Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G321.18 Capsicum annuum HOM05D007606 ORTHO05D009600 6.3e-56 221.5 173 100.0
Sopen07g006820 Solanum pennellii HOM05D007606 ORTHO05D009600 4.2e-36 155.6 119 79.0
PGSC0003DMG400004088 Solanum tuberosum HOM05D007606 ORTHO05D009600 2.1e-35 153.3 119 78.2
Actinidia01312 Actinidia chinensis HOM05D007606 ORTHO05D009600 1.9e-28 130.2 115 67.0
Cpa.g.sc523.4 Carica papaya HOM05D007606 ORTHO05D009600 3.3e-28 129.4 98 78.6
Prupe.1G084400 Prunus persica HOM05D007606 ORTHO05D009600 5.6e-28 128.6 96 69.8
MELO3C017454.2 Cucumis melo HOM05D007606 ORTHO05D009600 1.2e-27 127.5 100 72.0
Nitab4.5_0000055g0310 Nicotiana tabacum HOM05D007606 ORTHO05D009600 1.2e-27 127.5 98 74.5
THA.LOC104813519 Tarenaya hassleriana HOM05D007606 ORTHO05D009600 1.2e-27 127.5 98 70.4
Sed0005573 Sechium edule HOM05D007606 ORTHO05D009600 1.6e-27 127.1 98 71.4
Migut.J01493 Erythranthe guttata HOM05D007606 ORTHO05D009600 2.8e-27 126.3 91 71.4
EL10Ac8g18293 Beta vulgaris HOM05D007606 ORTHO05D009600 3.6e-27 125.9 101 67.3
CiPaw.07G193100 Carya illinoinensis HOM05D007606 ORTHO05D009600 3.6e-27 125.9 98 76.5
CsaV3_1G031690 Cucumis sativus L. HOM05D007606 ORTHO05D009600 6.1e-27 125.2 98 70.4
Potri.018G091300 Populus trichocarpa HOM05D007606 ORTHO05D009600 1.4e-26 124.0 97 69.1
Sc18g0007510 Simmondsia chinensis HOM05D007606 ORTHO05D009600 1.4e-26 124.0 96 70.8
Sabra18G0078500 Salix brachista HOM05D007606 ORTHO05D009600 1.8e-26 123.6 94 69.1
SGA_v2.0_scaffold66G22417 Striga asiatica HOM05D007606 ORTHO05D009600 1.8e-26 123.6 66 92.4
AL8G33350 Arabidopsis lyrata HOM05D007606 ORTHO05D009600 2.3e-26 123.2 102 65.7
Ah.09g229950 Amaranthus hybridus HOM05D007606 ORTHO05D009600 3.0e-26 122.9 99 65.7
Cc06_g13140 Coffea canephora HOM05D007606 ORTHO05D009600 4.0e-26 122.5 65 92.3
MD16G1256400 Malus domestica HOM05D007606 ORTHO05D009600 4.0e-26 122.5 96 68.8
MD13G1252200 Malus domestica HOM05D007606 ORTHO05D009600 5.2e-26 122.1 101 65.3
FvH4_4g07990 Fragaria vesca HOM05D007606 ORTHO05D009600 6.8e-26 121.7 98 69.4
Glyma.17G062400 Glycine max HOM05D007606 ORTHO05D009600 6.8e-26 121.7 100 65.0
Manes.14G154600 Manihot esculenta HOM05D007606 ORTHO05D009600 6.8e-26 121.7 99 65.7
Oeu025687.1 Olea europaea HOM05D007606 ORTHO05D009600 1.5e-25 120.6 64 90.6
RcHm_v2.0_Chr4g0401721 Rosa chinensis HOM05D007606 ORTHO05D009600 1.5e-25 120.6 96 74.0
PSO063G2142 Papaver somniferum HOM05D007606 ORTHO05D009600 2.6e-25 119.8 96 65.6
Eucgr.C02351 Eucalyptus grandis HOM05D007606 ORTHO05D009600 3.4e-25 119.4 98 66.3
QL02p097943 Quercus lobata HOM05D007606 ORTHO05D009600 3.4e-25 119.4 103 68.0
Rhsim03G0264900 Rhododendron simsii HOM05D007606 ORTHO05D009600 3.4e-25 119.4 101 63.4
