Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G300.5 Capsicum annuum HOM05D004087 ORTHO05D004787 1.2e-90 336.7 193 100.0
Nitab4.5_0000710g0070 Nicotiana tabacum HOM05D004087 ORTHO05D004787 1.3e-63 246.9 195 78.5
Solyc04g005120.3 Solanum lycopersicum HOM05D004087 ORTHO05D004787 2.5e-59 232.6 194 78.9
Sopen04g001140 Solanum pennellii HOM05D004087 ORTHO05D004787 1.6e-58 229.9 194 78.4
CiPaw.06G078300 Carya illinoinensis HOM05D004087 ORTHO05D004787 9.4e-43 177.6 181 57.5
Peaxi162Scf00187g00617 Petunia axillaris HOM05D004087 ORTHO05D004787 8.0e-42 174.5 108 89.8
Manes.05G094600 Manihot esculenta HOM05D004087 ORTHO05D004787 1.2e-40 170.6 206 53.4
Potri.008G190900 Populus trichocarpa HOM05D004087 ORTHO05D004787 3.7e-39 165.6 193 54.4
Actinidia01168 Actinidia chinensis HOM05D004087 ORTHO05D004787 3.5e-37 159.1 209 52.6
Glyma.01G039100 Glycine max HOM05D004087 ORTHO05D004787 1.3e-36 157.1 145 60.0
Cpa.g.sc5.304 Carica papaya HOM05D004087 ORTHO05D004787 1.7e-36 156.8 202 50.0
PGSC0003DMG400001914 Solanum tuberosum HOM05D000067 ORTHO05D000097 2.3e-36 156.4 184 59.8
Gohir.D04G136500 Gossypium hirsutum HOM05D004087 ORTHO05D004787 5.0e-36 155.2 185 51.4
Gorai.012G120300 Gossypium raimondii HOM05D004087 ORTHO05D004787 5.0e-36 155.2 185 51.4
Haze_12080 Corylus avellana HOM05D004087 ORTHO05D004787 8.6e-36 154.5 137 62.8
Lalb_Chr05g0217411 Lupinus albus HOM05D004087 ORTHO05D004787 1.1e-35 154.1 145 62.1
COL.COLO4_36242 Corchorus olitorius HOM05D004087 ORTHO05D004787 3.3e-35 152.5 129 67.4
TAR622G0570 Trochodendron aralioides HOM05D004087 ORTHO05D004787 5.5e-35 151.8 139 59.7
Sabra08G0144800 Salix brachista HOM05D004087 ORTHO05D004787 9.5e-35 151.0 126 67.5
Cfa009049 Carpinus fangiana HOM05D004087 ORTHO05D004787 1.2e-34 150.6 141 59.6
GSVIVG01020122001 Vitis vinifera HOM05D004087 ORTHO05D004787 1.2e-34 150.6 184 52.2
VMungo1215G1106 Vigna mungo HOM05D004087 ORTHO05D004787 1.6e-34 150.2 101 76.2
Nitab4.5_0013199g0010 Nicotiana tabacum HOM05D004087 ORTHO05D004787 2.8e-34 149.4 145 69.0
Phvul.002G079300 Phaseolus vulgaris HOM05D004087 ORTHO05D004787 2.8e-34 149.4 195 49.7
Lj2g0011291 Lotus japonicus HOM05D004087 ORTHO05D004787 8.0e-34 147.9 197 51.3
Hma1.2p1_0289F.1_g114450 Hydrangea macrophylla HOM05D004087 ORTHO05D004787 3.0e-33 146.0 141 61.0
Ciclev10032809m.g Citrus clementina HOM05D004087 ORTHO05D004787 6.8e-33 144.8 188 47.9
Medtr5g037230 Medicago truncatula HOM05D004087 ORTHO05D004787 8.9e-33 144.4 153 52.9
TPR.G26706 Trifolium pratense HOM05D004087 ORTHO05D004787 8.9e-33 144.4 148 55.4
Eucgr.B02582 Eucalyptus grandis HOM05D004087 ORTHO05D004787 1.2e-32 144.1 191 50.3
Glyma.02G025600 Glycine max HOM05D004087 ORTHO05D004787 2.0e-32 143.3 196 49.5
