Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G309.10 Capsicum annuum HOM05D000009 ORTHO05D028466 2.3e-48 195.3 102 100.0
CAN.G1848.5 Capsicum annuum HOM05D000009 ORTHO05D000008 1.5e-26 122.9 190 43.7
CAN.G631.62 Capsicum annuum HOM05D000009 ORTHO05D000008 2.8e-25 118.6 165 48.5
CAN.G1358.6 Capsicum annuum HOM05D000009 ORTHO05D000008 3.6e-25 118.2 189 42.3
CAN.G1524.10 Capsicum annuum HOM05D000009 ORTHO05D000008 3.6e-25 118.2 72 83.3
CAN.G309.40 Capsicum annuum HOM05D000009 ORTHO05D000008 4.0e-24 114.8 190 43.7
CAN.G1887.3 Capsicum annuum HOM05D000009 ORTHO05D000008 5.2e-24 114.4 190 41.6
CAN.G1149.3 Capsicum annuum HOM05D000009 ORTHO05D000008 8.9e-24 113.6 71 78.9
CAN.G2377.1 Capsicum annuum HOM05D000009 ORTHO05D000008 8.9e-24 113.6 190 43.2
CAN.G3750.2 Capsicum annuum HOM05D000009 ORTHO05D000008 8.9e-24 113.6 190 43.2
CAN.G631.57 Capsicum annuum HOM05D000009 ORTHO05D000008 8.9e-24 113.6 68 79.4
CAN.G182.10 Capsicum annuum HOM05D000009 ORTHO05D000008 2.6e-23 112.1 68 80.9
CAN.G525.34 Capsicum annuum HOM05D000009 ORTHO05D000008 4.4e-23 111.3 69 76.8
PGSC0003DMG400007344 Solanum tuberosum HOM05D000009 ORTHO05D000008 5.7e-23 110.9 181 42.5
CAN.G631.55 Capsicum annuum HOM05D000009 ORTHO05D000008 7.5e-23 110.5 178 44.9
CAN.G1848.4 Capsicum annuum HOM05D000009 ORTHO05D000008 1.3e-22 109.8 190 42.6
CAN.G1632.11 Capsicum annuum HOM05D000009 ORTHO05D000008 2.8e-22 108.6 72 77.8
CAN.G309.31 Capsicum annuum HOM05D000009 ORTHO05D000008 8.3e-22 107.1 191 40.8
Nitab4.5_0006572g0010 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.8e-21 105.9 190 41.1
CAN.G1647.4 Capsicum annuum HOM05D000009 ORTHO05D000008 2.4e-21 105.5 174 42.5
CAN.G1524.11 Capsicum annuum HOM05D000009 ORTHO05D000008 5.4e-21 104.4 203 40.9
CAN.G1887.6 Capsicum annuum HOM05D000009 ORTHO05D000008 5.4e-21 104.4 72 75.0
CAN.G309.43 Capsicum annuum HOM05D000009 ORTHO05D000008 5.4e-21 104.4 195 39.5
PGSC0003DMG400014047 Solanum tuberosum HOM05D000009 ORTHO05D000008 5.4e-21 104.4 185 41.1
CAN.G553.4 Capsicum annuum HOM05D000009 ORTHO05D000008 2.0e-20 102.4 191 40.3
Peaxi162Scf01090g00130 Petunia axillaris HOM05D000009 ORTHO05D000008 4.5e-20 101.3 72 75.0
PGSC0003DMG400018693 Solanum tuberosum HOM05D000009 ORTHO05D000008 4.5e-20 101.3 190 40.0
Nitab4.5_0000613g0070 Nicotiana tabacum HOM05D000009 ORTHO05D000008 5.9e-20 100.9 190 40.0
Nitab4.5_0005589g0010 Nicotiana tabacum HOM05D000009 ORTHO05D000008 7.8e-20 100.5 189 40.2
Nitab4.5_0011718g0030 Nicotiana tabacum HOM05D000009 ORTHO05D000008 7.8e-20 100.5 189 39.7
CAN.G1632.4 Capsicum annuum HOM05D000009 ORTHO05D000008 1.0e-19 100.1 70 75.7
Nitab4.5_0001107g0110 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.0e-19 100.1 190 38.9
