Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G331.1 Capsicum annuum HOM05D005573 ORTHO05D007161 5.3e-30 133.7 66 100.0
CAN.G653.3 Capsicum annuum HOM05D005573 ORTHO05D007161 3.4e-24 114.4 66 83.3
CAN.G1478.12 Capsicum annuum HOM05D005573 ORTHO05D007161 1.3e-23 112.5 64 84.4
CAN.G551.66 Capsicum annuum HOM05D005573 ORTHO05D007161 1.3e-23 112.5 64 84.4
CAN.G65.126 Capsicum annuum HOM05D005573 ORTHO05D007161 1.3e-23 112.5 64 84.4
Nn1g10181 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.7e-23 112.1 65 81.5
Nn1g10183 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.7e-23 112.1 65 81.5
Nn2g13212 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.7e-23 112.1 65 81.5
Nn423s46610 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.7e-23 112.1 65 81.5
Nn5g30925 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.7e-23 112.1 65 81.5
CAN.G1183.7 Capsicum annuum HOM05D005573 ORTHO05D007161 3.7e-23 110.9 64 84.4
CAN.G129.6 Capsicum annuum HOM05D005573 ORTHO05D007161 3.7e-23 110.9 64 82.8
PGSC0003DMG400024039 Solanum tuberosum HOM05D005573 ORTHO05D007161 1.1e-22 109.4 64 82.8
Nn6g33243 Nelumbo nucifera HOM05D005573 ORTHO05D007161 7.0e-22 106.7 65 76.9
Solyc09g015310.3 Solanum lycopersicum HOM05D005573 ORTHO05D007161 1.6e-21 105.5 63 77.8
Hma1.2p1_0248F.1_g102160 Hydrangea macrophylla HOM05D005573 ORTHO05D007161 2.7e-21 104.8 64 78.1
PSO548G0019 Papaver somniferum HOM05D005573 ORTHO05D007161 2.7e-21 104.8 65 76.9
CAN.G100.47 Capsicum annuum HOM05D005573 ORTHO05D007161 4.5e-21 104.0 64 78.1
PGR111G0074 Punica granatum HOM05D005573 ORTHO05D007161 4.5e-21 104.0 64 73.4
Eucgr.B02956 Eucalyptus grandis HOM05D005573 ORTHO05D007161 7.7e-21 103.2 64 75.0
arahy.Tifrunner.gnm1.ann1.DMW7HF Arachis hypogaea HOM05D005573 ORTHO05D007161 1.0e-20 102.8 64 76.6
Migut.D01426 Erythranthe guttata HOM05D005573 ORTHO05D007161 1.0e-20 102.8 64 76.6
Lsat_1_v5_gn_3_99201 Lactuca sativa HOM05D005573 ORTHO05D007161 1.0e-20 102.8 64 76.6
EL10As27g24246 Beta vulgaris HOM05D000216 ORTHO05D007161 1.3e-20 102.4 66 75.8
HanXRQChr02g0041471 Helianthus annuus HOM05D005573 ORTHO05D007161 2.3e-20 101.7 64 78.1
HanXRQChr02g0044961 Helianthus annuus HOM05D005573 ORTHO05D007161 2.3e-20 101.7 64 78.1
HanXRQChr07g0201021 Helianthus annuus HOM05D005573 ORTHO05D007161 2.3e-20 101.7 64 78.1
HanXRQChr08g0210291 Helianthus annuus HOM05D005573 ORTHO05D007161 2.3e-20 101.7 64 78.1
HanXRQChr10g0289201 Helianthus annuus HOM05D005573 ORTHO05D007161 2.3e-20 101.7 64 78.1
HanXRQChr11g0326731 Helianthus annuus HOM05D005573 ORTHO05D007161 2.3e-20 101.7 64 78.1
HanXRQChr13g0413641 Helianthus annuus HOM05D005573 ORTHO05D007161 2.3e-20 101.7 64 78.1
HanXRQChr13g0413711 Helianthus annuus HOM05D005573 ORTHO05D007161 2.3e-20 101.7 64 78.1