Aqoxy3G03190 Aquilegia oxysepala HOM05D004087 ORTHO05D004787 7.5e-32 141.4 211 51.7
PGR119G1273 Punica granatum HOM05D004087 ORTHO05D004787 9.8e-32 141.0 105 67.6
arahy.Tifrunner.gnm1.ann1.0DC02M Arachis hypogaea HOM05D004087 ORTHO05D004787 1.7e-31 140.2 97 75.3
arahy.Tifrunner.gnm1.ann1.F53DZL Arachis hypogaea HOM05D004087 ORTHO05D004787 1.7e-31 140.2 97 75.3
Atru.chr11.1891 Acer truncatum HOM05D004087 ORTHO05D004787 4.9e-31 138.7 103 67.0
THA.LOC104822080 Tarenaya hassleriana HOM05D004087 ORTHO05D004787 2.4e-30 136.3 184 47.3
MBI01_g41231_MAGBIO Magnolia biondii HOM05D004087 ORTHO05D004787 5.4e-30 135.2 108 67.6
Psat2g117160 Pisum sativum HOM05D004087 ORTHO05D004787 5.4e-30 135.2 101 66.3
Rhsim12G0127500 Rhododendron simsii HOM05D004087 ORTHO05D004787 1.0e-28 131.0 109 67.0
PSO832G0995 Papaver somniferum HOM05D004087 ORTHO05D004787 1.7e-28 130.2 109 64.2
CARHR063040 Cardamine hirsuta HOM05D004087 ORTHO05D004787 2.3e-28 129.8 186 50.5
PSO591G0142 Papaver somniferum HOM05D004087 ORTHO05D004787 5.0e-28 128.6 106 65.1
Dinv24938 Davidia involucrata HOM05D004087 ORTHO05D004787 6.6e-28 128.3 95 70.5
Thhalv10019201m.g Eutrema salsugineum HOM05D004087 ORTHO05D004787 3.3e-27 125.9 183 51.4
Sp5g25060 Schrenkiella parvula HOM05D004087 ORTHO05D004787 4.3e-27 125.6 174 52.3
AL2G29180 Arabidopsis lyrata HOM05D004087 ORTHO05D004787 1.6e-26 123.6 93 67.7
AT1G69935 Arabidopsis thaliana HOM05D004087 ORTHO05D004787 4.7e-26 122.1 93 66.7
BcaB03g14773 Brassica carinata HOM05D004087 ORTHO05D004787 6.1e-26 121.7 93 65.6
C06p43810 Brassica napus HOM05D004087 ORTHO05D004787 1.0e-25 120.9 93 64.5
BraA07t31211Z Brassica rapa HOM05D004087 ORTHO05D004787 1.8e-25 120.2 121 60.3
Carub.0002s1665 Capsella rubella HOM05D004087 ORTHO05D004787 1.8e-25 120.2 93 66.7
A07p36390 Brassica napus HOM05D004087 ORTHO05D004787 2.3e-25 119.8 93 64.5
HanXRQChr17g0551501 Helianthus annuus HOM05D004087 ORTHO05D004787 4.0e-25 119.0 206 48.5
BcaC08g46444 Brassica carinata HOM05D004087 ORTHO05D004787 6.8e-25 118.2 182 44.0
BolC6t39453H Brassica oleracea HOM05D004087 ORTHO05D004787 6.8e-25 118.2 182 44.0
Ah.01g007120 Amaranthus hybridus HOM05D004087 ORTHO05D004787 7.5e-24 114.8 111 58.6
Nn1g03866 Nelumbo nucifera HOM05D004087 ORTHO05D004787 3.7e-23 112.5 179 46.4
Sc05g0005570 Simmondsia chinensis HOM05D004087 ORTHO05D004787 6.4e-23 111.7 87 69.0
Lsat_1_v5_gn_7_84781 Lactuca sativa HOM05D004087 ORTHO05D004787 2.4e-22 109.8 143 56.6
Gohir.D02G203142 Gossypium hirsutum HOM05D003497 ORTHO05D004787 5.4e-22 108.6 89 64.0
Nn5g30675 Nelumbo nucifera HOM05D004087 ORTHO05D004787 5.4e-22 108.6 131 53.4
GSVIVG01037047001 Vitis vinifera HOM05D004087 ORTHO05D004787 5.4e-22 108.6 190 44.7
Eucgr.G01187 Eucalyptus grandis HOM05D004087 ORTHO05D004787 7.0e-22 108.2 87 65.5