Atru.chr7.594 Acer truncatum HOM05D007606 ORTHO05D009600 4.4e-25 119.0 98 72.4
MSTRG.6226 Avicennia marina HOM05D007606 ORTHO05D009600 4.4e-25 119.0 65 87.7
HanXRQChr12g0365451 Helianthus annuus HOM05D007606 ORTHO05D009600 4.4e-25 119.0 100 65.0
Medtr4g127860 Medicago truncatula HOM05D007606 ORTHO05D009600 4.4e-25 119.0 101 66.3
Aa31LG3G13250 Aethionema arabicum HOM05D007606 ORTHO05D009600 5.7e-25 118.6 100 65.0
Carub.0008s1789 Capsella rubella HOM05D007606 ORTHO05D009600 5.7e-25 118.6 105 68.6
Lsat_1_v5_gn_8_67821 Lactuca sativa HOM05D007606 ORTHO05D009600 5.7e-25 118.6 101 62.4
TAR383G0717 Trochodendron aralioides HOM05D007606 ORTHO05D009600 7.5e-25 118.2 97 73.2
FAN07G2281 Fragaria x ananassa HOM05D007606 ORTHO05D009600 9.8e-25 117.9 98 67.3
Nn5g27171 Nelumbo nucifera HOM05D007606 ORTHO05D009600 9.8e-25 117.9 96 65.6
CANSAT11G0497 Cannabis sativa HOM05D007606 ORTHO05D009600 1.3e-24 117.5 96 65.6
Sp6g19090 Schrenkiella parvula HOM05D007606 ORTHO05D009600 1.3e-24 117.5 101 66.3
Lj5P601T23 Lonicera japonica HOM05D007606 ORTHO05D009600 3.7e-24 115.9 96 70.8
TWI32G0742 Tripterygium wilfordii HOM05D007606 ORTHO05D009600 3.7e-24 115.9 99 66.7
Aqoxy7G03025 Aquilegia oxysepala HOM05D007606 ORTHO05D009600 6.4e-24 115.2 96 64.6
FAN17G2268 Fragaria x ananassa HOM05D007606 ORTHO05D009600 6.4e-24 115.2 98 65.3
Glyma.13G097200 Glycine max HOM05D007606 ORTHO05D009600 6.4e-24 115.2 100 65.0
BcaC04g19971 Brassica carinata HOM05D007606 ORTHO05D009600 1.4e-23 114.0 102 60.8
C09p49270 Brassica napus HOM05D007606 ORTHO05D009600 1.4e-23 114.0 102 60.8
BolC9t57778H Brassica oleracea HOM05D007606 ORTHO05D009600 1.4e-23 114.0 102 60.8
COL.COLO4_37736 Corchorus olitorius HOM05D007606 ORTHO05D009600 1.4e-23 114.0 98 68.4
Gohir.D08G193500 Gossypium hirsutum HOM05D007606 ORTHO05D009600 1.8e-23 113.6 98 68.4
AT5G57370 Arabidopsis thaliana HOM05D007606 ORTHO05D009600 3.2e-23 112.8 99 64.6
Ciclev10009582m.g Citrus clementina HOM05D007606 ORTHO05D009600 3.2e-23 112.8 104 69.2
Hund26341 Selenicereus undatus HOM05D007606 ORTHO05D009600 3.2e-23 112.8 106 63.2
CSS0005882 Camellia sinensis var. sinensis HOM05D007606 ORTHO05D009600 7.0e-23 111.7 106 67.9
Hma1.2p1_1025F.1_g249400 Hydrangea macrophylla HOM05D007606 ORTHO05D009600 1.2e-22 110.9 67 80.6
BolC2t07555H Brassica oleracea HOM05D007606 ORTHO05D009600 3.5e-22 109.4 98 63.3
Gorai.004G203800 Gossypium raimondii HOM05D007606 ORTHO05D009600 3.5e-22 109.4 99 66.7
CARHR271170 Cardamine hirsuta HOM05D007606 ORTHO05D009600 5.9e-22 108.6 106 60.4
Gohir.A08G174900 Gossypium hirsutum HOM05D007606 ORTHO05D009600 1.3e-21 107.5 103 64.1