HanXRQChr13g0413781 Helianthus annuus HOM05D005573 ORTHO05D007161 2.3e-20 101.7 64 78.1
HanXRQChr13g0413861 Helianthus annuus HOM05D005573 ORTHO05D007161 2.3e-20 101.7 64 78.1
HanXRQChr13g0413931 Helianthus annuus HOM05D005573 ORTHO05D007161 2.3e-20 101.7 64 78.1
HanXRQCPg0579941 Helianthus annuus HOM05D005573 ORTHO05D007161 2.3e-20 101.7 64 78.1
Phvul.008G150500 Phaseolus vulgaris HOM05D005573 ORTHO05D007161 3.8e-20 100.9 64 70.3
TWI60G0396 Tripterygium wilfordii HOM05D005573 ORTHO05D007161 5.0e-20 100.5 64 75.0
Oeu012806.1 Olea europaea HOM05D005573 ORTHO05D007161 6.6e-20 100.1 62 77.4
Potri.013G163300 Populus trichocarpa HOM05D005573 ORTHO05D007161 2.5e-19 98.2 64 75.0
Lalb_Chr15g0080691 Lupinus albus HOM05D005573 ORTHO05D007161 4.2e-19 97.4 65 72.3
SalBow1G4134 Salvia bowleyana HOM05D005573 ORTHO05D007161 4.2e-19 97.4 66 69.7
AL2G20730 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 1.2e-18 95.9 64 71.9
AL2G21420 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 1.2e-18 95.9 64 71.9
ATCG00380 Arabidopsis thaliana HOM05D005573 ORTHO05D007161 1.2e-18 95.9 64 71.9
CARHR282030 Cardamine hirsuta HOM05D005573 ORTHO05D007161 1.2e-18 95.9 64 71.9
Thhalv10010766m.g Eutrema salsugineum HOM05D005573 ORTHO05D007161 1.2e-18 95.9 64 71.9
Gohir.A10G100366 Gossypium hirsutum HOM05D005573 ORTHO05D007161 1.2e-18 95.9 66 66.7
Gohir.D04G083800 Gossypium hirsutum HOM05D005573 ORTHO05D007161 1.6e-18 95.5 64 68.8
A06p23260 Brassica napus HOM05D005573 ORTHO05D007161 3.6e-18 94.4 64 70.3
BNapus_Darmor_BZH_scaffold_287p00070 Brassica napus HOM05D005573 ORTHO05D007161 3.6e-18 94.4 64 70.3
BolSC45t60866H Brassica oleracea HOM05D005573 ORTHO05D007161 3.6e-18 94.4 64 70.3
BolSC45t60946H Brassica oleracea HOM05D005573 ORTHO05D007161 3.6e-18 94.4 64 70.3
BolSC46t60993H Brassica oleracea HOM05D005573 ORTHO05D007161 3.6e-18 94.4 64 70.3
BolSC46t61042H Brassica oleracea HOM05D005573 ORTHO05D007161 3.6e-18 94.4 64 70.3
BolSC49t61189H Brassica oleracea HOM05D005573 ORTHO05D007161 3.6e-18 94.4 64 70.3
BraA06t25428Z Brassica rapa HOM05D005573 ORTHO05D007161 3.6e-18 94.4 64 70.3
BraSC140t45578Z Brassica rapa HOM05D005573 ORTHO05D007161 3.6e-18 94.4 64 70.3
BraSC151t45711Z Brassica rapa HOM05D005573 ORTHO05D007161 3.6e-18 94.4 64 70.3
BraSC25t45875Z Brassica rapa HOM05D005573 ORTHO05D007161 3.6e-18 94.4 64 70.3
Gohir.A07G163636 Gossypium hirsutum HOM05D005573 ORTHO05D007161 3.6e-18 94.4 64 68.8
Gohir.A08G157500 Gossypium hirsutum HOM05D005573 ORTHO05D007161 3.6e-18 94.4 64 68.8
Solyc09g015330.2 Solanum lycopersicum HOM05D005573 ORTHO05D007161 3.6e-18 94.4 63 73.0
Medtr4g051220 Medicago truncatula HOM05D005573 ORTHO05D007161 4.7e-18 94.0 64 71.9