TAR628G1056 Trochodendron aralioides HOM05D000194 ORTHO05D000069 7.0e-22 108.2 87 63.2
Atru.chr5.2274 Acer truncatum HOM05D004087 ORTHO05D004787 9.2e-22 107.8 89 62.9
Aqoxy6G02440 Aquilegia oxysepala HOM05D004087 ORTHO05D004787 9.2e-22 107.8 89 62.9
CSS0031122 Camellia sinensis var. sinensis HOM05D004087 ORTHO05D004787 9.2e-22 107.8 203 37.4
Cfa004696 Carpinus fangiana HOM05D004087 ORTHO05D004787 9.2e-22 107.8 85 63.5
CiPaw.05G021000 Carya illinoinensis HOM05D004087 ORTHO05D004787 1.2e-21 107.5 87 63.2
COL.COLO4_32481 Corchorus olitorius HOM05D004087 ORTHO05D004787 1.2e-21 107.5 112 52.7
Hma1.2p1_0661F.1_g198070 Hydrangea macrophylla HOM05D004087 ORTHO05D004787 1.2e-21 107.5 178 41.0
Gorai.005G229700 Gossypium raimondii HOM05D003497 ORTHO05D003964 1.6e-21 107.1 89 62.9
Manes.10G087100 Manihot esculenta HOM05D004087 ORTHO05D004787 1.6e-21 107.1 87 63.2
Oeu028917.1 Olea europaea HOM05D004087 ORTHO05D004787 1.6e-21 107.1 89 60.7
Potri.001G289600 Populus trichocarpa HOM05D004087 ORTHO05D004787 1.6e-21 107.1 87 64.4
BcaNung04672 Brassica carinata HOM05D004087 ORTHO05D004787 2.0e-21 106.7 116 63.8
Glyma.01G241400 Glycine max HOM05D004087 ORTHO05D004787 2.0e-21 106.7 90 62.2
ECA236G0105 Erigeron canadensis HOM05D004087 ORTHO05D004787 2.7e-21 106.3 107 56.1
TWI59G0284 Tripterygium wilfordii HOM05D004087 ORTHO05D004787 2.7e-21 106.3 85 64.7
CANSAT25G1673 Cannabis sativa HOM05D004087 ORTHO05D004787 3.5e-21 105.9 109 53.2
Gohir.A03G180900 Gossypium hirsutum HOM05D003497 ORTHO05D003964 3.5e-21 105.9 89 62.9
Hund06503 Selenicereus undatus HOM05D004087 ORTHO05D004787 3.5e-21 105.9 89 60.7
THA.LOC104807209 Tarenaya hassleriana HOM05D004087 ORTHO05D004787 3.5e-21 105.9 112 53.6
Prupe.8G150800 Prunus persica HOM05D004087 ORTHO05D004787 4.6e-21 105.5 112 54.5
Ciclev10029333m.g Citrus clementina HOM05D004087 ORTHO05D004787 6.0e-21 105.1 110 53.6
Cc02_g20080 Coffea canephora HOM05D004087 ORTHO05D004787 7.8e-21 104.8 87 60.9
Duzib132G0587 Durio zibethinus HOM05D004087 ORTHO05D004787 1.0e-20 104.4 87 62.1
QL11p029242 Quercus lobata HOM05D004087 ORTHO05D004787 1.0e-20 104.4 107 52.3
RcHm_v2.0_Chr6g0248281 Rosa chinensis HOM05D004087 ORTHO05D004787 1.0e-20 104.4 112 52.7
Hund06504 Selenicereus undatus HOM05D004087 ORTHO05D004787 1.0e-20 104.4 184 46.2
AL7G17680 Arabidopsis lyrata HOM05D004087 ORTHO05D004787 1.3e-20 104.0 89 62.9
AT4G33780 Arabidopsis thaliana HOM05D004087 ORTHO05D004787 1.3e-20 104.0 89 62.9
Carub.0007s0665 Capsella rubella HOM05D004087 ORTHO05D004787 1.3e-20 104.0 87 65.5
PGR042G2373 Punica granatum HOM05D004087 ORTHO05D004787 1.3e-20 104.0 87 60.9
Sed0019763 Sechium edule HOM05D004087 ORTHO05D004787 1.3e-20 104.0 173 46.8
Thecc.02G120300 Theobroma cacao HOM05D004087 ORTHO05D004787 1.3e-20 104.0 87 62.1