Nitab4.5_0002914g0120 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.3e-19 99.8 190 39.5
PGSC0003DMG400027407 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.3e-19 99.8 178 42.1
CAN.G309.26 Capsicum annuum HOM05D000009 ORTHO05D000008 1.7e-19 99.4 75 69.3
Solyc08g007630.1 Solanum lycopersicum HOM05D000009 ORTHO05D000008 1.7e-19 99.4 189 39.7
Sopen11g025550 Solanum pennellii HOM05D000009 ORTHO05D000008 1.7e-19 99.4 181 39.8
Nitab4.5_0005589g0020 Nicotiana tabacum HOM05D000009 ORTHO05D000008 2.3e-19 99.0 190 38.9
Nitab4.5_0000227g0100 Nicotiana tabacum HOM05D000009 ORTHO05D000008 2.9e-19 98.6 181 39.8
Sopen11g021420 Solanum pennellii HOM05D000004 ORTHO05D000002 2.9e-19 98.6 140 47.1
PGSC0003DMG401018576 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.9e-19 98.6 189 39.2
PGSC0003DMG401027402 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.9e-19 98.6 190 38.4
PGSC0003DMG402027402 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.9e-19 98.6 190 38.4
CAN.G1524.13 Capsicum annuum HOM05D000009 ORTHO05D000008 5.0e-19 97.8 61 77.0
Nitab4.5_0011718g0040 Nicotiana tabacum HOM05D000009 ORTHO05D000008 5.0e-19 97.8 190 40.0
CAN.G309.28 Capsicum annuum HOM05D000009 ORTHO05D000008 6.6e-19 97.4 72 73.6
Nitab4.5_0010845g0040 Nicotiana tabacum HOM05D000009 ORTHO05D000008 6.6e-19 97.4 190 38.9
PGSC0003DMG400019667 Solanum tuberosum HOM05D000009 ORTHO05D000008 6.6e-19 97.4 184 39.7
Sopen11g029660 Solanum pennellii HOM05D000009 ORTHO05D000008 8.6e-19 97.1 181 39.8
Sopen08g003590 Solanum pennellii HOM05D000009 ORTHO05D000008 1.1e-18 96.7 189 38.6
CAN.G1632.8 Capsicum annuum HOM05D000009 ORTHO05D000008 1.5e-18 96.3 68 72.1
Nitab4.5_0000227g0330 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.5e-18 96.3 190 38.9
PGSC0003DMG402018576 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.5e-18 96.3 190 40.0
Solyc11g071420.3 Solanum lycopersicum HOM05D000009 ORTHO05D000008 1.9e-18 95.9 190 37.9
Sopen11g027000 Solanum pennellii HOM05D000009 ORTHO05D000008 1.9e-18 95.9 185 39.5
Nitab4.5_0009634g0010 Nicotiana tabacum HOM05D000009 ORTHO05D000008 4.3e-18 94.7 191 37.2
Sopen11g029090 Solanum pennellii HOM05D000009 ORTHO05D000008 4.3e-18 94.7 190 37.4
CAN.G1218.19 Capsicum annuum HOM05D000009 ORTHO05D000008 7.3e-18 94.0 72 69.4
CAN.G1524.16 Capsicum annuum HOM05D001475 ORTHO05D001525 7.3e-18 94.0 97 56.7
CAN.G426.5 Capsicum annuum HOM05D000009 ORTHO05D000008 7.3e-18 94.0 106 57.5
Nitab4.5_0014415g0020 Nicotiana tabacum HOM05D000009 ORTHO05D000008 7.3e-18 94.0 189 38.1
Nitab4.5_0000023g0520 Nicotiana tabacum HOM05D000009 ORTHO05D000008 9.5e-18 93.6 190 38.4