Sed0002328 Sechium edule HOM05D005573 ORTHO05D007161 6.1e-18 93.6 64 70.3
Sed0008322 Sechium edule HOM05D005573 ORTHO05D007161 6.1e-18 93.6 64 70.3
LjContig00318g0014176 Lotus japonicus HOM05D005573 ORTHO05D007161 1.4e-17 92.4 64 68.8
Lj2P1237T91 Lonicera japonica HOM05D005573 ORTHO05D007161 3.0e-17 91.3 66 69.7
Lj2P1239T179 Lonicera japonica HOM05D005573 ORTHO05D007161 3.0e-17 91.3 66 69.7
DCAR_032486 Daucus carota HOM05D005573 ORTHO05D007161 2.0e-16 88.6 64 67.2
arahy.Tifrunner.gnm1.ann1.NAZW4C Arachis hypogaea HOM05D005573 ORTHO05D007161 1.8e-14 82.0 54 75.9
Solyc11g022620.1 Solanum lycopersicum HOM05D005573 ORTHO05D007161 2.4e-14 81.6 55 70.9
Zm00001eb039080 Zea mays HOM05D005573 ORTHO05D007161 2.0e-13 78.6 65 55.4
Zm00001eb039210 Zea mays HOM05D005573 ORTHO05D007161 2.0e-13 78.6 65 55.4
Zm00001eb435020 Zea mays HOM05D005573 ORTHO05D007161 2.0e-13 78.6 65 55.4
Zm00001eb435220 Zea mays HOM05D005573 ORTHO05D007161 2.0e-13 78.6 65 55.4
Zm00001eb435420 Zea mays HOM05D005573 ORTHO05D007161 2.0e-13 78.6 65 55.4
Zm00001eb435680 Zea mays HOM05D005573 ORTHO05D007161 2.0e-13 78.6 65 55.4
Zm00001eb438350 Zea mays HOM05D005573 ORTHO05D007161 2.0e-13 78.6 65 55.4
Zm00001eb440990 Zea mays HOM05D005573 ORTHO05D007161 2.0e-13 78.6 65 55.4
Nitab4.5_0000261g0250 Nicotiana tabacum HOM05D005573 ORTHO05D007161 1.3e-12 75.9 42 81.0
Lj4g0013543 Lotus japonicus HOM05D005573 ORTHO05D007161 1.7e-12 75.5 50 70.0
Glyma.01G153400 Glycine max HOM05D005573 ORTHO05D007161 2.3e-12 75.1 49 65.3
HanXRQChr13g0413681 Helianthus annuus HOM05D005573 ORTHO05D029920 5.6e-11 70.5 45 71.1
HanXRQChr13g0413751 Helianthus annuus HOM05D005573 ORTHO05D029920 5.6e-11 70.5 45 71.1
HanXRQChr13g0413831 Helianthus annuus HOM05D005573 ORTHO05D029920 5.6e-11 70.5 45 71.1
HanXRQChr13g0413901 Helianthus annuus HOM05D005573 ORTHO05D029920 5.6e-11 70.5 45 71.1
CAN.G63.13 Capsicum annuum HOM05D005573 ORTHO05D007161 2.1e-10 68.6 38 84.2
Oeu056456.1 Olea europaea HOM05D005573 ORTHO05D007161 8.0e-10 66.6 38 81.6
Nn055s41939 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.8e-09 65.5 37 81.1
Oeu041772.1 Olea europaea HOM05D005573 ORTHO05D007161 1.8e-09 65.5 60 60.0
Gohir.D09G179300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 1.3e-07 59.3 44 63.6
Gorai.006G201300 Gossypium raimondii HOM05D005573 ORTHO05D007161 1.3e-07 59.3 44 63.6
EL10As12g24021 Beta vulgaris HOM05D005573 ORTHO05D007161 1.7e-07 58.9 64 45.3
CDE08G0454 Ceratophyllum demersum HOM05D000219 ORTHO05D000226 2.9e-07 58.2 38 68.4
TAR625G0941 Trochodendron aralioides HOM05D005573 ORTHO05D007161 4.9e-07 57.4 31 83.9
SEGI_18745 Sequoiadendron giganteum HOM05D005573 ORTHO05D007161 3.2e-06 54.7 68 45.6


User provided reference genes

Program Settings