73.7
Cre09.g409050 Chlamydomonas reinhardtii HOM05D006187 ORTHO05D007621 4.1e-68 261.9 204 62.7
Hma1.2p1_0673F.1_g201350 Hydrangea macrophylla HOM05D006187 ORTHO05D007621 9.2e-68 260.8 209 65.1
MCO07G461 Micromonas commoda HOM05D006187 ORTHO05D007621 4.3e-65 251.9 206 60.2
PSO675G5262 Papaver somniferum HOM05D006187 ORTHO05D007621 8.9e-63 244.2 210 56.2
HPP92_016312 Vanilla planifolia HOM05D006187 ORTHO05D007621 3.5e-59 232.3 135 80.7
PRCOL_00006206 Prasinoderma coloniale HOM05D006187 ORTHO05D007621 1.9e-52 209.9 206 51.5
Cpa.g.sc97.3 Carica papaya HOM05D006187 ORTHO05D007621 1.1e-49 200.7 151 64.9
PSO541G4439 Papaver somniferum HOM05D006187 ORTHO05D007621 2.8e-48 196.1 206 48.5
Haze_26155 Corylus avellana HOM05D006187 ORTHO05D007621 1.3e-42 177.2 207 40.6
Nitab4.5_0001913g0160 Nicotiana tabacum HOM05D006187 ORTHO05D007621 1.1e-39 167.5 84 95.2
MBI18_g14476_MAGBIO Magnolia biondii HOM05D006187 ORTHO05D007621 1.2e-38 164.1 149 58.4
Cre06.g274700 Chlamydomonas reinhardtii HOM05D006187 ORTHO05D007621 3.2e-36 156.0 135 52.6
Prupe.4G233700 Prunus persica HOM05D006187 ORTHO05D007621 1.0e-34 151.0 126 60.3
Os02g0164800 Oryza sativa ssp. japonica HOM05D006187 ORTHO05D007621 1.6e-32 143.7 84 81.0
PSO675G9324 Papaver somniferum HOM05D006187 ORTHO05D007621 2.1e-32 143.3 135 51.9
Cfa025770 Carpinus fangiana HOM05D006187 ORTHO05D007621 2.8e-32 142.9 228 37.3
HPP92_016311 Vanilla planifolia HOM05D006187 ORTHO05D007621 5.1e-26 122.1 74 75.7
AUR62015776 Chenopodium quinoa HOM05D006187 ORTHO05D007621 3.9e-18 95.9 83 59.0
QL08p010315 Quercus lobata HOM05D006187 ORTHO05D007621 9.6e-17 91.3 43 95.3


User provided reference genes

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