Aa31sc355G20 Aethionema arabicum HOM05D004087 ORTHO05D004787 1.7e-20 103.6 85 65.9
ATR0739G081 Amborella trichopoda HOM05D004087 ORTHO05D004787 1.7e-20 103.6 193 44.0
CARHR241870 Cardamine hirsuta HOM05D004087 ORTHO05D004787 1.7e-20 103.6 177 46.3
CDE06G2321 Ceratophyllum demersum HOM05D001904 ORTHO05D001854 1.7e-20 103.6 85 63.5
FvH4_2g03150 Fragaria vesca HOM05D004087 ORTHO05D004787 1.7e-20 103.6 85 63.5
FAN15G0324 Fragaria x ananassa HOM05D004087 ORTHO05D004787 1.7e-20 103.6 85 63.5
FAN20G2318 Fragaria x ananassa HOM05D004087 ORTHO05D004787 1.7e-20 103.6 85 63.5
PSO017G3065 Papaver somniferum HOM05D004087 ORTHO05D004787 1.7e-20 103.6 87 59.8
PSO170G3120 Papaver somniferum HOM05D004087 ORTHO05D004787 1.7e-20 103.6 87 59.8
Sp7g31520 Schrenkiella parvula HOM05D004087 ORTHO05D004787 1.7e-20 103.6 89 62.9
CDE04G2047 Ceratophyllum demersum HOM05D004087 ORTHO05D004787 2.3e-20 103.2 110 55.5
Thhalv10026262m.g Eutrema salsugineum HOM05D004087 ORTHO05D004787 2.3e-20 103.2 87 64.4
Phvul.002G050600 Phaseolus vulgaris HOM05D004087 ORTHO05D004787 2.3e-20 103.2 89 60.7
BcaC09g52189 Brassica carinata HOM05D000477 ORTHO05D000338 3.0e-20 102.8 89 62.9
C01p04920 Brassica napus HOM05D004087 ORTHO05D004787 3.0e-20 102.8 89 62.9
BolC1t00476H Brassica oleracea HOM05D004087 ORTHO05D004787 3.0e-20 102.8 89 62.9
ClCG02G007130 Citrullus lanatus HOM05D004087 ORTHO05D004787 3.0e-20 102.8 181 46.4
Migut.B00471 Erythranthe guttata HOM05D004087 ORTHO05D004787 3.0e-20 102.8 89 58.4
FAN24G1045 Fragaria x ananassa HOM05D004087 ORTHO05D004787 3.0e-20 102.8 87 62.1
FAN27G0771 Fragaria x ananassa HOM05D004087 ORTHO05D004787 3.0e-20 102.8 85 63.5
Actinidia00355 Actinidia chinensis HOM05D004087 ORTHO05D004787 3.9e-20 102.4 137 44.5
BraA01t00439Z Brassica rapa HOM05D004087 ORTHO05D004787 3.9e-20 102.4 87 64.4
Dinv09536 Davidia involucrata HOM05D004087 ORTHO05D004787 5.0e-20 102.1 176 38.6
Peaxi162Scf00016g03121 Petunia axillaris HOM05D004087 ORTHO05D004787 5.0e-20 102.1 92 56.5
BcaNung02921 Brassica carinata HOM05D004087 ORTHO05D004787 6.6e-20 101.7 87 63.2
A03p62320 Brassica napus HOM05D004087 ORTHO05D004787 6.6e-20 101.7 87 63.2
C07p59880 Brassica napus HOM05D004087 ORTHO05D004787 6.6e-20 101.7 87 63.2
BolC7t46432H Brassica oleracea HOM05D004087 ORTHO05D004787 6.6e-20 101.7 87 63.2
BraA03t15307Z Brassica rapa HOM05D004087 ORTHO05D004787 6.6e-20 101.7 87 63.2
Solyc01g106810.4 Solanum lycopersicum HOM05D004087 ORTHO05D004787 6.6e-20 101.7 89 56.2
Sopen01g049120 Solanum pennellii HOM05D004087 ORTHO05D004787 6.6e-20 101.7 89 56.2
BcaNung04326 Brassica carinata HOM05D004087 ORTHO05D004787 1.9e-19 100.1 85 63.5
PGSC0003DMG400025835 Solanum tuberosum HOM05D004087 ORTHO05D004787 1.9e-19 100.1 86 58.1