BcaC03g14159 Brassica carinata HOM05D007606 ORTHO05D009600 2.3e-21 106.7 98 62.2
SEGI_36552 Sequoiadendron giganteum HOM05D007606 ORTHO05D009600 3.0e-21 106.3 96 65.6
HanXRQChr08g0212621 Helianthus annuus HOM05D007606 ORTHO05D009600 3.9e-21 105.9 99 58.6
Phvul.003G144300 Phaseolus vulgaris HOM05D007606 ORTHO05D009600 3.9e-21 105.9 100 60.0
SHI02893 Sapria himalayana HOM05D007606 ORTHO05D009600 3.9e-21 105.9 100 58.0
Psat4g012880 Pisum sativum HOM05D007606 ORTHO05D009600 5.0e-21 105.5 68 79.4
BcaB05g22341 Brassica carinata HOM05D007606 ORTHO05D009600 5.6e-20 102.1 99 60.6
Duzib168G1965 Durio zibethinus HOM05D007606 ORTHO05D009600 9.5e-20 101.3 98 63.3
PSO339G0750 Papaver somniferum HOM05D007606 ORTHO05D009600 9.5e-20 101.3 97 58.8
A02p08550 Brassica napus HOM05D007606 ORTHO05D009600 1.2e-19 100.9 66 77.3
BraA02t05924Z Brassica rapa HOM05D007606 ORTHO05D009600 1.2e-19 100.9 66 77.3
Mapoly0026s0023 Marchantia polymorpha HOM05D007606 ORTHO05D009600 1.2e-19 100.9 97 56.7
C02p14290 Brassica napus HOM05D007606 ORTHO05D009600 1.6e-19 100.5 98 60.2
Os02g0461600 Oryza sativa ssp. japonica HOM05D007606 ORTHO05D009600 1.6e-19 100.5 89 62.9
GSVIVG01029223001 Vitis vinifera HOM05D007606 ORTHO05D009600 2.8e-19 99.8 63 79.4
HPP92_010764 Vanilla planifolia HOM05D007606 ORTHO05D009600 4.7e-19 99.0 106 55.7
Lalb_Chr13g0300161 Lupinus albus HOM05D007606 ORTHO05D009600 1.8e-18 97.1 100 57.0
A10p14850 Brassica napus HOM05D007606 ORTHO05D009600 3.1e-18 96.3 62 77.4
BraA10t43563Z Brassica rapa HOM05D007606 ORTHO05D009600 3.1e-18 96.3 62 77.4
FAN12G2299 Fragaria x ananassa HOM05D007606 ORTHO05D009600 3.1e-18 96.3 84 65.5
arahy.Tifrunner.gnm1.ann1.TB3R4X Arachis hypogaea HOM05D007606 ORTHO05D009600 6.8e-18 95.1 89 61.8
Thecc.09G175900 Theobroma cacao HOM05D007606 ORTHO05D009600 6.8e-18 95.1 98 60.2
Zm00001eb327770 Zea mays HOM05D007606 ORTHO05D009600 1.2e-17 94.4 70 70.0
CBR_g51476 Chara braunii HOM05D007606 ORTHO05D009600 1.5e-17 94.0 62 77.4
BcaB08g36096 Brassica carinata HOM05D007606 ORTHO05D009600 7.5e-17 91.7 66 74.2
AagrBONN_evm.TU.Sc2ySwM_362.441 Anthoceros agrestis HOM05D007606 ORTHO05D009600 1.7e-16 90.5 96 54.2
Pp3c7_10050 Physcomitrium patens HOM05D007606 ORTHO05D009600 2.2e-16 90.1 96 55.2
AUR62021308 Chenopodium quinoa HOM05D007606 ORTHO05D009600 3.7e-16 89.4 51 86.3
Ca_21234_v3 Cicer arietinum L. HOM05D007606 ORTHO05D009600 1.1e-15 87.8 51 84.3
SMO358G0723 Selaginella moellendorffii HOM05D007606 ORTHO05D009600 2.4e-15 86.7 60 71.7
FAN22G0657 Fragaria x ananassa HOM05D007606 ORTHO05D009600 4.1e-15 85.9 84 59.5
Cre10.g465950 Chlamydomonas reinhardtii HOM05D007606 ORTHO05D009600 6.4e-08 62.0 87 44.8


User provided reference genes

Program Settings