Peaxi162Scf00773g00123 Petunia axillaris HOM05D000009 ORTHO05D000008 9.5e-18 93.6 74 71.6
CAN.G742.12 Capsicum annuum HOM05D000009 ORTHO05D000008 1.2e-17 93.2 95 57.9
Nitab4.5_0000075g0120 Nicotiana tabacum HOM05D000009 ORTHO05D000008 2.1e-17 92.4 190 38.4
PGSC0003DMG400002980 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.1e-17 92.4 72 69.4
PGSC0003DMG401018696 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.1e-17 92.4 190 37.9
Sopen11g030120 Solanum pennellii HOM05D000009 ORTHO05D000008 2.8e-17 92.0 189 38.1
CAN.G742.4 Capsicum annuum HOM05D000009 ORTHO05D000008 4.7e-17 91.3 72 73.6
Solyc11g040410.1 Solanum lycopersicum HOM05D000009 ORTHO05D028466 4.7e-17 91.3 121 49.6
Nitab4.5_0006572g0020 Nicotiana tabacum HOM05D000009 ORTHO05D000008 6.1e-17 90.9 163 37.4
Sopen11g027060 Solanum pennellii HOM05D000009 ORTHO05D000008 6.1e-17 90.9 181 38.1
Sopen11g028680 Solanum pennellii HOM05D000009 ORTHO05D000008 8.0e-17 90.5 72 69.4
Solyc11g071430.1 Solanum lycopersicum HOM05D000009 ORTHO05D000008 1.4e-16 89.7 71 69.0
Nitab4.5_0002355g0030 Nicotiana tabacum HOM05D000009 ORTHO05D000008 2.3e-16 89.0 190 37.4
Nitab4.5_0000890g0110 Nicotiana tabacum HOM05D000009 ORTHO05D000008 4.0e-16 88.2 191 37.2
Solyc11g065780.3 Solanum lycopersicum HOM05D000009 ORTHO05D000008 1.5e-15 86.3 72 65.3
Nitab4.5_0005589g0050 Nicotiana tabacum HOM05D000009 ORTHO05D000008 2.6e-15 85.5 72 69.4
Nitab4.5_0000023g0540 Nicotiana tabacum HOM05D000009 ORTHO05D000008 3.4e-15 85.1 181 37.6
Peaxi162Scf00757g00423 Petunia axillaris HOM05D000009 ORTHO05D000008 4.4e-15 84.7 75 65.3
PGSC0003DMG400009455 Solanum tuberosum HOM05D000009 ORTHO05D000008 5.8e-15 84.3 74 62.2
Sopen11g019490 Solanum pennellii HOM05D000009 ORTHO05D000008 1.3e-14 83.2 89 58.4
Peaxi162Scf63371g00001 Petunia axillaris HOM05D000009 ORTHO05D000008 1.7e-14 82.8 74 64.9
Nitab4.5_0004261g0010 Nicotiana tabacum HOM05D000009 ORTHO05D000008 2.2e-14 82.4 179 38.5
Peaxi162Scf00152g01127 Petunia axillaris HOM05D000009 ORTHO05D000008 2.2e-14 82.4 70 68.6
CAN.G742.22 Capsicum annuum HOM05D000009 ORTHO05D000008 2.9e-14 82.0 64 68.8
Nitab4.5_0000227g0380 Nicotiana tabacum HOM05D000009 ORTHO05D000008 2.9e-14 82.0 167 38.9
Sopen11g028360 Solanum pennellii HOM05D000009 ORTHO05D000008 4.9e-14 81.3 73 63.0
Nitab4.5_0003550g0020 Nicotiana tabacum HOM05D000009 ORTHO05D000008 6.4e-14 80.9 71 62.0
PGSC0003DMG400019669 Solanum tuberosum HOM05D000009 ORTHO05D000008 6.4e-14 80.9 73 61.6
Sopen11g028610 Solanum pennellii HOM05D000009 ORTHO05D000008 8.3e-14 80.5 73 63.0
CAN.G1887.8 Capsicum annuum HOM05D000473 ORTHO05D000008 1.1e-13 80.1 145 40.0
Peaxi162Scf00757g00425 Petunia axillaris HOM05D000009 ORTHO05D000008 1.4e-13 79.7 60 75.0