Ca_28186_v3 Cicer arietinum L. HOM05D004087 ORTHO05D004787 2.5e-19 99.8 78 66.7
CsaV3_7G007690 Cucumis sativus L. HOM05D004087 ORTHO05D004787 5.6e-19 98.6 173 47.4
MBI16_g37623_MAGBIO Magnolia biondii HOM05D004087 ORTHO05D004787 9.5e-19 97.8 85 61.2
Nitab4.5_0000772g0090 Nicotiana tabacum HOM05D004087 ORTHO05D004787 1.2e-18 97.4 110 59.1
Duzib268G0252 Durio zibethinus HOM05D004087 ORTHO05D004787 4.7e-18 95.5 155 47.7
QL03p066700 Quercus lobata HOM05D004087 ORTHO05D004787 1.8e-17 93.6 196 41.3
Sabra16G0181200 Salix brachista HOM05D004087 ORTHO05D004787 3.1e-17 92.8 113 49.6
AUR62027025 Chenopodium quinoa HOM05D003497 ORTHO05D003964 4.0e-17 92.4 99 55.6
vmacro16306 Vaccinium macrocarpon HOM05D004087 ORTHO05D004787 6.8e-17 91.7 74 66.2
Zm00001eb009500 Zea mays HOM05D004087 ORTHO05D004787 2.6e-16 89.7 85 54.1
BcaC03g14363 Brassica carinata HOM05D004087 ORTHO05D004787 4.4e-16 89.0 87 60.9
Nitab4.5_0009103g0030 Nicotiana tabacum HOM05D004087 ORTHO05D004787 1.3e-15 87.4 167 44.3
BolC2t07908H Brassica oleracea HOM05D004087 ORTHO05D004787 6.4e-15 85.1 72 66.7
MD05G1106700 Malus domestica HOM05D004087 ORTHO05D004787 1.1e-14 84.3 80 56.2
DCAR_021942 Daucus carota HOM05D004087 ORTHO05D004787 2.1e-13 80.1 229 38.0
SalBow6G0931 Salvia bowleyana HOM05D004087 ORTHO05D004787 2.7e-13 79.7 73 53.4
SGA_v2.0_scaffold32G12983 Striga asiatica HOM05D004087 ORTHO05D004787 3.5e-13 79.3 69 56.5
EL10Ac9g22175 Beta vulgaris HOM05D004087 ORTHO05D004787 5.1e-12 75.5 188 36.2
C02p17780 Brassica napus HOM05D004087 ORTHO05D004787 2.5e-11 73.2 61 65.6
A01p04540 Brassica napus HOM05D004087 ORTHO05D004787 3.3e-11 72.8 60 66.7
VMungo1215G2093 Vigna mungo HOM05D004087 ORTHO05D004787 5.6e-11 72.0 60 65.0
MD10G1111500 Malus domestica HOM05D004087 ORTHO05D004787 9.5e-11 71.2 67 59.7
MELO3C018531.2 Cucumis melo HOM05D004087 ORTHO05D004787 4.7e-10 68.9 60 58.3
Gohir.A13G047950 Gossypium hirsutum HOM05D004087 ORTHO05D004787 4.7e-10 68.9 62 59.7
TWI36G1524 Tripterygium wilfordii HOM05D004087 ORTHO05D004787 1.4e-09 67.4 119 41.2
AagrBONN_evm.TU.Sc2ySwM_344.3821 Anthoceros agrestis HOM05D004087 ORTHO05D004787 3.1e-09 66.2 84 41.7
Gohir.A04G096700 Gossypium hirsutum HOM05D004087 ORTHO05D004787 4.0e-09 65.9 118 40.7
Mapoly0011s0173 Marchantia polymorpha HOM05D004087 ORTHO05D004787 4.0e-09 65.9 120 31.7
unitig_0.g632 Utricularia gibba HOM05D004087 ORTHO05D004787 5.2e-09 65.5 75 58.7
vmacro01944 Vaccinium macrocarpon HOM05D004087 ORTHO05D004787 1.7e-07 60.5 74 45.9
CSS0038746 Camellia sinensis var. sinensis HOM05D004087 ORTHO05D004787 1.4e-06 57.4 134 46.3
AUR62030868 Chenopodium quinoa HOM05D004087 ORTHO05D004787 9.2e-06 54.7 91 44.0


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