Nitab4.5_0000023g0600 Nicotiana tabacum HOM05D000009 ORTHO05D028466 2.4e-13 79.0 65 66.2
Sopen09g016280 Solanum pennellii HOM05D000009 ORTHO05D000008 2.7e-12 75.5 142 41.5
Solyc11g069620.3 Solanum lycopersicum HOM05D000009 ORTHO05D000008 3.5e-12 75.1 73 60.3
Sopen11g028330 Solanum pennellii HOM05D000009 ORTHO05D000008 1.0e-11 73.6 73 58.9
PGSC0003DMG401027371 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.3e-11 72.4 67 58.2
Peaxi162Scf00637g00221 Petunia axillaris HOM05D000009 ORTHO05D000008 8.6e-11 70.5 72 55.6
Sopen11g020860 Solanum pennellii HOM05D000009 ORTHO05D000008 8.6e-11 70.5 158 34.2
Peaxi162Scf00071g00945 Petunia axillaris HOM05D000009 ORTHO05D000008 1.9e-10 69.3 186 32.8
Peaxi162Scf03637g00004 Petunia axillaris HOM05D000009 ORTHO05D000008 1.9e-10 69.3 71 56.3
Solyc11g068360.1 Solanum lycopersicum HOM05D000009 ORTHO05D000008 1.2e-09 66.6 72 50.0
Nitab4.5_0000013g0530 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.6e-09 66.2 108 41.7
Sopen11g027070 Solanum pennellii HOM05D000009 ORTHO05D000008 2.1e-09 65.9 71 52.1
CAN.G1149.6 Capsicum annuum HOM05D000009 ORTHO05D000008 1.1e-08 63.5 53 67.9
CAN.G1887.10 Capsicum annuum HOM05D000009 ORTHO05D000008 1.1e-08 63.5 46 71.7
CAN.G777.3 Capsicum annuum HOM05D000009 ORTHO05D028466 1.8e-08 62.8 38 81.6
Nitab4.5_0010433g0010 Nicotiana tabacum HOM05D000009 ORTHO05D000008 2.3e-08 62.4 190 28.4
Sopen11g029100 Solanum pennellii HOM05D000009 ORTHO05D000008 3.1e-08 62.0 100 45.0
Solyc11g072000.2 Solanum lycopersicum HOM05D000009 ORTHO05D000008 4.0e-08 61.6 100 45.0
CAN.G309.29 Capsicum annuum HOM05D000009 ORTHO05D000008 6.8e-08 60.8 44 72.7
CAN.G309.39 Capsicum annuum HOM05D000009 ORTHO05D000008 1.2e-07 60.1 42 71.4
Nitab4.5_0000762g0050 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.2e-07 60.1 103 41.7
CAN.G309.27 Capsicum annuum HOM05D000009 ORTHO05D000008 1.5e-07 59.7 102 41.2
CAN.G742.15 Capsicum annuum HOM05D000009 ORTHO05D000008 1.5e-07 59.7 100 45.0
Solyc11g064770.3 Solanum lycopersicum HOM05D000009 ORTHO05D000008 1.5e-07 59.7 149 30.2
COL.COLO4_12173 Corchorus olitorius HOM05D000009 ORTHO05D000008 2.0e-07 59.3 99 39.4
CAN.G1149.5 Capsicum annuum HOM05D000009 ORTHO05D000008 3.4e-07 58.5 65 56.9
Sopen11g024570 Solanum pennellii HOM05D000009 ORTHO05D000008 1.7e-06 56.2 76 44.7
Peaxi162Scf00857g00009 Petunia axillaris HOM05D000009 ORTHO05D000008 2.9e-06 55.5 96 40.6
Solyc11g042750.1 Solanum lycopersicum HOM05D000009 ORTHO05D000008 2.9e-06 55.5 27 96.3
PGSC0003DMG400018720 Solanum tuberosum HOM05D000009 ORTHO05D000008 3.7e-06 55.1 54 61.1
Peaxi162Scf03969g00001 Petunia axillaris HOM05D000009 ORTHO05D000008 4.9e-06 54.7 72 48.6


User provided reference genes

Program Settings